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Genomic Landscape Survey Identifies SRSF1 as a Key Oncodriver in Small Cell Lung Cancer.

Authors :
Jiang, Liyan
Huang, Jiaqi
Higgs, Brandon W.
Hu, Zhibin
Xiao, Zhan
Yao, Xin
Conley, Sarah
Zhong, Haihong
Liu, Zheng
Brohawn, Philip
Shen, Dong
Wu, Song
Ge, Xiaoxiao
Jiang, Yue
Zhao, Yizhuo
Lou, Yuqing
Morehouse, Chris
Zhu, Wei
Sebastian, Yinong
Czapiga, Meggan
Source :
PLoS Genetics. 4/19/2016, Vol. 12 Issue 4, p1-22. 22p.
Publication Year :
2016

Abstract

Small cell lung cancer (SCLC) is an aggressive disease with poor survival. A few sequencing studies performed on limited number of samples have revealed potential disease-driving genes in SCLC, however, much still remains unknown, particularly in the Asian patient population. Here we conducted whole exome sequencing (WES) and transcriptomic sequencing of primary tumors from 99 Chinese SCLC patients. Dysregulation of tumor suppressor genes TP53 and RB1 was observed in 82% and 62% of SCLC patients, respectively, and more than half of the SCLC patients (62%) harbored TP53 and RB1 mutation and/or copy number loss. Additionally, Serine/Arginine Splicing Factor 1 (SRSF1) DNA copy number gain and mRNA over-expression was strongly associated with poor survival using both discovery and validation patient cohorts. Functional studies in vitro and in vivo demonstrate that SRSF1 is important for tumorigenicity of SCLC and may play a key role in DNA repair and chemo-sensitivity. These results strongly support SRSF1 as a prognostic biomarker in SCLC and provide a rationale for personalized therapy in SCLC. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
15537390
Volume :
12
Issue :
4
Database :
Academic Search Index
Journal :
PLoS Genetics
Publication Type :
Academic Journal
Accession number :
114635650
Full Text :
https://doi.org/10.1371/journal.pgen.1005895