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Advancing epigenetic profiling in cervical cancer: machine learning techniques for classifying DNA methylation patterns.

Authors :
Apoorva
Handa, Vikas
Batra, Shalini
Arora, Vinay
Source :
3 Biotech. 10/9/2024, Vol. 14 Issue 11, p1-39. 39p.
Publication Year :
2024

Abstract

This study investigates the ability to predict DNA methylation patterns in cervical cancer cells using decision-tree-based ensemble approaches and neural network-based models. The research findings suggest that a model based on random forest achieves a significant prediction accuracy of 91.35%. This projection was derived from comprehensive experimentation and a meticulous performance evaluation of the random forest model, employing a range of measures including Accuracy, Sensitivity, Specificity, Matthews Correlation Coefficient, F1-score, Recall, and Precision. The results indicate that the random forest model exhibits superior performance compared to other tree-based models such as the Simple Decision Tree and XGBoost, as well as neural network-based models including Convolutional Neural Networks, Feed Forward Networks, and Wavelet Neural Networks. The findings indicate that using random forest-based techniques has great potential for future study and might be highly valuable in clinical applications, especially in improving diagnostic and treatment strategies based on epigenetic profiles. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
2190572X
Volume :
14
Issue :
11
Database :
Academic Search Index
Journal :
3 Biotech
Publication Type :
Academic Journal
Accession number :
180153760
Full Text :
https://doi.org/10.1007/s13205-024-04107-2