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Arg343 in human surfactant protein D governs discrimination between glucose and N-acetylglucosamine ligands.
- Source :
-
Glycobiology [Glycobiology] 2004 Aug; Vol. 14 (8), pp. 693-700. Date of Electronic Publication: 2004 Apr 28. - Publication Year :
- 2004
-
Abstract
- Surfactant protein D (SP-D), one of the members of the collectin family of C-type lectins, is an important component of pulmonary innate immunity. SP-D binds carbohydrates in a calcium-dependent manner, but the mechanisms governing its ligand recognition specificity are not well understood. SP-D binds glucose (Glc) stronger than N-acetylglucosamine (GlcNAc). Structural superimposition of hSP-D with mannose- binding protein C (MBP-C) complexed with GlcNAc reveals steric clashes between the ligand and the side chain of Arg343 in hSP-D. To test whether Arg343 contributes to Glc > GlcNAc recognition specificity, we constructed a computational model of Arg343-->Val (R343V) mutant hSP-D based on homology with MBP-C. Automated docking of alpha-Me-Glc and alpha-Me-GlcNAc into wild-type hSP-D and the R343V mutant of hSP-D suggests that Arg343 is critical in determining ligand-binding specificity by sterically prohibiting one binding orientation. To empirically test the docking predictions, an R343V mutant recombinant hSP-D was constructed. Inhibition analysis shows that the R343V mutant binds both Glc and GlcNAc with higher affinity than the wild-type protein and that the R343V mutant binds Glc and GlcNAc equally well. These data demonstrate that Arg343 is critical for hSP-D recognition specificity and plays a key role in defining ligand specificity differences between MBP and SP-D. Additionally, our results suggest that the number of binding orientations contributes to monosaccharide binding affinity.
- Subjects :
- Amino Acid Substitution
Arginine genetics
Binding Sites
Humans
Ligands
Models, Molecular
Mutagenesis, Site-Directed
Mutation
Protein Binding
Protein Conformation
Pulmonary Surfactant-Associated Protein D genetics
Acetylglucosamine chemistry
Arginine chemistry
Computer Simulation
Glucose chemistry
Pulmonary Surfactant-Associated Protein D chemistry
Subjects
Details
- Language :
- English
- ISSN :
- 0959-6658
- Volume :
- 14
- Issue :
- 8
- Database :
- MEDLINE
- Journal :
- Glycobiology
- Publication Type :
- Academic Journal
- Accession number :
- 15115749
- Full Text :
- https://doi.org/10.1093/glycob/cwh088