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Genetic programming based models in plant tissue culture: An addendum to traditional statistical approach.

Authors :
Mridula, Meenu R.
Nair, Ashalatha S.
Kumar, K. Satheesh
Source :
PLoS Computational Biology. 2/27/2018, Vol. 14 Issue 2, p1-13. 13p. 2 Color Photographs, 6 Charts, 6 Graphs.
Publication Year :
2018

Abstract

In this paper, we compared the efficacy of observation based modeling approach using a genetic algorithm with the regular statistical analysis as an alternative methodology in plant research. Preliminary experimental data on in vitro rooting was taken for this study with an aim to understand the effect of charcoal and naphthalene acetic acid (NAA) on successful rooting and also to optimize the two variables for maximum result. Observation-based modelling, as well as traditional approach, could identify NAA as a critical factor in rooting of the plantlets under the experimental conditions employed. Symbolic regression analysis using the software deployed here optimised the treatments studied and was successful in identifying the complex non-linear interaction among the variables, with minimalistic preliminary data. The presence of charcoal in the culture medium has a significant impact on root generation by reducing basal callus mass formation. Such an approach is advantageous for establishing in vitro culture protocols as these models will have significant potential for saving time and expenditure in plant tissue culture laboratories, and it further reduces the need for specialised background. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
1553734X
Volume :
14
Issue :
2
Database :
Academic Search Index
Journal :
PLoS Computational Biology
Publication Type :
Academic Journal
Accession number :
128208230
Full Text :
https://doi.org/10.1371/journal.pcbi.1005976