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Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications.

Authors :
Yilmaz, Pelin
Kottmann, Renzo
Field, Dawn
Knight, Rob
Cole, James R.
Amaral-Zettler, Linda
Gilbert, Jack A.
Karsch-Mizrachi, Ilene
Johnston, Anjanette
Cochrane, Guy
Vaughan, Robert
Hunter, Christopher
Park, Joonhong
Morrison, Norman
Rocca-Serra, Philippe
Sterk, Peter
Arumugam, Manimozhiyan
Bailey, Mark
Baumgartner, Laura
Birren, Bruce W.
Source :
Nature Biotechnology. May2011, Vol. 29 Issue 5, p415-420. 6p. 1 Diagram, 1 Chart.
Publication Year :
2011

Abstract

Here we present a standard developed by the Genomic Standards Consortium (GSC) for reporting marker gene sequences-the minimum information about a marker gene sequence (MIMARKS). We also introduce a system for describing the environment from which a biological sample originates. The 'environmental packages' apply to any genome sequence of known origin and can be used in combination with MIMARKS and other GSC checklists. Finally, to establish a unified standard for describing sequence data and to provide a single point of entry for the scientific community to access and learn about GSC checklists, we present the minimum information about any (x) sequence (MIxS). Adoption of MIxS will enhance our ability to analyze natural genetic diversity documented by massive DNA sequencing efforts from myriad ecosystems in our ever-changing biosphere. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
10870156
Volume :
29
Issue :
5
Database :
Academic Search Index
Journal :
Nature Biotechnology
Publication Type :
Academic Journal
Accession number :
60459084
Full Text :
https://doi.org/10.1038/nbt.1823