The transcriptome of Populus in elevated CO2.

• The consequences of increasing atmospheric carbon dioxide for long-term adaptation of forest ecosystems remain uncertain, with virtually no studies undertaken at the genetic level. A global analysis using cDNA microarrays was conducted following 6 yr exposure ofPopulus ×  euramericana(clone I-214) to elevated[CO2] in a FACE (free-air CO2 enrichment) experiment.• Gene expression was sensitive to elevated[CO2] but the response depended on the developmental age of the leaves, and< 50 transcripts differed significantly between different CO2 environments. For young leaves most differentially expressed genes were upregulated in elevated[CO2], while in semimature leaves most were downregulated in elevated[CO2].• For transcripts related only to the small subunit of Rubisco, upregulation in LPI 3 and downregulation in LPI 6 leaves in elevated CO2 was confirmed byanova. Similar patterns of gene expression for young leaves were also confirmed independently across year 3 and year 6 microarray data, and using real-time RT–PCR.• This study provides the first clues to the long-term genetic expression changes that may occur during long-term plant response to elevated CO2.New Phytologist(2005)doi: 10.1111/j.1469-8137.2005.01450.x© New Phytologist(2005) [ABSTRACT FROM AUTHOR]