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VeriNA3d: an R package for nucleic acids data mining.
- Source :
-
Bioinformatics . 12/15/2019, Vol. 35 Issue 24, p5334-5336. 3p. - Publication Year :
- 2019
-
Abstract
- Summary veriNA3d is an R package for the analysis of nucleic acids structural data, with an emphasis in complex RNA structures. In addition to single-structure analyses, veriNA3d also implements functions to handle whole datasets of mmCIF/PDB structures that could be retrieved from public/local repositories. Our package aims to fill a gap in the data mining of nucleic acids structures to produce flexible and high throughput analysis of structural databases. Availability and implementation http://mmb.irbbarcelona.org/gitlab/dgallego/veriNA3d. Supplementary information Supplementary data are available at Bioinformatics online. [ABSTRACT FROM AUTHOR]
- Subjects :
- *NUCLEIC acids
*DATA mining
*FLEXIBLE structures
*ACID analysis
*PACKAGING
Subjects
Details
- Language :
- English
- ISSN :
- 13674803
- Volume :
- 35
- Issue :
- 24
- Database :
- Academic Search Index
- Journal :
- Bioinformatics
- Publication Type :
- Academic Journal
- Accession number :
- 141171766
- Full Text :
- https://doi.org/10.1093/bioinformatics/btz553