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In wild animal populations, there is a differentiation between populations due to natural selection. The direction and pressure of natural selection in the wild sheep are different in the various geographic areas. Linkage disequilibrium studies showed that regions of the genome in whole wild sheep are under natural selection and that natural selection can affect immune or reproductive or metabolic traits. The study aimed to identify genomic regions under natural selection in wild sheep. For this purpose, the genetic information of 24 European wild sheep and 24 Sardinian wild sheep was used. The genotypes were determined using Illumina 50 K SNPChip arrays based on Oar_4.0 version of the sheep genome. After quality control steps, finally, 31,560 SNP markers were analyzed. The value of LD was calculated by calculating the r2 statistic between all pairs of locations through PLINK software. To identify signs of selection based on linkage disequilibrium methods, an extended haplotype homozygosity test of XP-EHH crossing population and iHS intrapopulation was used. The results of iHS studies showed that in European and Sardinian wild sheep, the highest iHS coefficient under natural selection was observed on 3 and 2 chromosome numbers, respectively. Also, the results of XP-EHH studies showed that the largest XP-EHH coefficients under natural selection in European wild sheep compared to Sardinian and vice versa in Sardinian wild sheep compared to European wild sheep were observed on 3 and 16 chromosome numbers, respectively. In addition, the results of gene cycle studies showed that COPB1, SEC24D, ZDHHC17, BBS4, RFX3, SLC26A8, CAMK2D, GRIA1, GRM1, GRID2, PPP2R1A, CPEB4, PLEKHA5 and KIF13A, VPS39, VPS53, DTNBP1, DYNC1I1, FAM91A genes are under natural selection in Sardinian and European wild sheeps, respectively. The direction and selection pressure of natural selection in the two breeds of wild sheep is different due to different geographic conditions. [ABSTRACT FROM AUTHOR]

Purpose: Cryptosporidium is an intestinal zoonotic protozoan parasite that infects domesticated and wild animals. There are no reports on the prevalence and molecular characterisation of Cryptosporidium in the endemic Cyprus mouflon. The mouflon is strictly protected by national and international legislation. Its main distribution is Paphos State Forest and surrounding areas, where it may share the same water sources as free-ranging domestic goats. Therefore, the present study aimed to determine the prevalence of Cryptosporidium spp. and genotypes in mouflon and free-ranging goats within the mouflon range. Methods: Faecal samples of 70 mouflons and 34 free-ranging goats were screened for Cryptosporidium by PCR amplification and sequencing. Results: Only one sample (1/70) belonging to a mouflon was PCR positive for Cryptosporidium. Based on sequencing of the 18S rRNA locus, this species was identified as Cryptosporidium parvum (C. parvum). No positive sample was detected in the free-ranging goats (0/34). Conclusion: This is the first report on the molecular identification of this Cryptosporidium species in a Cyprus mouflon. The results indicate that the prevalence of Cryptosporidium in Cyprus mouflon is low. [ABSTRACT FROM AUTHOR]

Introduction[1]: Over the years, animals have been exposed to various factors such as natural selection, genetic drift, and multiple mutations, so such factors have caused changes between and within species. The genetic mutations that occur in the populations of domestic animals, will be added to the merits of animals who contain these genetic mutations and they will have more breeds. These mutations are also repeated in their breeds. If a new SNP in a population increases the competence of its carriers compared to other members of society, this choice will make the more deserving individual more involved in shaping the next generation. The most important statistical tests based on demographic differentiation are the FST statistics, which identify distinct positions under positive selection, which are of particular importance for economic characteristics. One of the best ways to understand physiological processes is to analyze gene regulation networks. Identification of genes involved in economic traits as molecular markers in breeding is of special importance. Gene regulation networks enable the researcher to study all of the genes together. The aim of this study was to identify selection signature regions and candidate genes related to economic traits.Materials and Methods: The necessary data for this research were acquired from two sources, namely NEXTGEN and HAPMAP. The dataset encompassed breeds such as Afshari (41 individuals), Ghezel (35 individuals), Moghani (35 individuals), and eight wild sheep. The initial objective was to assess data quality and perform filtration on raw data. For the remaining single nucleotide polymorphisms (SNPs), those not conforming to Hardy-Weinberg equilibrium were considered indicative of genotyping errors. A stringent probability level of 10⁻⁶, determined through Bonferroni correction, was applied. Various stages of quality control were meticulously executed using PLINK v1.9. Additionally, the study involved identifying animals positioned outside their respective groups, contributing to a comprehensive understanding of the population structure within the two groups. Principal component analysis (PCA) were done in R software. The FST index was proposed to study the distinction between subpopulations and identification of selection signature. the population structure of wild and domestic sheep breeds was analyzed. PCA analysis was performed using genotype information of the samples to investigate how the animals were grouped Investigation of identified genes using SNPs in the upper 1% range of FST were identified by Plink v1.9 software. In addition, the DAVID database (http://david.abcc.ncifcrf.gov) was used to determine biological routes. At this stage, it is assumed that genes that belong to a functional class can be considered as a group of genes that have some specific and common characteristics. GeneCards (http://www.genecards.org) and UniProtKB (http://www.uniprot.org) databases were also used to interpret the function of the obtained genes.Results and Discussion: The results showed that adjacent SNPs are highly dispersed in several genomic regions. From 34556 SNPs after filtration above 1%, SNPs with higher FST stabilization index (340 SNP) with FST range from 0.304 to 0.472 were selected. Selected SNPs consisted of 95 genomic regions on 23 chromosomes between domestic and wild sheep. Most regions were located on chromosomes 13 and 7 had 14 and 9 gene regions, respectively. Examination of the relationship between QTLs and important genes in selected areas showed that 95 genes related to economic traits were identified. QTLs with important economic characteristics including quality and quantity of meat, milk, fat, bone, immune system and parasite resistance were reported. Most QTLs were located on chromosomes 2, 3, 5, 6, and 7, indicating that the most positive mutations occurred on these chromosomes. Most of the identified biological pathways related to ion channels through cell membranes are neuromuscular processes, Brain and cerebellum growth, metencephalon growth, membrane ion membrane transport, and pathways involved in regulating ion transport in cell membranes. Genes identified in different genomic regions can be considered as selective candidates. A number of genes studied as selection signatures reported were consistent with previous studies. Important genes were included: GABRB1, GRM3, HERC1, HERC3 and KCND2.Conclusion: The study of genomic regions showed that these regions are directly and indirectly related to the quality and quantity of meat, milk, fat, bone, immune system and parasite resistance. Identifying important economic traits and locating parts of the genome that have changed as a result of selection could be used in sheep breeding programs. However, in this research we had limitations such as the incompleteness of information related to functional annotation of genes in sheep species and also the small sample size of this study. Therefore, in subsequent studies with more samples and more breeds of domestic and wild sheep in Iran, a better understanding of candidate genes for important economic traits in domestic and wild species would be achieved.

Contagious Ecthyma is an infectious disease of sheep and goats that causes dermatitis primarily on the lips, mouth and muzzle. In this article, we describe a case report of Contagious Ecthyma in a wild sheep (Ovis orientalis) in Fars province of Iran. One wild lamb was found in the border of Bamou National Park near human communities. The lamb died during the transfer to the rehabilitation center. Gross lesions were characterized by multifocal scabs, proliferative and crusty wart-like multiple lesions on the muzzle, nose, between the eyes, ears, neck and coronary band. Skin samples were taken from lesions and sent to the collaborator laboratory of Veterinary Organization for DNA extraction and analysis by PCR tests. Laboratory results confirmed Contagious Ecthyma (Orf) virus in the wild sheep. This is the first documented report of Orf in wild sheep from Bamou National Park.

The Punjab urial (Ovis vignei punjabiensis) is endemic to Northern Punjab, Pakistan, and is categorized as vulnerable by the International Union for Conservation of Nature Red List of Threatened Species. The urial population has declined by 30% over the last 3 generations. We used non‐invasive fecal samples to identify individuals and estimate population size of Punjab urial in the Kalabagh Game Reserve, Pakistan. We genotyped samples using 12 microsatellite markers to assess genetic variation, population structure, and demographic changes. Microsatellite analysis revealed high levels of genetic variation in urials in terms of expected and observed heterozygosity and allelic diversity. The population structure of the Punjab urial in the Kalabagh Game Reserve, based solely on microsatellite variation using Bayesian clustering, indicated 3 different clusters in the reserve. Results revealed that the urial population may be facing inbreeding pressure because its ancestral effective population size has declined from between 20,000 and 50,000 to ≤1,000 animals today. This reduction has partly occurred because of a bottleneck that occurred about 10,000 years ago. Results also indicate that 1 urial population cluster has the signature of a bottleneck, which may be due to population isolation. The 3 urial clusters are small and broadly dispersed in a large territory, meaning they could be extirpated without any opportunity for natural re‐population through dispersion. The results of our study support a management strategy that encourages maintaining connectivity between urial localities within the Kalabagh Game Reserve, increased diversity so the effective population size may recover from the historical decline, and the use of data generated here as a baseline of urial genetic diversity in the reserve for monitoring diversity over the long term. [ABSTRACT FROM AUTHOR]

Habitat eradication and loss of animal species have created a new international hazard for wildlife conservation. National parks are considered as suitable places that can serve dual functions of biodiversity conservation and ecotourism. As recommended by the Food and Agriculture Organization (FAO), microsatellites have been used for animal biodiversity assessment. For this reason, Iranian urials population genetic diversity was studied by analyzing of 10 microsatellite markers in 75 skeletal muscle samples that were collected from Tandooreh National Park, Northeastern of Iran. Species of samples validated by sequencing of the control region from mtDNA. Allelic frequencies for each locus in the population and different measurements of within-breed genetic variations were computed by the POPGENE32 software. The number of alleles per locus counted from 5 to 8, with an average of 6.1. The polymorphism information content was calculated between 0.66-0.74 with the average of 0.7. Observed heterozygosity ranged from 0.223 (MaF214) to 0.776 (OarFCB128) with an average about 0.584 while the average expected heterozygosity for all studied loci was 0.785 ranging from 0.765 (BM8125) to 0.807 (MaF36). High levels of expected heterozygosity can be attributed to some factors such as low level of inbreeding, low selection pressure, and high allele number. However, findings of the present study of the high variability of the Iranian urials showed the presence of a possible ‘hot spot’ genetic diversity for wild urial population in the Northeast of Iran. In conclusion, values of genetic diversity revealed that the Iranian urial population harbor unique and appreciable reservoirs of diversity.

We describe temporal and spatial patterns of seasonal space-use and migration by 16 GPS-collared Stone's sheep (Ovis dalli stonei) from nine bands in the Cassiar Mountains of northern British Columbia, Canada. Our objectives were to identify the timing of spring and fall migrations, characterize summer and winter ranges, map and describe migration routes and use of stopover sites, and document altitudinal change across seasons. Our last objective was to assess individual migration strategies based on patterns of geographic migration, altitudinal migration, or residency. Median start and end dates of the spring migration were 12 and 17 Jun (range: 20 May to 05 Aug), and of the fall migration were 30 Aug and 22 Sep (range: 21 Aug to 07 Jan). The median area of winter and summer ranges for geographic migrants were 630.8 ha and 2,829.0 ha, respectively, with a broad range from about 233.6 to 10,196.2 ha. Individuals showed high fidelity to winter ranges over the limited duration of the study. The winter and summer ranges of most individuals (n = 15) were at moderate to high elevations with a median summer elevation of 1,709 m (1,563-1,827 m) and 1,673 m (1,478-1,751 m) that varied <150 m between ranges. Almost all collared females (n = 14) exhibited changes in elevation use that coincide with abbreviated altitudinal migration. Specifically, these females descended to lower spring elevations from their winter range (Δ > 150 m), and then gradually moved up to higher-elevation summer ranges (Δ > 150 m). In the fall, they descended to lower elevations (Δ > 100 m) before returning to their higher winter ranges. The median distance travelled along geographic migration routes was 16.3 km (range: 7.6-47.4 km). During the spring migration, most geographic migrants (n = 8) used at least one stopover site (median = 1.5, range: 0-4), while almost all migrants (n = 11) used stopover sites more frequently in the fall (median = 2.5, range: 0-6). Of the 13 migratory individuals that had at least one other collared individual in their band, most migrated at about the same time, occupied the same summer and winter ranges, used similar migration routes and stopover sites, and exhibited the same migration strategy. We found collared females exhibited four different migration strategies which mostly varied across bands. Migration strategies included long-distance geographic migrants (n = 5), short-distance geographic migrants (n = 5), vacillating migrants (n = 2), and abbreviated altitudinal migrants (n = 4). Different migratory strategies occurred within one band where one collared individual migrated and two did not. We conclude that female Stone's sheep in the Cassiar Mountains displayed a diverse assemblage of seasonal habitat use and migratory behaviors. By delineating seasonal ranges, migration routes and stopover sites, we identify potential areas of priority that can help inform land-use planning and preserve the native migrations of Stone's sheep in the region. [ABSTRACT FROM AUTHOR]

Contagious Ecthyma is an infectious disease of sheep and goats that causes dermatitis primarily on the lips, mouth and muzzle. In this article, we describe a case report of Contagious Ecthyma in a wild sheep (Ovis orientalis) in Fars province of Iran. One wild lamb was found in the border of Bamou National Park near human communities. The lamb died during the transfer to the rehabilitation center. Gross lesions were characterized by multifocal scabs, proliferative and crusty wart-like multiple lesions on the muzzle, nose, between the eyes, ears, neck and coronary band. Skin samples were taken from lesions and sent to the collaborator laboratory of Veterinary Organization for DNA extraction and analysis by PCR tests. Laboratory results confirmed Contagious Ecthyma (Orf) virus in the wild sheep. This is the first documented report of Orf in wild sheep from Bamou National Park. [ABSTRACT FROM AUTHOR]

Argali (Ovis ammon), the largest species among all wild sheep, is native to mountainous regions of Central and East Asia, spreading mainly throughout such countries as Tajikistan, Kyrgyzstan, Kazakhstan, Afghanistan, Mongolia, Russia and China. Intraspecific taxonomy of argali remains unclear, and currently, most researchers recognize up to nine subspecies. The aim of our work was to investigate the phylogenetic relationship between populations of O. ammon based on genome-wide SNP analysis. Five subspecies, Altai (O. a. ammon) (n = 6), Gobi (O. a. darwini) (n = 5), Pamir (O. a. polii) (n = 12), Tian Shan (O.a. karelini) (n = 15) and Kyzylkum (O. a. severtzovi) (n = 4), were genotyped using Illumina OvineHD BeadChip. In addition, complete mitogenome sequences from 30 of those samples were obtained. After quality control procedures, 65,158 SNPs were selected for the subsequent analyses. Neighbor-Net dendrogram and principal component analysis (PCA) revealed that the five subspecies could be grouped into four clusters. It was shown that a population from Altai formed a cluster with Gobi subspecies. The highest pairwise FST genetic distance was between O. a. ammon and O. a. severtzovi (0.421) and the lowest were between O. a. polii and O.a. karelini (0.083) and between O. a. ammon and O. a. darwini (0.040) subspecies. Genetic diversity was higher in Central Asian argali as compared to East Asian populations. O. a. severtzovi had an admixed origin and consisted of two genetic components—73.5 ± 0.2% of O. a. polli and 26.5 ± 0.2% of urial (O. vignei). TreeMix analysis revealed a migration event from urial to O. a. severtzovi argali. The analysis of complete mitogenomes supported the results based on whole-genome genotyping. Considering that all the mtDNA sequences of O. a severtzovi belonged to O. ammon and not to O. vignei, we concluded that gene flow in this group was associated with urial males. As this is only the first work on intraspecific taxonomy and genetic diversity of argali based on genome-wide SNP genotyping and the analysis of complete mitogenomes, we suggest that more genetic studies are needed to clarify the status of Gobi and Tian Shan argali. [ABSTRACT FROM AUTHOR]

We describe temporal and spatial patterns of seasonal space-use and migration by 16 GPS-collared Stone’s sheep (Ovis dalli stonei) from nine bands in the Cassiar Mountains of northern British Columbia, Canada. Our objectives were to identify the timing of spring and fall migrations, characterize summer and winter ranges, map and describe migration routes and use of stopover sites, and document altitudinal change across seasons. Our last objective was to assess individual migration strategies based on patterns of geographic migration, altitudinal migration, or residency. Median start and end dates of the spring migration were 12 and 17 Jun (range: 20 May to 05 Aug), and of the fall migration were 30 Aug and 22 Sep (range: 21 Aug to 07 Jan). The median area of winter and summer ranges for geographic migrants were 630.8 ha and 2,829.0 ha, respectively, with a broad range from about 233.6 to 10,196.2 ha. Individuals showed high fidelity to winter ranges over the limited duration of the study. The winter and summer ranges of most individuals (n = 15) were at moderate to high elevations with a median summer elevation of 1,709 m (1,563–1,827 m) and 1,673 m (1,478–1,751 m) that varied 150 m), and then gradually moved up to higher-elevation summer ranges (Δ > 150 m). In the fall, they descended to lower elevations (Δ > 100 m) before returning to their higher winter ranges. The median distance travelled along geographic migration routes was 16.3 km (range: 7.6–47.4 km). During the spring migration, most geographic migrants (n = 8) used at least one stopover site (median = 1.5, range: 0–4), while almost all migrants (n = 11) used stopover sites more frequently in the fall (median = 2.5, range: 0–6). Of the 13 migratory individuals that had at least one other collared individual in their band, most migrated at about the same time, occupied the same summer and winter ranges, used similar migration routes and stopover sites, and exhibited the same migration strategy. We found collared females exhibited four different migration strategies which mostly varied across bands. Migration strategies included long-distance geographic migrants (n = 5), short-distance geographic migrants (n = 5), vacillating migrants (n = 2), and abbreviated altitudinal migrants (n = 4). Different migratory strategies occurred within one band where one collared individual migrated and two did not. We conclude that female Stone’s sheep in the Cassiar Mountains displayed a diverse assemblage of seasonal habitat use and migratory behaviors. By delineating seasonal ranges, migration routes and stopover sites, we identify potential areas of priority that can help inform land-use planning and preserve the native migrations of Stone’s sheep in the region.

The emergence of antimicrobial resistance and the emergence of novel pathogens pose a serious threat to public health and animals around the world. Peppermint (Mentha piperita) has a variety of therapeutic features, one of which is an antibacterial property that can be helpful in preventing infections in wildlife. This property can be found in the extracts of both the stem and the leaf of the plant. In the current investigation, an extract of Mentha piperita (M. piperita) or clocally named as peppermint stem and leaf was produced in methanol at a concentration of 70 percent to test its effectiveness as an antibacterial agent against three Gramnegative bacteria. i.e. Escherichia coli (E. coli), Salmonella Typhimurium (S. Typhimurium) and Pseudomonas aeruginosa (P. aeruginosa) and against one Gram-positive Bacteria Staphylococcus aureus (S. aureus). Fresh feces and skin swab samples were taken from wild sheep in the Wildlife Park Gatwala, Faisalabad, during February 2022. The isolated strains of bacteria were identified and confirmed microbiologically. Peppermint (stem and leaf) extracts prepared with methanol were examined for their efficacy against the identified pathogens. The extracts demonstrated higher inhibitory zones (leaf: 17.5mm, stem:16mm) against S. aureus. S. Typhimurium, P. aeruginosa and E. coli. The leaf extract showed zones of inhibition of 16.5, 16, 15.5 and 13mm while stem extract produced zones of inhibition of 15.5, 14, 16.5, 15mm against S. aureus. S. Typhimurium, P. aeruginosa and E. coli, respectively. Furthermore, the broth dilution method revealed that the MIC of peppermint (stem and leaf) was 0.4mg/ml against all tested bacterial strains. Altogether, these findings indicate that peppermint extracts may be useful in combating common bacterial infections of wild sheep. [ABSTRACT FROM AUTHOR]

Habitat eradication and loss of animal species have created a new international hazard for wildlife conservation. National parks are considered as suitable places that can serve dual functions of biodiversity conservation and ecotourism. As recommended by the Food and Agriculture Organization (FAO) and ISAG, microsatellites have been used for animal biodiversity assessment. For this reason, Iranian urials population genetic diversity was studied by analyzing of 10 microsatellite markers in 75 skeletal muscle samples that were collected from Tandooreh National Park, Northeastern of Iran. Species of samples validated by sequencing of the control region from mtDNA. Allelic frequencies for each locus in the population and different measurements of within-breed genetic variations were computed by the POPGENE32 software. The number of alleles per locus counted from five to eight, with an average of 6.1. The polymorphism information content was calculated between 0.66-0.74 with the average of 0.7. Observed heterozygosity ranged from 0.223 (MaF214) to 0.776 (OarFCB128) with an average about 0.584 while the average expected heterozygosity for all studied loci was 0.785 ranging from 0.765 (BM8125) to 0.807 (MaF36). High levels of expected heterozygosity can be attributed to some factors such as low level of inbreeding, low selection pressure, and high allele number. However, findings of the present study of the high variability of the Iranian urials showed the presence of a possible 'hot spot' genetic diversity for wild urial population in the Northeast of Iran. In conclusion, values of genetic diversity revealed that the Iranian urial population harbor unique and appreciable reservoirs of diversity. [ABSTRACT FROM AUTHOR]

Argali (Ovis ammon), the largest species among all wild sheep, is native to mountainous regions of Central and East Asia, spreading mainly throughout such countries as Tajikistan, Kyrgyzstan, Kazakhstan, Afghanistan, Mongolia, Russia and China. Intraspecific taxonomy of argali remains unclear, and currently, most researchers recognize up to nine subspecies. The aim of our work was to investigate the phylogenetic relationship between populations of O. ammon based on genome-wide SNP analysis. Five subspecies, Altai (O. a. ammon) (n = 6), Gobi (O. a. darwini) (n = 5), Pamir (O. a. polii) (n = 12), Tian Shan (O.a. karelini) (n = 15) and Kyzylkum (O. a. severtzovi) (n = 4), were genotyped using Illumina OvineHD BeadChip. In addition, complete mitogenome sequences from 30 of those samples were obtained. After quality control procedures, 65,158 SNPs were selected for the subsequent analyses. Neighbor-Net dendrogram and principal component analysis (PCA) revealed that the five subspecies could be grouped into four clusters. It was shown that a population from Altai formed a cluster with Gobi subspecies. The highest pairwise FST genetic distance was between O. a. ammon and O. a. severtzovi (0.421) and the lowest were between O. a. polii and O.a. karelini (0.083) and between O. a. ammon and O. a. darwini (0.040) subspecies. Genetic diversity was higher in Central Asian argali as compared to East Asian populations. O. a. severtzovi had an admixed origin and consisted of two genetic components—73.5 ± 0.2% of O. a. polli and 26.5 ± 0.2% of urial (O. vignei). TreeMix analysis revealed a migration event from urial to O. a. severtzovi argali. The analysis of complete mitogenomes supported the results based on whole-genome genotyping. Considering that all the mtDNA sequences of O. a severtzovi belonged to O. ammon and not to O. vignei, we concluded that gene flow in this group was associated with urial males. As this is only the first work on intraspecific taxonomy and genetic diversity of argali based on genome-wide SNP genotyping and the analysis of complete mitogenomes, we suggest that more genetic studies are needed to clarify the status of Gobi and Tian Shan argali.

We investigated the controversial origin of domestic sheep (Ovis aries) using large samples of contemporary and ancient domestic individuals and their closest wild relatives: the Asiatic mouflon (Ovis gmelini), the urial (Ovis vignei) and the argali (Ovis ammon). A phylogeny based on mitochondrial DNA, including 213 new cytochrome‐b sequences of wild Ovism confirmed that O. gmelini is the maternal ancestor of sheep and precluded mtDNA contributions from O. vignei (and O. gmelini × O. vignei hybrids) to domestic lineages. We also produced 54 new control region sequences showing shared haplogroups (A, B, C and E) between domestic sheep and wild O. gmelini which localized the domestication center in eastern Anatolia and central Zagros, excluding regions further east where exclusively wild haplogroups were found. This overlaps with the geographic distribution of O. gmelini gmelini, further suggesting that the maternal origin of domestic sheep derives from this subspecies. Additionally, we produced 57 new CR sequences of Neolithic sheep remains from a large area covering Anatolia to Europe, showing the early presence of at least three mitochondrial haplogroups (A, B and D) in Western colonization routes. This confirmed that sheep domestication was a large‐scale process that captured diverse maternal lineages (haplogroups). [ABSTRACT FROM AUTHOR]

Haftad-Gholleh Area has recently encountered many changes. In this study, by using landsat images of the years 1996 and 2016, landuse maps were classified into four classes including: agriculture, rangeland, residential areas, and rocks. Land Change Modeler (LCM) and Habitat and Biodiversity Modeler (HBM) modules in the Idrisi GIS software were used to analyze the land use changes and habitat evaluation for the prediction of the land uses status in 2016, based on the Artificial Neural Network (ANN), Markov Chain analysis and logistic regression. The results showed that most of the changes in the landscape of the region between 1996 and 2016 were related, respectively, to attrition, aggregation and creation indicators; between the years 2016 to 2041, they can be related, respectively, to the creation and dissection indicators. The habitat evaluation showed that 4.5% of the habitat was decreased in 2016, as compared to 1996. With the continuation of this trend, 6.5% of the habitat will fall in 2041, as compared to 2016. Receiver Operating Characteridtic (ROC) of the model also specified that the desirability model validity was equal to 0.9558, showing the excellent performance of logistic regression method. In general, this can be an important principle approach preventing from changes in the habitat of wild sheep to other land uses.

Although extensive research has been conducted on a variety of factors that influence wildlife harvest rates, few studies have quantified the impact of weather on harvest success. As global warming continues to contribute to unprecedented changes in local weather regimes, particularly in arctic and alpine ecosystems, understanding how these changes impact human–wildlife interactions will become increasingly important and relevant for wildlife managers. Therefore, we used a long-term dataset (1999–2015) on Dall's sheep Ovis dalli dalli, an alpine species in Alaska, USA, as a case study to explore how changes in local daily weather has affected hunter harvest success. We used generalized linear mixed models to estimate relationships between daily harvest count and weather variables using three separate models; all hunters, resident hunters and non-resident hunters. Weather variables included daily mean relative humidity, precipitation, air temperature and wind speed. For our model including all hunters, which excluded wind, we estimated that a mean increase in relative humidity, precipitation and temperature from one day to the next resulted in an 11.7, 4.3 and 2.9% decrease in daily harvest, respectively. The effect of relative humidity influenced harvest count two to three times more than all other weather variables across models. This study contributes to a limited body of knowledge on quantifying the impact of weather on harvest success and about how changes in weather affect hunter and wildlife behavior. Advancing knowledge on how weather influences variation in harvest may facilitate effective strategies for adapting hunting regulations to meet harvest and population goals. [ABSTRACT FROM AUTHOR]

Global climate change poses a new challenge for species and can even push some species toward an extinction vortex. The most affected organisms are those with narrow tolerance to the climatic factors but many large mammals such as ungulates with a wider ecological niche are also being affected indirectly. Our research mainly used wild sheep in central Iran as a model species to explore how the suitable habitats will change under different climatic scenarios and to determine if current borders of protected areas will adequately protect habitat requirements. To create habitat models we used animal-vehicle collision points as an input for species presence data. We ran habitat models using MaxEnt modeling approach under different climatic scenarios of the past, present and future (under the climatic scenarios for minimum (RCP2.6) and maximum (RCP8.5) CO2 concentration trajectories). We tried to estimate the overlap and the width of the ecological niche using relevant metrics. In order to analyze the effectiveness of the protected areas, suitable maps were concerted to binary maps using True Skill Statistic (TSS) threshold and measured the similarity of the binary maps for each scenario using Kappa index. In order to assess the competence of the present protected areas boundary in covering the distribution of species, two different scenarios were employed, which are ensemble scenario 1: an ensemble of the binary maps of the species distribution in Mid-Holocene, present, and RCP2.6; and ensemble scenario 2: an ensemble of binary suitability maps in Mid-Holocene, present, and RCP8.5. Then, the borders of modeled habitats with the boundaries of 23 existing protected areas in two central provinces in Iran were compared. The predicted species distribution under scenario 1 (RCP2.6) was mostly similar to its current distribution (Kappa = 0.53) while the output model under scenario 2 (RCP8.5) indicated a decline in the species distribution range. Under the first ensemble scenario, current borders of the protected areas in Hamedan province showed better efficiency to cover the model species distribution range. Analyzing MaxEnt spatial models under the second climatic scenario suggested that protected areas in both Markazi and Hamedan provinces will not cover "high suitability" areas in the future. Modeling the efficiency of the current protected areas under predicted future climatic scenarios can help the related authorities to plan conservation activities more efficiently. [ABSTRACT FROM AUTHOR]

Haftad-Gholleh Area has recently encountered many changes. In this study, by using landsat images of the years 1996 and 2016, landuse maps were classified into four classes including: agriculture, rangeland, residential areas, and rocks. Land Change Modeler (LCM) and Habitat and Biodiversity Modeler (HBM) modules in the Idrisi GIS software were used to analyze the land use changes and habitat evaluation for the prediction of the land uses status in 2016, based on the Artificial Neural Network (ANN), Markov Chain analysis and logistic regression. The results showed that most of the changes in the landscape of the region between 1996 and 2016 were related, respectively, to attrition, aggregation and creation indicators; between the years 2016 to 2041, they can be related, respectively, to the creation and dissection indicators. The habitat evaluation showed that 4.5% of the habitat was decreased in 2016, as compared to 1996. With the continuation of this trend, 6.5% of the habitat will fall in 2041, as compared to 2016. Receiver Operating Characteridtic (ROC) of the model also specified that the desirability model validity was equal to 0.9558, showing the excellent performance of logistic regression method. In general, this can be an important principle approach preventing from changes in the habitat of wild sheep to other land uses. [ABSTRACT FROM AUTHOR]

Currently, the intraspecific taxonomy of snow sheep (Ovis nivicola) is controversial and needs to be specified using DNA molecular genetic markers. In our previous work using whole-genome single nucleotide polymorphism (SNP) analysis, we found that the population inhabiting Kharaulakh Ridge was genetically different from the other populations of Yakut subspecies to which it was usually referred. Here, our study was aimed at the clarification of taxonomic status of Kharaulakh snow sheep using mitochondrial cytochrome b gene. A total of 87 specimens from five different geographic locations of Yakut snow sheep as well as 20 specimens of other recognized subspecies were included in this study. We identified 19 haplotypes, two of which belonged to the population from Kharaulakh Ridge. Median-joining network and Bayesian tree analyses revealed that Kharaulakh population clustered separately from all the other Yakut snow sheep. The divergence time between Kharaulakh population and Yakut snow sheep was estimated as 0.48 ± 0.19 MYA. Thus, the study of the mtDNA cytb sequences confirmed the results of genome-wide SNP analysis. Taking into account the high degree of divergence of Kharaulakh snow sheep from other groups, identified by both nuclear and mitochondrial DNA markers, we propose to classify the Kharaulakh population as a separate subspecies.

This study employs the maximum entropy modelling technique to investigate the geographic distribution pattern of wild sheep (Ovis Orientalis) on Tangeh Sayyad Proteced Area. A set of eight environmental predictors is employed together with presence-only records of wild sheep. Two methods has been used to improve the performance of modeling: density-based occurrence thinning and performance-based predictor selection. Using the four different thresholds (Fixed cumulative value 10, 10 Percentile training presence, Minimum training presence, Equal training sensitivity and specificity), potential distribution of species was estimated. Results were evaluated using the threshold-dependent Statistics (Sensivity, Specifity, Kappa, TSS), a binomial test, Wilcoxon signed-rank test, and Area Under Curve (AUC). Relative variable importance was assessed using Maxent’s built-in Jacknife functionality. The results showed that the distributions fitted the provided occurrence data very well (at least AUCs = 0.77 for predictors with randomly selected spots and at most AUC=0.82 for random predictors with random sampling) and threshold-dependent Statistics results showed that prediction success for wild sheep were acceptable. Slope and distance to village were found to be the most important predictors. Generally, results showed that the model performance markedly improved by appropriate predictor selection and occurrence thinning.

In 2014–2016, >1,000 wild goats and sheep in 4 northern and central provinces of Iran died from peste des petits ruminants virus (PPRV) infection. Partial nucleoprotein sequencing of PPRV from 3 animals showed a close relationship to lineage 4 strains from China. Control measures are needed to preserve vulnerable ruminant populations.

Sperm cryopreservation protocols are not well defined in many wild species such as the mouflon. The aim was to study the effect of different concentrations of EY on mouflon epididymal sperm cryosurvival. Samples were collected by the flushing method and cryopreserved by the conventional freezing technique in straws using a TEST (TES, Tris, glucose) 5% v/v glycerol medium containing either 6% v/v (n=16) or 12% v/v (n=13) clarified EY. The membrane integrity, acrosome integrity, motility, and morphological abnormalities were assessed in fresh and frozen/thawed samples. Fresh sperm quality parameters did not differ between groups except for the acrosome integrity that was lower in the TEST-6% EY than in the TEST-12% EY group (88.9 ± 2.1% vs 94.7 ± 0.8%). Membrane integrity (31.6 ± 4.6% vs 11.6 ± 4.5%), total motility (32.8 ± 4.6% vs 17.2 ± 5.6%), progressive motility (13.3 ± 2.7% vs 6.1 ± 2.9) were higher in frozen-thawed sperm with TEST-6% EY than with TEST-12% EY (p

Wild sheep is belonging to Bovidae family and genus ovis which living in the most regions of Iran. There are many challenges between researchers about Wild Sheep species taxonomy. This study aims to investigate genetic and phylogenetic analysis of cytochrome b region of ovis orientalis's mtDNA in the Buruieh wildlife refuge in order to determine the correct taxonomy. With this regard, 17 samples of ovis orientalis stool and tissue were collected from Buruieh Wildlife Refuge in Khatam Township. After DNA extraction 1140, 741, 765 bp fragment of the mitochondrial cytochrome b was amplified with primers Cytb F-Cytb R, Cytb F- Cytbin R and Cytb R-Cytbin F under polymerase chain reaction .Amplified fragments were sequenced by ABI 3130 automated device with Sanger method. The results were compared with sequences from other studies to determine the genetic distances. Hoplotype variations were not observed in the nucleotide sequences obtained in this study. Using the Neighbor-Joining phylogenetic test results showed that the Buruieh Wildlife Refuge wild sheep is placed in the group of ovis orientalis and is different from other ovis orientalis populations all around Iran in the terms of Hoplotype. Our results demonstrated that the Buruieh Refuge Wildlife Sheeps have low genetic diversity which should be considered at the long-time managment activities in the future.

Although corridors have been the subject of extensive research in the recent years, the probable correlation between structural and functional corridors have not been addressed to date. To fill this scientific gap, we compared structural and functional corridors of wild sheep ( Ovis orientalis ) as a threatened species in a semi-arid area of central Iran. We first used Maximum-Entropy to develop wild sheep habitat suitability map. We then used Morphological-Spatial-Pattern-Analysis (MSPA) and circuit theory to map structural and functional corridors of wild sheep respectively. Bootstrapping techniques then were used to compare structural and functional corridors. We found that structural corridor is a concept which is dependent on the scale of observation. By changing edge-width from 600 to 1200 m, the total area of structural corridors increased by 63%. We also only found very small differences in the functional connectivity role of different MSPA categories (including structural corridors). All MSPA categories together accounted for only 20% of the functional connectivity. Although, in some cases functional corridors had a better performance in showing migration path of wild sheep between reserves, other cases showed that for effective conservation, both structural and functional corridors should be identified and considered in the planning step. [ABSTRACT FROM AUTHOR]

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Forty-one wild sheep (Ovis ammon orintalis) from Kabodan Island of National Park of UrmiaLake (North-West of Iran), were examined during a period of six months from October 2002 toMarch 2003, for helminthes and coccidian infection. The numbers of oocyst and eggs per gram offaeces (OPG & EPG) were determined by the centrifuge flotation technique using saturated sugarsolution. The rate of infection for Strongylid form, Marshalagia, Trichuris eggs, and lung wormlarvae were 8 (19.5%), 12 (29.5%), 17 (41.5%) and 14 (34.1%), respectively. Thirty-three(80.48%) of the examined wild animals were infected to one or more Eimeria species including E.parva, E. ahsata, E. ovinoidalis and E. faurei. This study suggested that the rate of parasiticinfection in wild sheep were very low but it would seem that in unsuitable condition such asdrought and starvation, parasitic infection can be cause a serious problem in wild sheep population.

Ladak hurial (Ovis vignei vignei) is a threatened wild sheep, vulnerable and listed in the Appendix 1 of Convention on International Trade in Endangered Species of Fauna and Flora, present in small pockets of northern Pakistan including Chitral district in Khyber Pakhtunkhwa, Gilgit-Baltistan (GB), and in Ladakh (Jammu and Kashmir) in India. Based on rapidly declining population due to various threats and restricted geographic range, these urial are considered Vulnerable globally as per IUCN Red List 2015.2 of threatened animals. The present study was designed to collect information on the current conservation status of these urial in Gilgit-Baltistan during January to September, 2013. Data were collected through direct observations, using trail walks and vantage points, as well as by collecting information from local residents, shepherds, and hunters using a questionnaire. A sum total of 172 individuals were recorded from four main localities (Bunji, Nanga Parbat, Nagar, and Skardu) comprising twenty four herds (mean size=7.17±3.19) with 1.91 animals/km² overall population density. Of these, 128 individuals could be classified as females (n=66; 38.37%) and males (n=62; 36.05%), while remaining 44 (25.58%) individuals including young ones (n=29) could not be sexually identified. Besides direct sighting minimum population (172 individuals), an overall estimated population comprising ca. 432 individuals (4.79 urial/km²) was also figured out based on local information as collected through questionnaires. The population of Ladakh urial has been declining during the last few decades due to illegal hunting and habitat degradation by increasing livestock population and extraction of wood, fodder and medicinal plants. Its distribution range has also been shrinking and they have been extirpated from at least six previously known localities during the last decade. To ensure the continuous survival of the existing urial population, a comprehensive research based integrated strategy is required. [ABSTRACT FROM AUTHOR]

The aim of the present study is to determine the characteristics of genotype and phenotype of Echinococcus granulosus derived from wild sheep and to compare them with the strains of E. granulosus sensu stricto (sheep-dog) and E. granulosus camel strain (camel-dog) in Iran. In Khojir National Park, near Tehran, Iran, a fertile hydatid cyst was recently found in the liver of a dead wild sheep (Ovis orientalis). The number of protoscolices (n=6,000) proved enough for an experimental infection in a dog. The characteristics of large and small hooks of metacestode were statistically determined as the sensu stricto strain but not the camel strain (P=0.5). To determine E. granulosus genotype, 20 adult worms of this type were collected from the infected dog. The second internal transcribed spacer (ITS2) of the nuclear ribosomal DNA (rDNA) and cytochrome c oxidase 1 subunit (COX1) of the mitochondrial DNA were amplified from individual adult worm by PCR. Subsequently, the PCR product was sequenced by Sanger method. The lengths of ITS2 and COX1 sequences were 378 and 857 bp, respectively, for all the sequenced samples. The amplified DNA sequences from both ribosomal and mitochondrial genes were highly similar (99% and 98%, respectively) to that of the ovine strain in the GenBank database. The results of the present study indicate that the morpho-molecular features and characteristics of E. granulosus in the Iranian wild sheep are the same as those of the sheep-dog E. granulosus sensu stricto strain. [ABSTRACT FROM AUTHOR]

The mouflon population of Cyprus (Ovis orientalis ophion) comprises historically preserved feral descendants of sheep domesticated during the Neolithic. We determined genetic identity of this taxon in order to elucidate its systematic placement and enforce its protection. We used 12 loci of microsatellite DNA to infer genetic relationships between the Cypriot mouflon and either long-time isolated (Corsica, Sardinia) or recently introduced (central Italy) European mouflons (O. o. musimon). We also sequenced the mitochondrial DNA (mtDNA) Cytochrome-b gene to infer the origin of the Cypriot mouflon including many National Centre for Biotechnology Information (NCBI) entries of European and Near Eastern conspecifics. Microsatellites disclosed net divergence between Western Mediterranean and Cypriot mouflon. The latter was included in the highly heterogeneous Near Eastern O. orientalis mtDNA group, Iran representing the most credited region as the source for its ancient introduction to Cyprus. Both international and national legislation protect the mouflon of Cyprus as a wild taxon (O. o. ophion). However, the IUCN Red List of Threatened Species and NCBI include the Cypriot mouflon as subspecies of its respective domestic species, the sheep (O. aries). Unfortunately, people charged with crime against protected mouflon may benefit from such taxonomic inconsistency between legislation and databases, as the latter can frustrate molecular DNA forensic outcomes. Until a definitive light can be shed on Near Eastern O. orientalis systematics, we suggest that the Cypriot mouflon should be unvaryingly referred to as O. o. ophion in order not to impair conservation in the country where it resides. [ABSTRACT FROM AUTHOR]

ABSTRACT European settlement led to extirpation of native Audubon's bighorn sheep (formerly Ovis canadensis auduboni) from North Dakota during the early 20th century. The North Dakota Game and Fish Department subsequently introduced California bighorn sheep (formerly O. c. californiana) that were indigenous to the Williams Lake region of British Columbia, Canada, and Rocky Mountain bighorn sheep ( O. c. canadensis) that were indigenous to the Sun River region of Montana. Although California bighorn sheep are no longer recognized as a distinct subspecies, they are smaller and adapted to a milder climate than either the native bighorn sheep of North Dakota or introduced bighorn sheep from Montana. Because reintroductions still play a key role in the management of bighorn sheep and because local adaptation may have substantial demographic consequences, we evaluated causes of variation in recruitment of bighorn sheep reintroduced in North Dakota. During 2006-2011, Montana stock recruited 0.54 juveniles/adult female ( n = 113), whereas British Columbia stock recruited 0.24 juveniles/adult female ( n = 562). Our most plausible mixed-effects logistic regression model (53% of model weight) attributed variation in recruitment to differences between source populations (odds ratio = 4.5; 90% CI = 1.5, 15.3). Greater recruitment of Montana stock (fitted mean = 0.56 juveniles/adult female; 90% CI = 0.41, 0.70) contributed to a net gain in abundance ( r = 0.15), whereas abundance of British Columbia stock declined (fitted mean = 0.24 juveniles/adult female; 90% CI = 0.09, 0.41; r = − 0.04). Translocations have been the primary tool used to augment and restore populations of wild sheep but often have failed to achieve objectives. Our results show that ecotypic differences among source stocks may have long-term implications for recruitment and demographic performance of reintroduced populations. Published 2014. This article is a U.S. Government work and is in the public domain in the USA. [ABSTRACT FROM AUTHOR]

Protozoa species were identified in rumen contents of four domestic sheep (Ovis aries) from South Africa. All animals were fed a forage diet which consisted of 50% lucerne and 50% teff hay. Ten new host records were identified, bringing the total number of species and forms observed in sheep in South Africa to 30. The occurrence and geographic distribution of ciliate protozoa in both domestic and wild sheep from around the world are summarised. It was found that 15 genera and 131 species occur in domestic sheep globally.