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Changes in related circular RNAs following ERβ knockdown and the relationship to rBMSC osteogenesis.

Authors :
Li, Xiaoyun
Peng, Bojia
Zhu, Xiaofeng
Wang, Panpan
Xiong, Yingquan
Liu, Hengrui
Sun, Kehuan
Wang, Haixia
Ou, Ling
Wu, Zhidi
Liu, Xiaoguang
He, Haibin
Mo, Shu
Peng, Xunqian
Tian, Ya
Zhang, Ronghua
Yang, Li
Source :
Biochemical & Biophysical Research Communications. Nov2017, Vol. 493 Issue 1, p100-107. 8p.
Publication Year :
2017

Abstract

Recently, several studies have indicated that circular RNAs (circRNAs) play significant roles in various disease; however, little is known about the chronology of estrogen receptor beta (ERβ) deficiency and altered circRNA expression, or their relationship with osteogenesis. Herein, we show through western-blot and quantitative real-time PCR assays, that when ERβ is silenced, the expression of osteogenesis-related proteins and mRNAs were down-regulated. We then performed RNA-Seq to analyze differential circRNA expression between the control and ERβ knockdown group. This analysis revealed that, 146 circRNAs were differentially expressed by fold-change≥2.0, p ≤ 0.05, and, among this group, 68 circRNAs were down-regulated, while 78 were up-regulated. Gene ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG) and PANTHER pathway analyses were performed to predict the function of these differentially expressed circRNAs. Finally, co-expressed targets gene, and circRNA-microRNA network were constructed for predicted miRNA sponges. This research suggested that ERβ may through 2:27713879|27755789/2:240822115|240867796-miR-328-5p-mRNA axis to regulate osteogenic differentiation. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
0006291X
Volume :
493
Issue :
1
Database :
Academic Search Index
Journal :
Biochemical & Biophysical Research Communications
Publication Type :
Academic Journal
Accession number :
125545709
Full Text :
https://doi.org/10.1016/j.bbrc.2017.09.068