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NMR Coupling Constants, Karplus Equations, and Adjusted MD Statistics: Detecting Diagnostic Torsion Angles for the Solution Geometry of 6‐[α‐d‐Mannopyranosyl]‐d‐Mannopyranose (Mannobiose).

Authors :
Franz, Andreas H.
Bromley, Kendall S.
Aung, Ei T.
Do, Stephen Q. L.
Rosenblatt, Hana M.
Watson, Amelia J.
Source :
Magnetic Resonance in Chemistry. Jan2025, Vol. 63 Issue 1, p3-16. 14p.
Publication Year :
2025

Abstract

The quantitative solution conformations of 2‐(hydroxymethyl)‐tetrahydropyran, α‐methyl‐d‐mannopyranoside, and 6‐[α‐d‐mannopyranosyl]‐d‐mannopyranose (mannobiose) are described. Parametrized Karplus equations for redundant spin pairs across the terminal ω‐torsion and the glycosidic ω‐torsion for mannobiose are developed, including ω/θ‐hypersurfaces for the terminal hydroxymethylene group. Experimental NMR data, algorithmic spectral simulation (clustered Hamiltonian method), molecular dynamics (MD) simulations (GLYCAM06), energy minimizations by DFT, and adjusted torsion angle populations weighted over the Karplus‐type equations are used. We demonstrate that spectral simulation is a powerful tool in the refinement of initial J values obtained from static GAIO DFT calculations. We also show that only as few as one of multiple redundant torsions can be diagnostic for conformational analysis of the disaccharide. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
07491581
Volume :
63
Issue :
1
Database :
Academic Search Index
Journal :
Magnetic Resonance in Chemistry
Publication Type :
Academic Journal
Accession number :
181226368
Full Text :
https://doi.org/10.1002/mrc.5483