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A general and efficient approach to synthesize the phosphoramidites of 5′-18O labeled purine nucleosides.

Authors :
Li, Nan-Sheng
Dai, Qing
Weissman, Benjamin
Harris, Michael E.
Piccirilli, Joseph A.
Source :
Nucleosides, Nucleotides & Nucleic Acids. 2023, Vol. 42 Issue 11, p930-943. 14p.
Publication Year :
2023

Abstract

5′-18O labeled RNA oligos are important probes to investigate the mechanism of 2′-O-transphosphorylation reactions. Here we describe a general and efficient synthetic approach to the phosphoramidite derivatives of 5′-18O labeled nucleosides starting from the corresponding commercially available 5′-O-DMT protected nucleosides. Using this method, we prepared 5′-18O-guanosine phosphoramidite in 8 steps (13.2% overall yield), 5′-18O-adenosine phosphoramidite in 9 steps (10.1% overall yield) and 5′-18O-2′-deoxyguanosine phosphoramidite in 6 steps (12.8% overall yield). These 5′-18O labeled phosphoramidites can be incorporated into RNA oligos by solid phase synthesis for determination of heavy atom isotope effects in RNA 2′-O-transphosphorylation reactions. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
15257770
Volume :
42
Issue :
11
Database :
Academic Search Index
Journal :
Nucleosides, Nucleotides & Nucleic Acids
Publication Type :
Academic Journal
Accession number :
171385093
Full Text :
https://doi.org/10.1080/15257770.2023.2218421