Temporal Dynamics of the Pulmonary Microbiome after Lung Transplantation.

The pulmonary microbiome after lung transplantation has recently come into the focus of research. Especially, host-microbiome interactions are thought to be an important factor in graft-related immunological processes. In lung transplantation, temporal changes of the pulmonary microbiome have not yet been elucidated. In a total cohort of 80 patients receiving standard double lung transplantation, 50 bronchioalveolar lavage (BAL) samples from donors were collected prior to cold ischemia. After transplantation, 128 BAL samples were collected at various time points of routine follow-up bronchoscopies between 0 and 400 days post-transplant. Bacterial 16S rRNA gene sequencing was conducted to analyze the composition of the pulmonary microbiome in these samples. The lung microbiome showed significant temporal dynamics after lung transplantation. Recipient-donor similarity between matched samples decreased after the first week post transplantation. Underlying transplant indications were significantly associated with microbial profiles even after transplantation. Shannon diversity and Chao1 richness at the species level showed an increasing diversity of the microbiome over time. Our data provides new insights into the dynamics of microbial profiles after transplantation. We observed that recipient-associated factors, rather than the donor microbiome, shape the lung microbiome after transplantation. [ABSTRACT FROM AUTHOR]