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Ab initio simulations of desorption and reactivity of glycine at a water-pyrite interface at "iron-sulfur world" prebiotic conditions.

Authors :
Pollet R
Boehme C
Marx D
Source :
Origins of life and evolution of the biosphere : the journal of the International Society for the Study of the Origin of Life [Orig Life Evol Biosph] 2006 Aug; Vol. 36 (4), pp. 363-79. Date of Electronic Publication: 2006 Mar 30.
Publication Year :
2006

Abstract

Glycine at the interface of a pyrite surface (001) FeS2, and bulk water at high pressure and temperature conditions relevant to the "iron-sulfur world" scenario of the origin of life is investigated by theoretical means. Car-Parrinello molecular dynamics is used in order to study the desorption process of the zwitterionic form of this amino acid using two different adsorption modes, where either only one or both oxygens of the carboxylate group are anchored to surface iron atoms. It is found that the formation of stabilizing hydrogen bonds plays a key role in the detachment process, leading to longer retention times for the bidentate adsorption mode. In addition, the chemical reactivity of this heterogeneous system is probed by calculating the Fukui functions as site-specific reactivity indices. The most prominent targets for both nucleophilic and electrophilic reactions to occur are surface atoms, whereas the reactivity of glycine is only slightly affected upon anchoring.

Details

Language :
English
ISSN :
0169-6149
Volume :
36
Issue :
4
Database :
MEDLINE
Journal :
Origins of life and evolution of the biosphere : the journal of the International Society for the Study of the Origin of Life
Publication Type :
Academic Journal
Accession number :
16572295
Full Text :
https://doi.org/10.1007/s11084-006-9010-0