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Introducing Fiji and ICY image processing techniques in ichnological research as a tool for sedimentary basin analysis.

Authors :
Miguez-Salas, Olmo
Dorador, Javier
Rodríguez-Tovar, Francisco J.
Source :
Marine Geology. Jul2019, Vol. 413, p1-9. 9p.
Publication Year :
2019

Abstract

In recent years, image treatment has been appraised as a very powerful tool to facilitate ichnological analysis, especially in marine cores of modern sediments, supporting the determination of certain ichnological features. However, it is still a new approach and detailed research is necessary to encounter a faster and more efficient method. The present study focuses on two image processing techniques, Fiji and ICY, and their comparison with a refined version of the well-established high-resolution image treatment. Strengths and weaknesses of the methodologies for the determination of three main features were explored: i) visibility of trace fossils; ii) quantification of the percentage of bioturbated surface, and iii) penetration depth estimation. Refined high-resolution image treatment gives the best results for enhanced visibility of trace fossils, whereas Fiji is found to be a sound and rapid option. One disadvantage shared by Fiji and ICY is the binary character of the produced images, which may impede later ichnotaxonomical differentiation. Both Fiji and ICY (+ Fiji) are rapid alternatives for quantifying the bulk amount of bioturbated surface. The Magic Wand Method (+ RefineEdge), based on high-resolution image treatment, provides good results regardless of the contrast of the images, and it additionally allows for a more detailed quantification. The semi-automatic character of ICY favors quick estimation of penetration depth and facilitates differentiation between distinct tracemaker communities, based on a rapid quantification of pixel values. Thus, Fiji and ICY methods offer good results and are much less time-consuming than high-resolution image treatment. They are proposed as faster alternatives for the estimation of ichnological features, especially useful at the beginning stages of research, when a large number of samples must be analyzed. • Image treatment methods have been proved in ichnological research • High-resolution image treatment RefineEdge is the best to increase visibility • Fiji (CLAHE) is a rapid alternative for preliminary analysis of cores • Fiji and ICY (+ Fiji) is a rapid alternatives to quantify bioturbated surface • Intensity Profile plugin by ICY are useful for estimating penetration depth. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
00253227
Volume :
413
Database :
Academic Search Index
Journal :
Marine Geology
Publication Type :
Academic Journal
Accession number :
137110711
Full Text :
https://doi.org/10.1016/j.margeo.2019.03.013