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Working draft genome sequence of the mesophilic acetate oxidizing bacterium Syntrophaceticus schinkii strain Sp3.

Authors :
Manzoor, Shahid
Müller, Bettina
Niazi, Adnan
Schnürer, Anna
Bongcam-Rudloff, Erik
Source :
Standards in Genomic Sciences. 11/11/2015, Vol. 10 Issue 1, p1-8. 8p.
Publication Year :
2015

Abstract

Syntrophaceticus schinkii strain Sp3 is a mesophilic syntrophic acetate oxidizing bacterium, belonging to the Clostridia class within the phylum Firmicutes, originally isolated from a mesophilic methanogenic digester. It has been shown to oxidize acetate in co-cultivation with hydrogenotrophic methanogens forming methane. The draft genome shows a total size of 3,196,921 bp, encoding 3,688 open reading frames, which includes 3,445 predicted protein-encoding genes and 55 RNA genes. Here, we are presenting assembly and annotation features as well as basic genomic properties of the type strain Sp3. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
19443277
Volume :
10
Issue :
1
Database :
Academic Search Index
Journal :
Standards in Genomic Sciences
Publication Type :
Academic Journal
Accession number :
110861027
Full Text :
https://doi.org/10.1186/s40793-015-0092-z