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Efficient prediction of protein conformational pathways based on the hybrid elastic network model.

Authors :
Seo, Sangjae
Jang, Yunho
Qian, Pengfei
Liu, Wing Kam
Choi, Jae-Boong
Lim, Byeong Soo
Kim, Moon Ki
Source :
Journal of Molecular Graphics & Modelling. Feb2014, Vol. 47, p25-36. 12p.
Publication Year :
2014

Abstract

Highlights: [•] We developed hybrid elastic network (HENM) model based on rigid cluster model. [•] HENM has been applied to both normal mode analysis and pathway generation. [•] The simulation results of selected proteins and ribosome show the robustness and reliability of the model. [•] HENM is expected to improve the computational efficiency of elastic network model. [Copyright &y& Elsevier]

Details

Language :
English
ISSN :
10933263
Volume :
47
Database :
Academic Search Index
Journal :
Journal of Molecular Graphics & Modelling
Publication Type :
Academic Journal
Accession number :
93419646
Full Text :
https://doi.org/10.1016/j.jmgm.2013.10.009