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High-resolution aliphatic side-chain assignments in 3D HCcoNH experiments with joint H-C evolution and non-uniform sampling.

Authors :
Sun ZY
Hyberts SG
Rovnyak D
Park S
Stern AS
Hoch JC
Wagner G
Source :
Journal of biomolecular NMR [J Biomol NMR] 2005 May; Vol. 32 (1), pp. 55-60.
Publication Year :
2005

Abstract

We describe an efficient NMR triple resonance approach that correlates, at high resolution, protein side-chain and backbone resonances. It relies on the combination of two strategies: joint evolution of aliphatic side-chain proton/carbon coherences using a backbone N-H based HCcoNH reduced dimensionality (RD) experiment and non-uniform sampling (NUS) in two indirect dimensions. A typical data set containing such correlation information can be acquired in 2 days, at very high resolution unfeasible for conventional 4D HCcoNH-TOCSY experiments. The resonances of the aliphatic side-chain protons are unambiguously assigned to their attached carbons through the analysis of the 'sum' and 'difference' spectra. This approach circumvents the tedious process of manual resonance assignments using HCcH-TOCSY data, while providing additional resolving power of backbone N-H signals. A simple peak-list based algorithm has been implemented in the IBIS software for rapid automated backbone and side-chain assignments.

Details

Language :
English
ISSN :
0925-2738
Volume :
32
Issue :
1
Database :
MEDLINE
Journal :
Journal of biomolecular NMR
Publication Type :
Academic Journal
Accession number :
16041483
Full Text :
https://doi.org/10.1007/s10858-005-3339-y