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Novel epigenetic age estimation in wild-caught Gulf of Mexico reef fishes.

Authors :
Weber, D. Nick
Fields, Andrew T.
Patterson III, William F.
Barnett, Beverly K.
Hollenbeck, Christopher M.
Portnoy, David S.
Source :
Canadian Journal of Fisheries & Aquatic Sciences. 2022, Vol. 79 Issue 1, p1-5. 5p. 1 Graph.
Publication Year :
2022

Abstract

Cutting-edge DNA methylation-based epigenetic aging techniques were applied to Gulf of Mexico northern red snapper (Lutjanus campechanus; n = 10; 1–26 years old) and red grouper (Epinephelus morio; n = 10; 2–14 years old). Bisulfite-converted restriction site-associated DNA sequencing was used to identify CpG sites (cytosines followed by guanines) that exhibit age-correlated DNA methylation, and species-specific epigenetic clocks developed from hundreds of CpG sites in each species showed strong agreement between predicted and otolith-derived age (r2 > 0.99 for both species). Results suggest epigenetic age estimation could provide an accurate and efficient approach to mass-aging fishes in a non-invasive manner. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
0706652X
Volume :
79
Issue :
1
Database :
Academic Search Index
Journal :
Canadian Journal of Fisheries & Aquatic Sciences
Publication Type :
Academic Journal
Accession number :
154482567
Full Text :
https://doi.org/10.1139/cjfas-2021-0240