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Construction of circRNA-associated ceRNA network reveals the regulation of fibroblast proliferation in cervical cancer.

Authors :
Sun, Wei
Hang, Dong
Han, Suping
Fu, Shilong
Ma, Hongxia
Dong, Xuesi
Xu, Yongjie
Li, Ni
Hu, Zhibin
Source :
Gene. Nov2022, Vol. 844, pN.PAG-N.PAG. 1p.
Publication Year :
2022

Abstract

• 9 pairs of cervical cancer and paracancerous tissues were used. • We identified a new circZNF208 related ceRNA network through bioinformatic analysis. • circZNF208 can promote fibroblast proliferation. • circZNF208 interfering with hsa-miR-324-3p regulate downstream gene LPHN3. • Our results might be valuable for diagnosis and treatment of cervical cancer. Cervical cancer is one of the major cancers that threaten the health of women. CircRNA is an important factor in the regulation of cancer development and progression. The role of circRNA in cervical cancer is less well studied. The aim of this study was to explore the mechanism of circRNA effects on cervical cancer using circRNA-seq technology to study the expression profile data of 9 pairs of primary cervical cancer and paracancerous tissues. DESeq2 was used to analyse differentially expressed circRNA and mRNA in cervical cancer and paracancerous tissues. MiRanda and TargetScan are used to predict miRNAs that interact with circRNAs and mRNAs and to construct circRNA-miRNA-mRNA regulatory networks. KEGG and GO are used for functional annotation of differentially expressed genes. TIDE, TIMER2.0 was used to assess the status of the tumour immune microenvironment in cervical cancer. GEPIA2 was used to validate the results of differential expression analysis. We eventually obtained 22 differentially expressed circRNAs (7 up-regulated and 15 down-regulated) and 1834 differentially expressed genes (613 up-regulated and 1221 down-regulated). The results of the KEGG analysis showed that the differentially expressed genes were mainly enriched in cell cycle and cancer-related signalling pathways. The new circRNA: circZNF208 was identified to promote fibroblast proliferation by interfering with its downstream hsa-miR-324-3p regulating four downstream genes LPHN3. The level of fibroblast infiltration is implicated in the poor prognosis of cervical cancer. We have identified a novel circRNA: circZNF208 that can interfere with fibroblast proliferation in cervical cancer through a ceRNA regulatory network, thereby promoting fibroblast proliferation in cervical cancer and affecting the prognosis of cancer patients. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
03781119
Volume :
844
Database :
Academic Search Index
Journal :
Gene
Publication Type :
Academic Journal
Accession number :
158930407
Full Text :
https://doi.org/10.1016/j.gene.2022.146824