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Fundibacter jadensis gen. nov., sp. nov., a new slightly halophilic bacterium, isolated from intertidal sediment.
- Source :
-
International journal of systematic bacteriology [Int J Syst Bacteriol] 1999 Apr; Vol. 49 Pt 2, pp. 441-8. - Publication Year :
- 1999
-
Abstract
- A moderately halophilic hydrocarbon-degrading bacterium was isolated from continuous cultures containing a suspension of intertidal sediment from the German North Sea coast with hexadecane as the sole carbon source. On the basis of phenotypic characteristics, fatty acid analysis and 16S rDNA sequence analysis, it was considered to be a new species belonging to a new genus. It is a Gram-negative, aerobic, rod-shaped bacterium, whose cell size varies. It grows at concentrations of 0.5-15% (w/v) NaCl and utilizes a restricted spectrum of carbon sources. The G + C content of the DNA is 63.6 mol%. Comparative 16S rDNA studies show a clear affiliation of this bacterium to the gamma subclass of the class Proteobacteria. Comparison of phylogenetic data indicate that it is most closely related to Marinobacter hydrocarbonoclasticus (88.9% similarity in 16S rRNA gene sequence). Since it is impossible to find a sufficiently closely related species, we propose the name Fundibacter jadensis gen. nov., sp. nov. for the bacteria. The type strain is T9T (= DSM 12178T).
- Subjects :
- Alkanes metabolism
Base Composition
Biodegradation, Environmental
DNA, Bacterial chemistry
DNA, Bacterial genetics
DNA, Ribosomal chemistry
DNA, Ribosomal genetics
Fatty Acids analysis
Gram-Negative Aerobic Bacteria chemistry
Gram-Negative Aerobic Bacteria isolation & purification
Gram-Negative Aerobic Bacteria physiology
Molecular Sequence Data
North Sea
Phylogeny
RNA, Ribosomal, 16S genetics
Sodium Chloride metabolism
Geologic Sediments microbiology
Gram-Negative Aerobic Bacteria classification
Water Microbiology
Subjects
Details
- Language :
- English
- ISSN :
- 0020-7713
- Volume :
- 49 Pt 2
- Database :
- MEDLINE
- Journal :
- International journal of systematic bacteriology
- Publication Type :
- Academic Journal
- Accession number :
- 10319463
- Full Text :
- https://doi.org/10.1099/00207713-49-2-441