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SANCDB: a South African natural compound database.

Authors :
Hatherley, Rowan
Brown, David K.
Musyoka, Thommas M.
Penkler, David L.
Faya, Ngonidzashe
Lobb, Kevin A.
Bishop, Özlem Tastan
Source :
Journal of Cheminformatics. 2015, Vol. 7 Issue 1, p1-9. 9p.
Publication Year :
2015

Abstract

Background: Natural products (NPs) are important to the drug discovery process. NP research efforts are expanding world-wide and South Africa is no exception to this. While freely-accessible small molecule databases, containing compounds isolated from indigenous sources, have been established in a number of other countries, there is currently no such online database in South Africa. Description: The current research presents a South African natural compound database, named SANCDB. This is a curated and fully-referenced database containing compound information for 600 natural products extracted directly from journal articles, book chapters and theses. There is a web interface to the database, which is simple and easy to use, while allowing for compounds to be searched by a number of different criteria. Being fully referenced, each compound page contains links to the original referenced work from which the information was obtained. Further, the website provides a submission pipeline, allowing researchers to deposit compounds from their own research into the database. Conclusions: SANCDB is currently the only web-based NP database in Africa. It aims to provide a useful resource for the in silico screening of South African NPs for drug discovery purposes. The database is supported by a submission pipeline to allow growth by entries from researchers. As such, we currently present SANCDB the starting point of a platform for a community-driven, curated database tofurther natural products research in South Africa. SANCDB is freely available at https://sancdb.rubi.ru.ac.za/. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
17582946
Volume :
7
Issue :
1
Database :
Academic Search Index
Journal :
Journal of Cheminformatics
Publication Type :
Academic Journal
Accession number :
108265179
Full Text :
https://doi.org/10.1186/s13321-015-0080-8