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GWAS of longevity in CHARGE consortium confirms APOE and FOXO3 candidacy.

Authors :
Broer, Linda
Buchman, Aron S
Deelen, Joris
Evans, Daniel S
Faul, Jessica D
Lunetta, Kathryn L
Sebastiani, Paola
Smith, Jennifer A
Smith, Albert V
Tanaka, Toshiko
Yu, Lei
Arnold, Alice M
Aspelund, Thor
Benjamin, Emelia J
De Jager, Philip L
Eirkisdottir, Gudny
Evans, Denis A
Garcia, Melissa E
Hofman, Albert
Kaplan, Robert C
Source :
Journals of Gerontology Series A: Biological Sciences & Medical Sciences. Jan2015, Vol. 70 Issue 1, p110-118. 9p.
Publication Year :
2015

Abstract

<bold>Background: </bold>The genetic contribution to longevity in humans has been estimated to range from 15% to 25%. Only two genes, APOE and FOXO3, have shown association with longevity in multiple independent studies.<bold>Methods: </bold>We conducted a meta-analysis of genome-wide association studies including 6,036 longevity cases, age ≥90 years, and 3,757 controls that died between ages 55 and 80 years. We additionally attempted to replicate earlier identified single nucleotide polymorphism (SNP) associations with longevity.<bold>Results: </bold>In our meta-analysis, we found suggestive evidence for the association of SNPs near CADM2 (odds ratio [OR] = 0.81; p value = 9.66 × 10(-7)) and GRIK2 (odds ratio = 1.24; p value = 5.09 × 10(-8)) with longevity. When attempting to replicate findings earlier identified in genome-wide association studies, only the APOE locus consistently replicated. In an additional look-up of the candidate gene FOXO3, we found that an earlier identified variant shows a highly significant association with longevity when including published data with our meta-analysis (odds ratio = 1.17; p value = 1.85×10(-10)).<bold>Conclusions: </bold>We did not identify new genome-wide significant associations with longevity and did not replicate earlier findings except for APOE and FOXO3. Our inability to find new associations with survival to ages ≥90 years because longevity represents multiple complex traits with heterogeneous genetic underpinnings, or alternatively, that longevity may be regulated by rare variants that are not captured by standard genome-wide genotyping and imputation of common variants. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
10795006
Volume :
70
Issue :
1
Database :
Academic Search Index
Journal :
Journals of Gerontology Series A: Biological Sciences & Medical Sciences
Publication Type :
Academic Journal
Accession number :
103864692
Full Text :
https://doi.org/10.1093/gerona/glu166