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Transcriptome-wide association study revealed two novel genes associated with nonobstructive azoospermia in a Chinese population.

Authors :
Jiang, Tingting
Wang, Yuzhuo
Zhu, Meng
Wang, Yifeng
Huang, Mingtao
Jin, Guangfu
Guo, Xuejiang
Sha, Jiahao
Dai, Juncheng
Hu, Zhibin
Source :
Fertility & Sterility. Dec2017, Vol. 108 Issue 6, p1056-1056. 1p.
Publication Year :
2017

Abstract

<bold>Objective: </bold>To investigate the associations between genetically cis-regulated gene expression levels and nonobstructive azoospermia (NOA) susceptibility.<bold>Design: </bold>Transcriptome-wide association study (TWAS).<bold>Setting: </bold>Medical university.<bold>Interventions: </bold>None.<bold>Main Outcome Measure(s): </bold>The cis-hg2 values for each gene were estimated with GCTA software. The effect sizes of cis-single-nucleotide polymorphisms (SNPs) on gene expression were measured using GEMMA software. Gene expression levels were entered into our existing NOA GWAS cohort using GEMMA software. The TWAS P-values were calculated using logistic regression models.<bold>Result(s): </bold>Expression levels of 1,296 cis-heritable genes were entered into our existing NOA GWAS data. The TWAS results identified two novel genes as statistically significantly associated with NOA susceptibility: PILRA and ZNF676. In addition, 6p21.32, previously reported in NOA GWAS, was further validated to be a susceptible region to NOA risk.<bold>Conclusion(s): </bold>Analysis with TWAS provides fruitful targets for follow-up functional studies. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
00150282
Volume :
108
Issue :
6
Database :
Academic Search Index
Journal :
Fertility & Sterility
Publication Type :
Academic Journal
Accession number :
126618152
Full Text :
https://doi.org/10.1016/j.fertnstert.2017.09.023