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A simple mass-action model for the eukaryotic heat shock response and its mathematical validation.

Authors :
Petre, Ion
Mizera, Andrzej
Hyder, Claire L.
Meinander, Annika
Mikhailov, Andrey
Morimoto, Richard I.
Sistonen, Lea
Eriksson, John E.
Back, Ralph-Johan
Source :
Natural Computing. Mar2011, Vol. 10 Issue 1, p595-612. 18p.
Publication Year :
2011

Abstract

The heat shock response is a primordial defense mechanism against cell stress and protein misfolding. It proceeds with the minimum number of mechanisms that any regulatory network must include, a stress-induced activation and a feedback regulation, and can thus be regarded as the archetype for a cellular regulatory process. We propose here a simple mechanistic model for the eukaryotic heat shock response, including its mathematical validation. Based on numerical predictions of the model and on its sensitivity analysis, we minimize the model by identifying the reactions with marginal contribution to the heat shock response. As the heat shock response is a very basic and conserved regulatory network, our analysis of the network provides a useful foundation for modeling strategies of more complex cellular processes. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
15677818
Volume :
10
Issue :
1
Database :
Academic Search Index
Journal :
Natural Computing
Publication Type :
Academic Journal
Accession number :
59222561
Full Text :
https://doi.org/10.1007/s11047-010-9216-y