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FisOmics: A portal of fish genomic resources.

Authors :
Pathak, Ajey Kumar
Rashid, Iliyas
Nagpure, Naresh Sahebrao
Kumar, Ravindra
Pati, Rameshwar
Singh, Mahender
Murali, S.
Kushwaha, Basdeo
Kumar, Dinesh
Rai, Anil
Source :
Genomics. Dec2019, Vol. 111 Issue 6, p1923-1928. 6p.
Publication Year :
2019

Abstract

An online portal, accessible at URL: http://mail.nbfgr.res.in/FisOmics /, was developed that features different genomic databases and tools. The portal, named as FisOmics, acts as a platform for sharing fish genomic sequences and related information in addition to facilitating the access of high-performance computational resources for genome and proteome data analyses. It provides the ability for quarrying, analysing and visualizing genomic sequences and related information. The featured databases in FisOmics are in the World Wide Web domain already. The aim to develop portal was to provide a nodal point to access the featured databases and work conveniently. Presently, FisOmics includes databases on barcode sequences, microsatellite markers, mitogenome sequences, hypoxia-responsive genes and karyology of fishes. Besides, it has a link to other molecular resources and reports on the on-going activities and research achievements. • FisOmics is a workbench of multi-objective vision in fish genomics. • System administrator manages workbench modules and all information about authenticated users to utilize workbench. • An integration of different fish genomic resources for exploring the information. • Implemented tools facilitate different kinds of analyses of DNA sequences. • Well-suited local search with embedded results by querying on different databases. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
08887543
Volume :
111
Issue :
6
Database :
Academic Search Index
Journal :
Genomics
Publication Type :
Academic Journal
Accession number :
139631050
Full Text :
https://doi.org/10.1016/j.ygeno.2019.01.003