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Hierarchical classification of hydrolases catalytic sites.
- Source :
-
Bioinformatics (Oxford, England) [Bioinformatics] 2006 Oct 15; Vol. 22 (20), pp. 2574-6. Date of Electronic Publication: 2006 Jul 28. - Publication Year :
- 2006
-
Abstract
- Unlabelled: Universal ontology of catalytic sites is required to systematize enzyme catalytic sites, their evolution as well as relations between catalytic sites and protein families, organisms and chemical reactions. Here we present a classification of hydrolases catalytic sites based on hierarchical organization. The web-accessible database provides information on the catalytic sites, protein folds, EC numbers and source organisms of the enzymes and includes software allowing for analysis and visualization of the relations between them.<br />Availability: http://www.enzyme.chem.msu.ru/hcs/
- Subjects :
- Amino Acid Sequence
Binding Sites
Catalysis
Computer Simulation
Database Management Systems
Enzyme Activation
Information Storage and Retrieval methods
Molecular Sequence Data
Protein Binding
Databases, Protein
Hydrolases chemistry
Hydrolases classification
Models, Molecular
User-Computer Interface
Subjects
Details
- Language :
- English
- ISSN :
- 1367-4811
- Volume :
- 22
- Issue :
- 20
- Database :
- MEDLINE
- Journal :
- Bioinformatics (Oxford, England)
- Publication Type :
- Academic Journal
- Accession number :
- 16877756
- Full Text :
- https://doi.org/10.1093/bioinformatics/btl413