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Polygalic acid inhibits african swine fever virus polymerase activity: findings from machine learning and in vitro testing.

Authors :
Choi, Jiwon
Lee, Hyundo
Cho, Soyoung
Choi, Yorim
Pham, Thuy X.
Huynh, Trang T. X.
Lim, Yun-Sook
Hwang, Soon B.
Source :
Journal of Computer-Aided Molecular Design. Sep2023, Vol. 37 Issue 9, p453-461. 9p.
Publication Year :
2023

Abstract

African swine fever virus (ASFV), an extremely contagious virus with high mortality rates, causes severe hemorrhagic viral disease in both domestic and wild pigs. Fortunately, ASFV cannot be transmitted from pigs to humans. However, ongoing ASFV outbreaks could have severe economic consequences for global food security. Although ASFV was discovered several years ago, no vaccines or treatments are commercially available yet; therefore, the identification of new anti-ASFV drugs is urgently warranted. Using molecular docking and machine learning, we have previously identified pentagastrin, cangrelor, and fostamatinib as potential antiviral drugs against ASFV. Here, using machine learning combined with docking simulations, we identified natural products with a high affinity for AsfvPolX proteins. We selected five natural products (NPs) that are located close in chemical space to the six known natural flavonoids that possess anti-ASFV activity. Polygalic acid markedly reduced AsfvPolX polymerase activity in a dose-dependent manner. We propose an efficient protocol for identifying NPs as potential antiviral drugs by identifying chemical spaces containing high-affinity binders against ASFV in NP databases. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
0920654X
Volume :
37
Issue :
9
Database :
Academic Search Index
Journal :
Journal of Computer-Aided Molecular Design
Publication Type :
Academic Journal
Accession number :
165467587
Full Text :
https://doi.org/10.1007/s10822-023-00520-6