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Current Fungal Taxonomy and Developments in the Identification System.

Authors :
Lin, Pei
Kook, MooChang
Yi, Tae-Hoo
Yan, Zheng-Fei
Source :
Current Microbiology. Dec2023, Vol. 80 Issue 12, p1-14. 14p.
Publication Year :
2023

Abstract

A functional identification system is the core and basis of fungal taxonomy, which provides sufficient diagnostic characteristics for species delimitation. Phenotype-based identification systems have exhibited significant drawbacks, such as being laborious and time-consuming. Thus, a molecular-based identification system (rDNA, DNA fingerprint, etc.) is proposed for application to fungi that lack reliable morphological characteristics. High Throughput Sequencing also makes great contributions to fungal taxonomy. However, the formal naming of nonculturable fungi from environmental sequencing is a significant challenge. Biochemical profile-based identification systems have outstanding value in fungal taxonomy and can occasionally be indispensable. This method utilizes biomarker metabolites and proteins that are expected to be unequivocal and stable. Of these, Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry has become the method of choice for chemotaxonomy. In sum, these described identification systems cannot solve all problems of species delimitation, and considerable attention to the updating of fungal nomenclature, standardization of techniques, knowledge sharing, and dissemination will be necessary. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
03438651
Volume :
80
Issue :
12
Database :
Academic Search Index
Journal :
Current Microbiology
Publication Type :
Academic Journal
Accession number :
173041151
Full Text :
https://doi.org/10.1007/s00284-023-03514-7