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Characterization of Viral Populations by Using Circular Sequencing.

Authors :
Whitfield, Zachary J.
Andino, Raul
Source :
Journal of Virology. Oct2016, Vol. 90 Issue 20, p8950-8953. 4p.
Publication Year :
2016

Abstract

With the enormous sizes viral populations reach, many variants are at too low a frequency to be detected by conventional nextgeneration sequencing (NGS) methods. Circular sequencing (CirSeq) is a method by which the error rate of next-generation sequencing is decreased so that even low-frequency viral variants can be accurately detected. The ability to visualize almost the entire genetic makeup of a viral swarm has implications for epidemiology, viral evolution, and vaccine design. Here we discuss experimental planning, analysis, and recent insights using CirSeq. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
0022538X
Volume :
90
Issue :
20
Database :
Academic Search Index
Journal :
Journal of Virology
Publication Type :
Academic Journal
Accession number :
118557131
Full Text :
https://doi.org/10.1128/JVI.00804-14