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Cell-based screening and validation of human novel genes associated with cell viability.
- Source :
-
Journal of biomolecular screening [J Biomol Screen] 2006 Jun; Vol. 11 (4), pp. 369-76. Date of Electronic Publication: 2006 Apr 28. - Publication Year :
- 2006
-
Abstract
- In the present study, a cell-based high-throughput assay is established to identify novel human genes associated with cell viability. The assay relies on the down-regulation of Renilla luciferase (pRL) activity in a 96-well format. In addition, 2-color fluorescence probes were used to distinguish living and dead cells. As the positive control, the authors used the expression vectors encoding Bax, TNFRSF1A, and TAJ, which were widely known to effectively induce programmed cell death. They screened 409 novel genes (including alternative mRNA splicing forms) cloned in their laboratory and found that 39 genes could significantly down-regulate pRL activity. A subsequent fluorescence-based assay revealed that 4 of the 39 genes (PIP5KL1, OLFM1, RNF122, FAM26B) were associated with cell viability. Further function assays validated that the 4 genes were able to induce both necrosis and apoptosis. These results therefore indicate that a rapid and effective screening system has been developed, which should shed light on some functions of novel genes.
- Subjects :
- Apoptosis genetics
Cell Line
Computational Biology
Flow Cytometry
Fluorescent Dyes
Gene Library
Genetic Testing statistics & numerical data
Genome, Human
Humans
Luciferases, Renilla genetics
Membrane Potentials
Microscopy, Fluorescence
Mitochondria metabolism
Necrosis
Cell Survival genetics
Genetic Testing methods
Subjects
Details
- Language :
- English
- ISSN :
- 1087-0571
- Volume :
- 11
- Issue :
- 4
- Database :
- MEDLINE
- Journal :
- Journal of biomolecular screening
- Publication Type :
- Academic Journal
- Accession number :
- 16751333
- Full Text :
- https://doi.org/10.1177/1087057106286654