Back to Search Start Over

Fractal feature selection model for enhancing high-dimensional biological problems.

Authors :
Alsaeedi, Ali Hakem
Al-Mahmood, Haider Hameed R.
Alnaseri, Zainab Fahad
Aziz, Mohammad R.
Al-Shammary, Dhiah
Ibaida, Ayman
Ahmed, Khandakar
Source :
BMC Bioinformatics. 1/9/2024, Vol. 25 Issue 1, p1-23. 23p.
Publication Year :
2024

Abstract

The integration of biology, computer science, and statistics has given rise to the interdisciplinary field of bioinformatics, which aims to decode biological intricacies. It produces extensive and diverse features, presenting an enormous challenge in classifying bioinformatic problems. Therefore, an intelligent bioinformatics classification system must select the most relevant features to enhance machine learning performance. This paper proposes a feature selection model based on the fractal concept to improve the performance of intelligent systems in classifying high-dimensional biological problems. The proposed fractal feature selection (FFS) model divides features into blocks, measures the similarity between blocks using root mean square error (RMSE), and determines the importance of features based on low RMSE. The proposed FFS is tested and evaluated over ten high-dimensional bioinformatics datasets. The experiment results showed that the model significantly improved machine learning accuracy. The average accuracy rate was 79% with full features in machine learning algorithms, while FFS delivered promising results with an accuracy rate of 94%. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
14712105
Volume :
25
Issue :
1
Database :
Academic Search Index
Journal :
BMC Bioinformatics
Publication Type :
Academic Journal
Accession number :
174684415
Full Text :
https://doi.org/10.1186/s12859-023-05619-z