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Bluues server: electrostatic properties of wild-type and mutated protein structures.

Authors :
Walsh, Ian
Minervini, Giovanni
Corazza, Alessandra
Esposito, Gennaro
Tosatto, Silvio C. E.
Fogolari, Federico
Source :
Bioinformatics. Aug2012, Vol. 28 Issue 16, p2189-2190. 2p.
Publication Year :
2012

Abstract

Motivation: Electrostatic calculations are an important tool for deciphering many functional mechanisms in proteins. Generalized Born (GB) models offer a fast and convenient computational approximation over other implicit solvent-based electrostatic models. Here we present a novel GB-based web server, using the program Bluues, to calculate numerous electrostatic features including pKa-values and surface potentials. The output is organized allowing both experts and beginners to rapidly sift the data. A novel feature of the Bluues server is that it explicitly allows to find electrostatic differences between wild-type and mutant structures.Availability: The Bluues server, examples and extensive help files are available for non-commercial use at URL: http://protein.bio.unipd.it/bluues/.Contact: silvio.tosatto@unipd.it [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
13674803
Volume :
28
Issue :
16
Database :
Academic Search Index
Journal :
Bioinformatics
Publication Type :
Academic Journal
Accession number :
78359944
Full Text :
https://doi.org/10.1093/bioinformatics/bts343