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Can a breakpoint graph be decomposed into none other than 2-cycles?

Authors :
Pu, Lianrong
Lin, Yu
Zhu, Daming
Jiang, Haitao
Source :
Theoretical Computer Science. Jul2018, Vol. 734, p38-45. 8p.
Publication Year :
2018

Abstract

Breakpoint graph has been widely used as a key data structure in algorithm design for genome rearrangements. The problem of breakpoint graph cycle decomposition, which asks for a largest collection of edge-disjoint cycles, is crucial in computing rearrangement distances between genomes. This problem is NP-hard, and can be approximated to 1.4193 + ϵ . It is still open for deciding whether a breakpoint graph can admit a cycle decomposition with none other than 2-cycles. In this paper, we present a linear time algorithm to detect whether a breakpoint graph can be decomposed into none other than 2-cycles. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
03043975
Volume :
734
Database :
Academic Search Index
Journal :
Theoretical Computer Science
Publication Type :
Academic Journal
Accession number :
129922692
Full Text :
https://doi.org/10.1016/j.tcs.2017.09.019