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Computation of X-ray and Neutron Scattering Patterns to Benchmark Atomistic Simulations against Experiments.

Authors :
Majumdar, Arnab
Müller, Martin
Busch, Sebastian
Source :
International Journal of Molecular Sciences. Feb2024, Vol. 25 Issue 3, p1547. 27p.
Publication Year :
2024

Abstract

Molecular Dynamics simulations study material structure and dynamics at the atomic level. X-ray and neutron scattering experiments probe exactly the same time- and length scales as the simulations. In order to benchmark simulations against measured scattering data, a program is required that computes scattering patterns from simulations with good single-core performance and support for parallelization. In this work, the existing program Sassena is used as a potent solution to this requirement for a range of scattering methods, covering pico- to nanosecond dynamics, as well as the structure from some Ångströms to hundreds of nanometers. In the case of nanometer-level structures, the finite size of the simulation box, which is referred to as the finite size effect, has to be factored into the computations for which a method is described and implemented into Sassena. Additionally, the single-core and parallelization performance of Sassena is investigated, and several improvements are introduced. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
16616596
Volume :
25
Issue :
3
Database :
Academic Search Index
Journal :
International Journal of Molecular Sciences
Publication Type :
Academic Journal
Accession number :
175372891
Full Text :
https://doi.org/10.3390/ijms25031547