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Development of the method for identification of selected populations of torpedo scad, Megalaspis cordyla (Linnaeus, 1758), using microsatellite DNA analyses. CELFISH project – Part 4.

Authors :
Jolanta, Kempter
Maciej, Kielpinski
Remigiusz, Panicz
Prüffer, Kaja
Sławomir, Keszka
Source :
Food Chemistry. Apr2017, Vol. 221, p944-949. 6p.
Publication Year :
2017

Abstract

Catch and consumption of torpedo scad ( Megalaspis cordyla ) over the western Indian Ocean, but also the western Pacific from Japan to Australia is constantly increasing. Taking into account the degree of exploitation and missing information on the population structure of torpedo scad stocks it is crucial to provide population data. The analysis included individuals obtained in 2012 and 2013 from local markets in Madagascar, Tanzania, Vietnam and Cambodia and after successful DNA extraction fragment of the nuclear rhodopsin gene (RH1) and 9 microsatellite regions (SSRs) were amplified and analysed. Based on the obtained results it was found that there was no 100% overlap between the compared RH1 sequences and those from GenBank. In the case of the studied SSRs, the results allowed the initial characterisation and assessment of the genetic diversity of populations. Moreover, population assignment test distinguished the studied populations into two geographically distant subpopulations. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
03088146
Volume :
221
Database :
Academic Search Index
Journal :
Food Chemistry
Publication Type :
Academic Journal
Accession number :
120159150
Full Text :
https://doi.org/10.1016/j.foodchem.2016.11.070