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The Active Site of a Prototypical "Rigid" Drug Target is Marked by Extensive Conformational Dynamics.

Authors :
Singh, Himanshu
Das, Chandan K.
Vasa, Suresh K.
Grohe, Kristof
Schäfer, Lars V.
Linser, Rasmus
Source :
Angewandte Chemie International Edition. 12/14/2020, Vol. 59 Issue 51, p22916-22921. 6p.
Publication Year :
2020

Abstract

Drug discovery, in particular optimization of candidates using medicinal chemistry, is generally guided by structural biology. However, for optimizing binding kinetics, relevant for efficacy and off‐target effects, information on protein motion is important. Herein, we demonstrate for the prototypical textbook example of an allegedly "rigid protein" that substantial active‐site dynamics have generally remained unrecognized, despite thousands of medicinal‐chemistry studies on this model over decades. Comparing cryogenic X‐ray structures, solid‐state NMR on micro‐crystalline protein at room temperature, and solution NMR structure and dynamics, supported by MD simulations, we show that under physiologically relevant conditions the pocket is in fact shaped by pronounced open/close conformational‐exchange dynamics. The study, which is of general significance for pharmacological research, evinces a generic pitfall in drug discovery routines. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
14337851
Volume :
59
Issue :
51
Database :
Academic Search Index
Journal :
Angewandte Chemie International Edition
Publication Type :
Academic Journal
Accession number :
147476569
Full Text :
https://doi.org/10.1002/anie.202009348