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A massively-parallel electronic-structure calculations based on real-space density functional theory

Authors :
Iwata, Jun-Ichi
Takahashi, Daisuke
Oshiyama, Atsushi
Boku, Taisuke
Shiraishi, Kenji
Okada, Susumu
Yabana, Kazuhiro
Source :
Journal of Computational Physics. Mar2010, Vol. 229 Issue 6, p2339-2363. 25p.
Publication Year :
2010

Abstract

Abstract: Based on the real-space finite-difference method, we have developed a first-principles density functional program that efficiently performs large-scale calculations on massively-parallel computers. In addition to efficient parallel implementation, we also implemented several computational improvements, substantially reducing the computational costs of operations such as the Gram–Schmidt procedure and subspace diagonalization. Using the program on a massively-parallel computer cluster with a theoretical peak performance of several TFLOPS, we perform electronic-structure calculations for a system consisting of over 10,000 Si atoms, and obtain a self-consistent electronic-structure in a few hundred hours. We analyze in detail the costs of the program in terms of computation and of inter-node communications to clarify the efficiency, the applicability, and the possibility for further improvements. [Copyright &y& Elsevier]

Details

Language :
English
ISSN :
00219991
Volume :
229
Issue :
6
Database :
Academic Search Index
Journal :
Journal of Computational Physics
Publication Type :
Academic Journal
Accession number :
47634695
Full Text :
https://doi.org/10.1016/j.jcp.2009.11.038