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Complete genome sequences of Geobacillus sp. Y412MC52, a xylan-degrading strain isolated from obsidian hot spring in Yellowstone National Park.

Authors :
Brumm, Phillip
Land, Miriam
Hauser, Loren
Jeffries, Cynthia
Chang, Yun-Juan
Mead, David
Source :
Standards in Genomic Sciences. 10/19/2015, Vol. 10 Issue 1, p1-9. 9p.
Publication Year :
2015

Abstract

Geobacillus sp. Y412MC52 was isolated from Obsidian Hot Spring, Yellowstone National Park, Montana, USA under permit from the National Park Service. The genome was sequenced, assembled, and annotated by the DOE Joint Genome Institute and deposited at the NCBI in December 2011 (CP002835). Based on 16S rRNA genes and average nucleotide identity, Geobacillus sp. Y412MC52 and the related Geobacillus sp. Y412MC61 appear to be members of a new species of Geobacillus. The genome of Geobacillus sp. Y412MC52 consists of one circular chromosome of 3,628,883 bp, an average G + C content of 52 % and one circular plasmid of 45,057 bp and an average G + C content of 45 %. Y412MC52 possesses arabinan, arabinoglucuronoxylan, and aromatic acid degradation clusters for degradation of hemicellulose from biomass. Transport and utilization clusters are also present for other carbohydrates including starch, cellobiose, and α- and β-galactooligosaccharides. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
19443277
Volume :
10
Issue :
1
Database :
Academic Search Index
Journal :
Standards in Genomic Sciences
Publication Type :
Academic Journal
Accession number :
110426817
Full Text :
https://doi.org/10.1186/s40793-015-0075-0