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Development of a Diagnostic Model for Pancreatic Ductal Adenocarcinoma Using Machine Learning and Blood-Based miRNAs.

Authors :
Tang, Jason Y.
Kouznetsova, Valentina L.
Kesari, Santosh
Tsigelny, Igor F.
Source :
Oncology. Sep2024, p1-10. 10p. 3 Illustrations.
Publication Year :
2024

Abstract

<bold><italic>Introduction:</italic></bold> Pancreatic ductal adenocarcinoma (PDAC) has the lowest survival rate among all major cancers due to a lack of symptoms in early stages, early detection tools, and optimal therapies for late-stage patients. Thus, effective and non-invasive diagnostic tests are greatly needed. Recently, circulating miRNAs have been reported to be altered in PDAC. They are promising biomarkers because of stability in the blood, ease of non-invasive detection, and convenient screening methods. This study aimed to use blood-based miRNA biomarkers and various analysis methods in the development of a machine-learning (ML) model for PDAC. <bold><italic>Methods:</italic></bold> Blood-based miRNAs associated with PDAC were collected from open sources. miRNA sequences, targeted genes, and involved pathways were used to construct a set of descriptors for an ML model. <bold><italic>Results:</italic></bold> Bioinformatics analysis revealed that most genes in pancreatic cancer and insulin signaling pathways were targeted by the PDAC-related miRNAs. The best-performing ML model with the Random Forest classifier was able to achieve an accuracy of 88.4%. Model evaluations of an independent PDAC-associated miRNAs test set had 100% accuracy while non-cancer miRNAs had 52.4% accuracy, indicating specificity to PDAC. <bold><italic>Conclusions:</italic></bold> Our results suggest an ML model developed using blood-based miRNA biomarkers’ target gene, pathway, and sequence features could be potentially implicated in PDAC diagnostics. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
00302414
Database :
Academic Search Index
Journal :
Oncology
Publication Type :
Academic Journal
Accession number :
180166182
Full Text :
https://doi.org/10.1159/000540329