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shinyCircos: an R/Shiny application for interactive creation of Circos plot.

Authors :
Yu, Yiming
Ouyang, Yidan
Yao, Wen
Source :
Bioinformatics. Apr2018, Vol. 34 Issue 7, p1229-1231. 3p.
Publication Year :
2018

Abstract

Creation of Circos plot is one of the most efficient approaches to visualize genomic data. However, the installation and use of existing tools to make Circos plot are challenging for users lacking of coding experiences. To address this issue, we developed an R/Shiny application shinyCircos, a graphical user interface for interactive creation of Circos plot. shinyCircos can be easily installed either on computers for personal use or on local or public servers to provide online use to the community. Furthermore, various types of Circos plots could be easily generated and decorated with simple mouse-click. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
13674803
Volume :
34
Issue :
7
Database :
Academic Search Index
Journal :
Bioinformatics
Publication Type :
Academic Journal
Accession number :
128940100
Full Text :
https://doi.org/10.1093/bioinformatics/btx763