39 results on '"wild bird population"'
Search Results
2. Low but contrasting neutral genetic differentiation shaped by winter temperature in European great tits
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Blandine Doligez, Ben C. Sheldon, Eduardo J. Belda, Verena Saladin, Jan Komdeur, Marcel E. Visser, Frank Adriaensen, János Török, Camilla A. Hinde, Richard Ubels, Arnaud Grégoire, Charles Perrier, Erik Matthysen, Tapio Eeva, Joost M. Tinbergen, Emilio Barba, Raivo Mänd, Heinz Richner, Ana Cláudia Norte, Mariusz Cichoń, Natalia Pitala, Mélissa Lemoine, Tore Slagsvold, Anne Charmantier, Kees van Oers, Kay Lucek, Arild Johnsen, Universität Zürich [Zürich] = University of Zurich (UZH), Institute of Ecology and Evolution [Bern, Switzerland], University of Bern, University of Sheffield [Sheffield], Centre d’Ecologie Fonctionnelle et Evolutive (CEFE), Centre National de la Recherche Scientifique (CNRS)-Université de Montpellier (UM)-École pratique des hautes études (EPHE), Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Institut National de la Recherche Agronomique (INRA)-Université Paul-Valéry - Montpellier 3 (UPVM)-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut de Recherche pour le Développement (IRD [France-Sud]), University of Antwerp (UA), Evolutionary Ecology Group, Institut Cavanilles de Biodiversitat i Biologia Evolutiva (ICBiBE), Universitat de València (UV), Instituto de Investigación para la Gestión Integrada de Zonas Costeras [Universitat Politècnica de València] (IGIC), Universitat Politècnica de València (UPV), Uniwersytet Jagielloński w Krakowie = Jagiellonian University (UJ), Institute of Environmental Sciences, University of Turku, Department of Animal Sciences [Wageningen], Wageningen University and Research [Wageningen] (WUR), Behavioural Ecology Group, Natural History Museum [Oslo], University of Oslo (UiO), Centre for Ecological and Evolutionary studies [Groningen], University of Groningen [Groningen], Institute of Ecology and Earth Sciences [Tartu], University of Tartu, Marine and Environmental Sciences Centre (MARE UC), Universidade de Coimbra [Coimbra], Department of Biological and Environmental Science [Jyväskylä Univ] (JYU), University of Jyväskylä (JYU), University of Oxford [Oxford], Edward Grey Institute of Field Ornithology, Centre for Ecological and Evolutionary Synthesis (CEES), Department of Biosciences [Oslo], Faculty of Mathematics and Natural Sciences [Oslo], University of Oslo (UiO)-University of Oslo (UiO)-Faculty of Mathematics and Natural Sciences [Oslo], University of Oslo (UiO)-University of Oslo (UiO), Animal Ecology Group, Centre for Ecological and Evolutionary Studies (CEES), Eötvös Loránd University (ELTE), Netherlands Institute of Ecology (NIOO-KNAW), Université Claude Bernard Lyon 1 (UCBL), Université de Lyon, Evolutionary Biology Centre (EBC), Uppsala University, Department of Ecology and Genetics, Animal Ecology, The study was funded by the Swiss National Science Foundation (3100A0-102017 to HR, P2BEP3_152103 to KL and PMPDP3_151361/161858 to ML). All samples were collected under licenses of national authorities and financially supported by the Academy of Finland grant (to NP and 265859 to TE), the Netherland Organisation for Scientific Research (NWO-VICI 86503003 to JK and NWO-VICI to MV), the Netherlands Genomics Initiative (Horizon grant to KvO), the Hungarian Scientific Research Fund (OTKA 75618 to JT), the Estonian Ministry of Education and Science (IUT 34-8 to RM), the OSU-OREME, the Spanish Ministry of Education and Science (CGL2010-21933-CO-02 to EB), the Portuguese Foundation for Science and Technology (SFRH/BD/13594/2003 to ACN) and the Agence Nationale de la Recherche (ANR-08-JCJC-0041-01 to BD)., ANR-08-JCJC-0041,EPICE,Evolutionary Potential In Changing Environments - a quantitative genetic approach(2008), Evolution, adaptation et comportement, Département écologie évolutive [LBBE], Laboratoire de Biométrie et Biologie Evolutive - UMR 5558 (LBBE), Université de Lyon-Université de Lyon-Institut National de Recherche en Informatique et en Automatique (Inria)-VetAgro Sup - Institut national d'enseignement supérieur et de recherche en alimentation, santé animale, sciences agronomiques et de l'environnement (VAS)-Centre National de la Recherche Scientifique (CNRS)-Université Claude Bernard Lyon 1 (UCBL), Université de Lyon-Université de Lyon-Institut National de Recherche en Informatique et en Automatique (Inria)-VetAgro Sup - Institut national d'enseignement supérieur et de recherche en alimentation, santé animale, sciences agronomiques et de l'environnement (VAS)-Centre National de la Recherche Scientifique (CNRS)-Laboratoire de Biométrie et Biologie Evolutive - UMR 5558 (LBBE), Université de Lyon-Université de Lyon-Institut National de Recherche en Informatique et en Automatique (Inria)-VetAgro Sup - Institut national d'enseignement supérieur et de recherche en alimentation, santé animale, sciences agronomiques et de l'environnement (VAS)-Centre National de la Recherche Scientifique (CNRS), Komdeur lab, Both group, Conservation Ecology Group, and Animal Ecology (AnE)
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0106 biological sciences ,0301 basic medicine ,SELECTION ,ZOOLOGIA ,[SDV]Life Sciences [q-bio] ,FLOW ,SOFTWARE ,01 natural sciences ,microsatellites ,Behavioral Ecology ,LOCAL ADAPTATION ,Parus major ,ComputingMilieux_MISCELLANEOUS ,education.field_of_study ,Latitude ,CLIMATE-CHANGE ,Ecology ,Isolation-by-distance ,latitude ,PE&RC ,Gedragsecologie ,WILD BIRD POPULATION ,international ,Genetic structure ,Gene pool ,winter severity ,Population ,Animal Breeding and Genomics ,Biology ,PARUS-MAJOR ,010603 evolutionary biology ,03 medical and health sciences ,Population genetic structure ,Fokkerij en Genomica ,Microsatellites ,education ,Ecology, Evolution, Behavior and Systematics ,Local adaptation ,Isolation by distance ,isolation-by-distance ,[SDV.GEN]Life Sciences [q-bio]/Genetics ,Genetic diversity ,F-statistics ,Genetic divergence ,Winter severity ,030104 developmental biology ,PARTIAL MIGRATION ,NATAL DISPERSAL ,RE-IMPLEMENTATION ,WIAS ,570 Life sciences ,biology ,ta1181 - Abstract
Gene flow is usually thought to reduce genetic divergence and impede local adaptation by homogenising gene pools between populations. However, evidence for local adaptation and phenotypic differentiation in highly mobile species, experiencing high levels of gene flow, is emerging. Assessing population genetic structure at different spatial scales is thus a crucial step towards understanding mechanisms underlying intraspecific differentiation and diversification. Here, we studied the population genetic structure of a highly mobile species - the great tit Parus major - at different spatial scales. We analysed 884 individuals from 30 sites across Europe including 10 close-by sites (< 50 km), using 22 microsatellite markers. Overall we found a low but significant genetic differentiation among sites (F-ST = 0.008). Genetic differentiation was higher, and genetic diversity lower, in south-western Europe. These regional differences were statistically best explained by winter temperature. Overall, our results suggest that great tits form a single patchy metapopulation across Europe, in which genetic differentiation is independent of geographical distance and gene flow may be regulated by environmental factors via movements related to winter severity. This might have important implications for the evolutionary trajectories of sub-populations, especially in the context of climate change, and calls for future investigations of local differences in costs and benefits of philopatry at large scales. (C) 2016 The Linnean Society of London, The study was funded by the Swiss National Science Foundation (3100A0-102017 to HR, P2BEP3_152103 to KL and PMPDP3_151361/161858 to ML). We thank L. Gustafsson and J. Forsman who kindly allowed us to use their nest boxes. We gratefully thank E. Bezault, L. Cornetti and two anonymous reviewers for valuable advice on genetic analyses and helpful comments on the manuscript. All samples were collected under licenses of national authorities and financially supported by the Academy of Finland grant (to NP and 265859 to TE), the Netherland Organisation for Scientific Research (NWO-VICI 86503003 to JK and NWO-VICI to MV), the Netherlands Genomics Initiative (Horizon grant to KvO), the Hungarian Scientific Research Fund (OTKA 75618 to JT), the Estonian Ministry of Education and Science (IUT 34-8 to RM), the OSU-OREME, the Spanish Ministry of Education and Science (CGL2010-21933-CO-02 to EB), the Portuguese Foundation for Science and Technology (SFRH/BD/13594/2003 to ACN) and the Agence Nationale de la Recherche (ANR-08-JCJC-0041-01 to BD).
- Published
- 2016
3. The heuristic value of redundancy models of aging
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Jelle J. Boonekamp, Simon Verhulst, Michael Briga, and Verhulst lab
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Senescence ,Aging ,Evolution ,Actuarial senescence ,Dietary restriction ,Gompertz function ,Model parameters ,Biology ,Models, Biological ,Biochemistry ,Endocrinology ,Genetics ,Econometrics ,Redundancy (engineering) ,Animals ,Heuristics ,LONGEVITY ,Life Style ,Molecular Biology ,METAANALYSIS ,Caloric Restriction ,Demography ,AGE-SPECIFIC MORTALITY ,Heuristic ,Age specific mortality ,Temperature ,Disposable soma ,Cell Biology ,Aging interventions ,WILD BIRD POPULATION ,REPRODUCTION ,SENESCENCE ,SURVIVAL ,Drosophila ,Food Deprivation ,Value (mathematics) - Abstract
Molecular studies of aging aim to unravel the cause(s) of aging bottom-up, but linking these mechanisms to organismal level processes remains a challenge. We propose that complementary top-down data-directed modelling of organismal level empirical findings may contribute to developing these links. To this end, we explore the heuristic value of redundancy models of aging to develop a deeper insight into the mechanisms causing variation in senescence and lifespan. We start by showing (i) how different redundancy model parameters affect projected aging and mortality, and (ii) how variation in redundancy model parameters relates to variation in parameters of the Gompertz equation. Lifestyle changes or medical interventions during life can modify mortality rate, and we investigate (iii) how interventions that change specific redundancy parameters within the model affect subsequent mortality and actuarial senescence. Lastly, as an example of data-directed modelling and the insights that can be gained from this, (iv) we fit a redundancy model to mortality patterns observed by Mair et al. (2003; Science 301: 1731-1733) in Drosophila that were subjected to dietary restriction and temperature manipulations. Mair et al. found that dietary restriction instantaneously reduced mortality rate without affecting aging, while temperature manipulations had more transient effects on mortality rate and did affect aging. We show that after adjusting model parameters the redundancy model describes both effects well, and a comparison of the parameter values yields a deeper insight in the mechanisms causing these contrasting effects. We see replacement of the redundancy model parameters by more detailed sub-models of these parameters as a next step in linking demographic patterns to underlying molecular mechanisms. (C) 2015 Elsevier Inc. All rights reserved.
- Published
- 2015
4. The certainty of uncertainty: Potential sources of bias and imprecision in disease ecology studies
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Shelly Lachish, Kris A. Murray, and Medical Research Council (MRC)
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0106 biological sciences ,0301 basic medicine ,disease impacts ,state misclassification ,wildlife disease ,Computer science ,media_common.quotation_subject ,Ecology (disciplines) ,prevalence ,specificity ,Force of infection ,imperfect detection ,AMPHIBIAN PATHOGEN ,Disease ,Review ,Wildlife disease ,WEST-NILE-VIRUS ,DETECTION PROBABILITY ,010603 evolutionary biology ,01 natural sciences ,03 medical and health sciences ,Complete information ,Econometrics ,Veterinary Sciences ,INFECTIOUS-DISEASES ,PARASITE ,media_common ,Science & Technology ,lcsh:Veterinary medicine ,General Veterinary ,Scale (chemistry) ,Sampling (statistics) ,host-pathogen ,sensitivity ,ENDEMIC MALARIA ,WILD BIRD POPULATION ,030104 developmental biology ,13. Climate action ,lcsh:SF600-1100 ,Veterinary Science ,Psychological resilience ,SOCIAL NETWORKS ,Life Sciences & Biomedicine - Abstract
Wildlife diseases have important implications for wildlife and human health, the preservation of biodiversity and the resilience of ecosystems. However, understanding disease dynamics and the impacts of pathogens in wild populations is challenging because these complex systems can rarely, if ever, be observed without error. Uncertainty in disease ecology studies is commonly defined in terms of either heterogeneity in detectability (due to variation in the probability of encountering, capturing, or detecting individuals in their natural habitat) or uncertainty in disease state assignment (due to misclassification errors or incomplete information). In reality, however, uncertainty in disease ecology studies extends beyond these components of observation error and can arise from multiple varied processes, each of which can lead to bias and a lack of precision in parameter estimates. Here, we present an inventory of the sources of potential uncertainty in studies that attempt to quantify disease-relevant parameters from wild populations (e.g. prevalence, incidence, transmission rates, force of infection, risk of infection, persistence times, and disease-induced impacts). We show that uncertainty can arise via processes pertaining to aspects of the disease system, the study design, the methods used to study the system, and the state of knowledge of the system, and that uncertainties generated via one process can propagate through to others because of interactions between the numerous biological, methodological and environmental factors at play. We show that many of these sources of uncertainty may not be immediately apparent to researchers (for example, unidentified crypticity among vectors, hosts or pathogens, a mismatch between the temporal scale of sampling and disease dynamics, demographic or social misclassification), and thus have received comparatively little consideration in the literature to date. Finally, we discuss the type of bias or imprecision introduced by these varied sources of uncertainty and briefly present appropriate sampling and analytical methods to account for, or minimise, their influence on estimates of disease- relevant parameters. This review should assist researchers and practitioners to navigate the pitfalls of uncertainty in wildlife disease ecology studies.
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- 2018
5. Timing as a sexually selected trait
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circadian rhythm ,PHOTOPERIODIC TIME MEASUREMENT ,SUPERB FAIRY-WRENS ,DEEP BRAIN PHOTORECEPTOR ,timing of reproduction ,ARCTIC GROUND-SQUIRRELS ,EXTRARETINAL LIGHT PERCEPTION ,display behaviour ,AVIAN CIRCADIAN SYSTEM ,DAILY ACTIVITY PATTERNS ,WILD BIRD POPULATION ,CLOCK GENE POLYMORPHISM ,WRENS MALURUS-CYANEUS ,sexual selection ,circannual rhythm - Abstract
Sexual selection favours the expression of traits in one sex that attract members of the opposite sex for mating. The nature of sexually selected traits such as vocalization, colour and ornamentation, their fitness benefits as well as their costs have received ample attention in field and laboratory studies. However, sexually selected traits may not always be expressed: coloration and ornaments often follow a seasonal pattern and behaviours may be displayed only at specific times of the day. Despite the widely recognized differences in the daily and seasonal timing of traits and their consequences for reproductive success, the actions of sexual selection on the temporal organization of traits has received only scant attention. Drawing on selected examples from bird and mammal studies, here we summarize the current evidence for the daily and seasonal timing of traits. We highlight that molecular advances in chronobiology have opened exciting new opportunities for identifying the genetic targets that sexual selection may act on to shape the timing of trait expression. Furthermore, known genetic links between daily and seasonal timing mechanisms lead to the hypothesis that selection on one timescale may simultaneously also affect the other. We emphasize that studies on the timing of sexual displays of both males and females from wild populations will be invaluable for understanding the nature of sexual selection and its potential to act on differences within and between the sexes in timing. Molecular approaches will be important for pinpointing genetic components of biological rhythms that are targeted by sexual selection, and to clarify whether these represent core or peripheral components of endogenous clocks. Finally, we call for a renewed integration of the fields of evolution, behavioural ecology and chronobiology to tackle the exciting question of how sexual selection contributes to the evolution of biological clocks.This article is part of the themed issue 'Wild clocks: integrating chronobiology and ecology to understand timekeeping in free-living animals'.
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- 2017
6. Interplay of robustness and plasticity of life history traits in habitats with different thermal regimes
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wild bird population ,drosophila-melanogaster ,orchesella-cincta collembola ,environmental canalization ,evolution ,reaction norms ,soil arthropod ,Plantenecologie en Natuurbeheer ,Plant Ecology and Nature Conservation ,genetic-structure ,indeterminate growth ,PE&RC ,phenotypic plasticity - Abstract
Phenotypic plasticity describes the ability of an individual to alter its phenotype in response to the environment and is potentially adaptive when dealing with environmental variation. However, robustness in the face of a changing environment may often be beneficial for traits that are tightly linked to fitness. We hypothesized that robustness of some traits may depend on specific patterns of plasticity within and among other traits. We used a reaction norm approach to study robustness and phenotypic plasticity of three life-history traits of the collembolan Orchesella cincta in environments with different thermal regimes. We measured adult mass, age at maturity and growth rate of males and females from heath and forest habitats at two temperatures (12 and 22 °C). We found evidence for ecotype-specific robustness of female adult mass to temperature, with a higher level of robustness in the heath ecotype. This robustness is facilitated by plastic adjustments of growth rate and age at maturity. Furthermore, female fecundity is strongly influenced by female adult mass, explaining the importance of realizing a high mass across temperatures for females. These findings indicate that different predicted outcomes of life-history theory can be combined within one species' ontogeny and that models describing life-history strategies should not assume that traits like growth rate are maximized under all conditions. On a methodological note, we report a systematic inflation of variation when standard deviations and correlation coefficients are calculated from family means as opposed to individual data within a family structure.
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- 2015
7. Behavioural synchronization of large-scale animal movements - disperse alone, but migrate together?
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Cote, Julien, Bocedi, Greta, Debeffe, Lucie, Chudzinska, Magda E., Weigang, Helene C., Dytham, Calvin, Gonzalez, Georges, Matthysen, Erik, Travis, Justin, Baguette, Michel, and Hewison, A. J. Mark
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seasonal migration ,coordinated movement ,LONG-DISTANCE MIGRATION ,schooling ,transience ,SPATIALLY STRUCTURED POPULATIONS ,budding ,coalition ,WHALES MEGAPTERA-NOVAEANGLIAE ,sociability ,WILD BIRD POPULATION ,MALE PARALLEL DISPERSAL ,BREEDING HABITAT SELECTION ,WHITE-FACED CAPUCHINS ,OWL AEGOLIUS-FUNEREUS ,INFLUENCE NATAL DISPERSAL ,dispersal ,social grouping ,parallel dispersal ,PERSONALITY-DEPENDENT DISPERSAL - Abstract
Dispersal and migration are superficially similar large-scale movements, but which appear to differ in terms of inter-individual behavioural synchronization. Seasonal migration is a striking example of coordinated behaviour, enabling animal populations to track spatio-temporal variation in ecological conditions. By contrast, for dispersal, while social context may influence an individual's emigration and settlement decisions, transience is believed to be mostly a solitary behaviour. Here, we review differences in drivers that may explain why migration appears to be more synchronized than dispersal. We derive the prediction that the contrast in the importance of behavioural synchronization between dispersal and migration is linked to differences in the selection pressures that drive their respective evolution. Although documented examples of collective dispersal are rare, this behaviour may be more common than currently believed, with important consequences for eco-evolutionary dynamics. Crucially, to date, there is little available theory for predicting when we should expect collective dispersal to evolve, and we also lack empirical data to test predictions across species. By reviewing the state of the art in research on migration and collective movements, we identify how we can harness these advances, both in terms of theory and data collection, to broaden our understanding of synchronized dispersal and its importance in the context of global change.
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- 2017
8. Avian malaria is associated with increased reproductive investment in the blue tit
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Lars Gustafsson, Aneta Arct, Mariusz Cichoń, Edyta Podmokła, Anna Dubiec, and Szymon M. Drobniak
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wild bird population ,Avian clutch size ,lineages ,Offspring ,prevalence ,selection ,Zoology ,Cyanistes caeruleus ,Avian malaria ,biology.animal ,medicine ,infections ,success ,Ecology, Evolution, Behavior and Systematics ,biology ,Reproductive success ,Cyanistes ,medicine.disease ,biology.organism_classification ,Passerine ,Brood ,Hawaii amakihi ,blood parasites ,plasmodium ,Animal Science and Zoology ,Malaria - Abstract
Haemosporidians causing avian malaria are very common parasites among bird species. Their negative effects have been repeatedly reported in terms of deterioration in survival prospects or reproductive success. However, a positive association between blood parasites and avian fitness has also been reported. Here, we studied a relationship between presence of malaria parasites and reproductive performance of the host, a hole-breeding passerine – the blue tit Cyanistes caeruleus. Since the malaria parasites might affect their hosts differently depending on environmental conditions, we performed brood size manipulation experiment to differentiate parental reproductive effort and study the potential interaction between infection status and brood rearing conditions on reproductive performance. We found individuals infected with malaria parasites to breed later in the season in comparison with uninfected birds, but no differences were detected in clutch size. Interestingly, infected parents produced heavier and larger offspring with stronger reaction to phytohemagglutinin. More importantly, we found a significant interaction between infection status and brood size manipulation in offspring tarsus length and reaction to phytohemagglutinin: presence of parasites had stronger positive effect among birds caring for experimentally enlarged broods. Our results might be interpreted either in the light of the parasite-mediated selection or terminal investment hypothesis.
- Published
- 2014
9. Replicated high-density genetic maps of two great tit populations reveal fine-scale genomic departures from sex-equal recombination rates
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N E M van Bers, Richard P. M. A. Crooijmans, K. van Oers, Marcel E. Visser, Ben C. Sheldon, Martien A. M. Groenen, Anna W. Santure, Jon Slate, I. De Cauwer, Animal Ecology (AnE), Department of Animal Ecology, Institute of Ecology (NIOO-KNAW), University of Sheffield [Sheffield], Laboratoire de Génétique et Evolution des Populations Végétales, Université de Lille, Sciences et Technologies-Centre National de la Recherche Scientifique (CNRS), Animal Breeding and Genomics Centre, Wageningen University and Research [Wageningen] (WUR), Edward Grey Institute, Department of Zoology, University of Oxford [Oxford], Department of Health Sciences, VU University Amsterdam-VU medisch centrum, Beersma lab, and Vrije universiteit = Free university of Amsterdam [Amsterdam] (VU)-VU medisch centrum
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Male ,0106 biological sciences ,Genetic Linkage ,01 natural sciences ,Genome ,ZEBRA FINCH ,Passeriformes ,parus-major ,chromosomal rearrangements ,Genetics (clinical) ,Netherlands ,Recombination, Genetic ,Genetics ,0303 health sciences ,education.field_of_study ,biology ,Chromosome Mapping ,Lizards ,Passerine ,WILD BIRD POPULATION ,heterochiasmy ,FICEDULA-ALBICOLLIS ,international ,CHICKEN ,Original Article ,Female ,PERSONALITY-TRAITS ,wild bird population ,ficedula-albicollis ,chicken ,Population ,Animal Breeding and Genomics ,Quantitative trait locus ,PARUS-MAJOR ,Polymorphism, Single Nucleotide ,010603 evolutionary biology ,Anolis ,03 medical and health sciences ,turkey genome ,biology.animal ,evolution ,SYNTENY CONSERVATION ,Animals ,TURKEY GENOME ,Fokkerij en Genomica ,education ,passerine ,Zebra finch ,030304 developmental biology ,Parus ,[SDV.GEN.GPO]Life Sciences [q-bio]/Genetics/Populations and Evolution [q-bio.PE] ,personality-traits ,zebra finch ,biology.organism_classification ,linkage map ,United Kingdom ,EVOLUTION ,Genetics, Population ,Evolutionary biology ,synteny conservation ,WIAS ,Finches ,Chickens ,population comparison ,Taeniopygia - Abstract
International audience; Linking variation in quantitative traits to variation in the genome is an important, but challenging task in the study of life-history evolution. Linkage maps provide a valuable tool for the unravelling of such trait Àgene associations. Moreover, they give insight into recombination landscapes and between-species karyotype evolution. Here we used genotype data, generated from a 10k single-nucleotide polymorphism (SNP) chip, of over 2000 individuals to produce high-density linkage maps of the great tit (Parus major), a passerine bird that serves as a model species for ecological and evolutionary questions. We created independent maps from two distinct populations: a captive F2-cross from The Netherlands (NL) and a wild population from the United Kingdom (UK). The two maps contained 6554 SNPs in 32 linkage groups, spanning 2010 cM and 1917 cM for the NL and UK populations, respectively, and were similar in size and marker order. Subtle levels of heterochiasmy within and between chromosomes were remarkably consistent between the populations, suggesting that the local departures from sex-equal recombination rates have evolved. This key and surprising result would have been impossible to detect if only one population was mapped. A comparison with zebra finch Taeniopygia guttata, chicken Gallus gallus and the green anole lizard Anolis carolinensis genomes provided further insight into the evolution of avian karyotypes.
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- 2013
10. Evolutionary signals of selection on cognition from the great tit genome and methylome
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Laine, Veronika N., Goßmann, Toni, Schachtschneider, Kyle M., Garroway, Colin J., Madsen, Ole, Verhoeven, Koen J. F., de Jager, Victor, Megens, Hendrik-Jan, Warren, Wesley C., Minx, Patrick, Crooijmans, Richard P. M. A., Corcoran, Pádraic, Sheldon, Ben C., Slate, Jon, Zeng, Kai, van Oers, Kees, Visser, Marcel E., Groenen, Martien A. M., Animal Ecology (AnE), Terrestrial Ecology (TE), and Beersma lab
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Male ,History ,ZOOLOGIA ,Generation ,Phenotypic plasticity ,Article ,Epigenesis, Genetic ,Cognition ,Life ,Memory ,Parus major ,Animals ,Humans ,Passeriformes ,Sequencing data ,Clutch size ,Alignment ,Neurons ,Genome ,Behavior, Animal ,Brain ,Wild bird population ,DNA Methylation ,Biological Evolution ,Phenotype ,international ,Models, Animal - Abstract
[EN] For over 50 years, the great tit (Parus major) has been a model species for research in evolutionary, ecological and behavioural research; in particular, learning and cognition have been intensively studied. Here, to provide further insight into the molecular mechanisms behind these important traits, we de novo assemble a great tit reference genome and whole-genome re-sequence another 29 individuals from across Europe. We show an overrepresentation of genes related to neuronal functions, learning and cognition in regions under positive selection, as well as increased CpG methylation in these regions. In addition, great tit neuronal non-CpG methylation patterns are very similar to those observed in mammals, suggesting a universal role in neuronal epigenetic regulation which can affect learning-, memory-and experience-induced plasticity. The high-quality great tit genome assembly will play an instrumental role in furthering the integration of ecological, evolutionary, behavioural and genomic approaches in this model species., We thank Eveline Verhulst for help with the methylome data, Christa Mateman for lab assistance, Martijn Derks for calculating the sliding windows, Tieshan Xu for the help with the Trinity assembly, Louise Dittmar for the help in dN/dS and diversity analysis, Christian Huber for help on the sweep analysis and Jun-Mo Kim who designed the SNP chip. K.M.S. was supported by a grant from the Cooperative Research Program for Agriculture Science & Technology Development (PJ009103) of the Rural Development Administration, Republic of Korea. T.I.G., P.C. and K.Z. were supported by a BBSRC grant (BB/K000209/1) and a NERC grant (NE/L005328/1) awarded to K.Z., C.J.G. was funded by Natural Environment Research Council (NERC) (NE/K01126X/1). K.J.F.V. was funded by the Dutch Organisation for Scientific Research, NWO VIDI grant (864.10.008). B.C.S. was funded by ERC Advanced Grant (250164) and by a Wolfson Merit Award from the Royal Society. J.S. was funded by a European Research Council (ERC) Starting grant, Avian EGG (202487) and a Natural Environment Research Council (NERC), The Great Tit HapMap Project (NE/J012599/1). M.E.V. was supported by the Netherlands Organisation for Scientific Research (NWO-VICI grant) and the European Research Council (ERC-2013-AdG 339092).
- Published
- 2016
11. Climate change, breeding date and nestling diet
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FOOD AVAILABILITY ,demography ,food web ,fungi ,passerines ,FICEDULA-HYPOLEUCA ,Ficedula hypoleuca ,glmmPQL ,foraging ,PHENOLOGICAL RESPONSE ,WILD BIRD POPULATION ,GEOGRAPHICAL VARIATION ,PHENOTYPIC PLASTICITY ,REPRODUCTIVE SUCCESS ,TITS PARUS-MAJOR ,GREAT TITS ,PROVISIONING BEHAVIOR - Abstract
1. Climate warming has led to shifts in the seasonal timing of species. These shifts can differ across trophic levels, and as a result, predator phenology can get out of synchrony with prey phenology. This can have major consequences for predators such as population declines owing to low reproductive success. However, such trophic interactions are likely to differ between habitats, resulting in differential susceptibility of populations to increases in spring temperatures. A mismatch between breeding phenology and food abundance might be mitigated by dietary changes, but few studies have investigated this phenomenon. Here, we present data on nestling diets of nine different populations of pied flycatchers Ficedula hypoleuca, across their breeding range. This species has been shown to adjust its breeding phenology to local climate change, but sometimes insufficiently relative to the phenology of their presumed major prey: Lepidoptera larvae. In spring, such larvae have a pronounced peak in oak habitats, but to a much lesser extent in coniferous and other deciduous habitats. 2. We found strong seasonal declines in the proportions of caterpillars in the diet only for oak habitats, and not for the other forest types. The seasonal decline in oak habitats was most strongly observed in warmer years, indicating that potential mismatches were stronger in warmer years. However, in coniferous and other habitats, no such effect of spring temperature was found. 3. Chicks reached somewhat higher weights in broods provided with higher proportions of caterpillars, supporting the notion that caterpillars are an important food source and that the temporal match with the caterpillar peak may represent an important component of reproductive success. 4. We suggest that pied flycatchers breeding in oak habitats have greater need to adjust timing of breeding to rising spring temperatures, because of the strong seasonality in their food. Such between-habitat differences can have important consequences for population dynamics and should be taken into account in studies on phenotypic plasticity and adaptation to climate change.
- Published
- 2012
12. Social environment affects juvenile dispersal in great tits (Parus major)
- Subjects
BROOD SIZE ,intraspecific competition ,prospecting ,Habitat selection ,social information ,WILD BIRD POPULATION ,natal dispersal ,SEX-SPECIFIC DISPERSAL ,Parus major ,BREEDING HABITAT SELECTION ,CONSPECIFIC ATTRACTION ,REPRODUCTIVE SUCCESS ,GATHERING PUBLIC INFORMATION ,public information ,BLUE TITS ,SETTLEMENT DECISIONS ,informed dispersal - Abstract
1. Habitat selection can affect individual fitness, and therefore, individuals are expected to assess habitat quality of potential breeding sites before settlement. 2. We investigated the role of social environment on juvenile dispersal behaviour in the great tit (Parus major). Two main contradictory hypotheses can be formulated regarding social effects on juvenile dispersal as follows: (i) High fledgling density and sex ratio may enhance the intensity of local (kin) competition and, therefore, reduce individual survival chance, enhance emigration and reduce settlement (repulsion hypothesis) (ii) Alternatively, high fledgling density and sex ratio may signal high-quality habitat or lead to aggregation and thus increase individual survival chance, reduce emigration and enhance settlement (attraction hypothesis). 3. To disentangle positive from negative effects of high density and male-biased sex ratio on dispersal, we manipulated the social composition of the fledgling population in 12 semi-isolated nest-box areas (plots) via a change of fledgling density (low/high) as well as fledgling sex ratio (female-biased/balanced/male-biased) across 3 years. We then tested whether experimental variation in male and female fledgling densities affected variation in local survival, emigration and settlement of juveniles, and whether social effects on survival and dispersal support the repulsion or attraction hypothesis. 4. We found no experimental effects on local survival and emigration probabilities. However, consistent with the attraction hypothesis, settlement was significantly and positively affected by local experimental sex ratio in each of the study years: both male and female juveniles avoided female-biased plots and settled more in plots that were balanced and male-biased the previous year. 5. Our study provides unprecedented experimental evidence that local sex ratio plays a causal role in habitat selection. We suggest that settlers avoid female-biased plots because a high proportion of females may reflect the absence or the low quality of local resources in the habitat. Alternatively, male territory acquisition may be facilitated by a high local density of candidate males, and therefore, juveniles were less successful in settling in female-biased plots.
- Published
- 2012
13. Quantitative genetics of behavioural reaction norms
- Subjects
TEMPERAMENT ,FITNESS CONSEQUENCES ,genotype by environment interaction ,heritability ,ECOLOGY ,INDIVIDUAL-DIFFERENCES ,EVOLUTION ,WILD BIRD POPULATION ,PHENOTYPIC PLASTICITY ,GASTEROSTEUS-ACULEATUS ,phenotypic gambit ,TIT PARUS-MAJOR ,predation ,genetic variation in plasticity ,adaptive population differentiation ,3-SPINED STICKLEBACK - Abstract
Behavioural ecologists have proposed various evolutionary mechanisms as to why different personality types coexist. Our ability to understand the evolutionary trajectories of personality traits requires insights from the quantitative genetics of behavioural reaction norms. We assayed > 1000 pedigreed stickleback for initial exploration behaviour of a novel environment, and subsequent changes in exploration over a few hours, representing their capacity to adjust their behaviour to changes in perceived novelty and risk. We found heritable variation in both the average level of exploration and behavioural plasticity, and population differences in the sign of the genetic correlation between these two reaction norm components. The phenotypic correlation was not a good indicator of the genetic correlation, implying that quantitative genetics are necessary to appropriately evaluate evolutionary hypotheses in cases such as these. Our findings therefore have important implications for future studies concerning the evolution of personality and plasticity.
- Published
- 2012
14. Variation in personality and behavioural plasticity across four populations of the great tit Parus major
- Subjects
CONSISTENT INDIVIDUAL-DIFFERENCES ,AVIAN PERSONALITIES ,REACTION NORMS ,temperament ,habituation ,VARIABLE ENVIRONMENT ,ECOLOGY ,WILD BIRD POPULATION ,REALIZED HERITABILITY ,personality ,EXPLORATORY-BEHAVIOR ,PHENOTYPIC PLASTICITY ,individual by environment interaction ,EVOLUTIONARY ,behavioural reaction norm ,local adaptation - Abstract
1. Interest in the evolutionary origin and maintenance of individual behavioural variation and behavioural plasticity has increased in recent years. 2. Consistent individual behavioural differences imply limited behavioural plasticity, but the proximate causes and wider consequences of this potential constraint remain poorly understood. To date, few attempts have been made to explore whether individual variation in behavioural plasticity exists, either within or between populations. 3. We assayed ` exploration behaviour' among wild-caught individual great tits Parus major when exposed to a novel environment room in four populations across Europe. We quantified levels of individual variation within and between populations in average behaviour, and in behavioural plasticity with respect to (i) repeated exposure to the room (test sequence), (ii) the time of year in which the assays were conducted and (iii) the interval between successive tests, all of which indicate habituation to novelty and are therefore of functional significance. 4. Consistent individual differences ('I') in behaviour were present in all populations; repeatability (range: 0.34-0.42) did not vary between populations. Exploration behaviour was also plastic, increasing with test sequence - but less so when the interval between subsequent tests was relatively large - and time of year; populations differed in the magnitude of plasticity with respect to time of year and test interval. Finally, the between-individual variance in exploration behaviour increased significantly from first to repeat tests in all populations. Individuals with high initial scores showed greater increases in exploration score than individuals with low initial scores; individual by environment interaction ('I x E') with respect to test sequence did not vary between populations. 5. Our findings imply that individual variation in both average level of behaviour and behavioural plasticity may generally characterize wild great tit populations and may largely be shaped by mechanisms acting within populations. Experimental approaches are now needed to confirm that individual differences in behavioural plasticity (habituation) - not other hidden biological factors caused the observed patterns of I x E. Establishing the evolutionary causes and consequences of this variation in habituation to novelty constitutes an exciting future challenge.
- Published
- 2012
15. Evolutionary signals of selection on cognition from the great tit genome and methylome
- Author
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Universitat Politècnica de València. Departamento de Ciencia Animal - Departament de Ciència Animal, Universitat Politècnica de València. Instituto de Investigación para la Gestión Integral de Zonas Costeras - Institut d'Investigació per a la Gestió Integral de Zones Costaneres, European Research Council, Biotechnology and Biological Sciences Research Council, Reino Unido, UK Research and Innovation, Netherlands Organization for Scientific Research, International HapMap Project, Rural Development Administration, Corea del Sur, Laine, Veronika N., Gossmann, Toni I., Schachtschneider, Kyle M., Garroway, Colin J., Madsen, Ole, Verhoeven, Koen J. F., de Jager, Victor, Megens, Hendrik-Jan, Warren, Wesley C., Minx, Patrick, Crooijmans, Richard P. M. A., Corcoran, Padraic, Great Tit HapMap Consortium, Sheldon, Ben C., Slate, Jon, Universitat Politècnica de València. Departamento de Ciencia Animal - Departament de Ciència Animal, Universitat Politècnica de València. Instituto de Investigación para la Gestión Integral de Zonas Costeras - Institut d'Investigació per a la Gestió Integral de Zones Costaneres, European Research Council, Biotechnology and Biological Sciences Research Council, Reino Unido, UK Research and Innovation, Netherlands Organization for Scientific Research, International HapMap Project, Rural Development Administration, Corea del Sur, Laine, Veronika N., Gossmann, Toni I., Schachtschneider, Kyle M., Garroway, Colin J., Madsen, Ole, Verhoeven, Koen J. F., de Jager, Victor, Megens, Hendrik-Jan, Warren, Wesley C., Minx, Patrick, Crooijmans, Richard P. M. A., Corcoran, Padraic, Great Tit HapMap Consortium, Sheldon, Ben C., and Slate, Jon
- Abstract
[EN] For over 50 years, the great tit (Parus major) has been a model species for research in evolutionary, ecological and behavioural research; in particular, learning and cognition have been intensively studied. Here, to provide further insight into the molecular mechanisms behind these important traits, we de novo assemble a great tit reference genome and whole-genome re-sequence another 29 individuals from across Europe. We show an overrepresentation of genes related to neuronal functions, learning and cognition in regions under positive selection, as well as increased CpG methylation in these regions. In addition, great tit neuronal non-CpG methylation patterns are very similar to those observed in mammals, suggesting a universal role in neuronal epigenetic regulation which can affect learning-, memory-and experience-induced plasticity. The high-quality great tit genome assembly will play an instrumental role in furthering the integration of ecological, evolutionary, behavioural and genomic approaches in this model species.
- Published
- 2016
16. Basal metabolic rate and the rate of senescence in the great tit
- Subjects
RED SQUIRRELS ,senescence ,uncoupling-to-survive ,life-history ,ENERGY-METABOLISM ,INDIVIDUAL VARIATION ,LONG-TERM REPEATABILITY ,BODY-MASS ,OVER-WINTER SURVIVAL ,wild population ,LIFE ,WILD BIRD POPULATION ,SIZE ,great tit ,ageing ,Parus major ,energy expenditure ,basal metabolic rate ,ZEBRA FINCHES ,rate-of-living - Abstract
1. Between-individual variation in rates of senescence has recently been found to relate to natal and early-life conditions in several natural populations. Mechanistic theories of senescence have predicted between-individual variation in basal metabolic rate (BMR) to also underlie such variation in rates of senescence. The question whether variation in BMR is linked to natal and early-life conditions with effects on senescence has, however, not yet been addressed.2. Using cross-sectional data on winter BMR of nearly 700 individual great tits Parus major, we tested whether factors associated with individual variation in the rate of senescence were also associated with differences in BMR.3. We found that winter BMR was a repeatable trait (36%), and that variation in winter BMR was partly explained by body mass, and interactive effects of sex, age and seasonal date with ambient temperature.4. Our data, however, revealed that neither the level of BMR, nor its age-specific decline, was explained by three parameters previously shown to underlie variation in rates of reproductive senescence in our study population: maternal age, immigrant status and early-life reproductive performance.5. These results therefore did not support the suggestion that variation in BMR underlies variation in rates of reproductive senescence in relation to maternal age, immigrant status and early-life reproductive performance.6. We further found a low repeatability of BMR from winter to the subsequent breeding season (1%, n = 55), which suggested that a relationship between BMR and proxies for rates of senescence may have been absent in our data set because winter BMR did not represent year-round metabolic strategies.7. Further study, preferably using longitudinal data, is required to resolve the link between BMR at different times of year and senescence.
- Published
- 2011
17. Fluctuating selection and the maintenance of individual and sex-specific diet specialization in free-living oystercatchers
- Author
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Kees Oosterbeek, Bruno J. Ens, Joost M. Tinbergen, Lyanne Brouwer, Martijn van de Pol, and Both group
- Subjects
Male ,Time Factors ,Zoology ,Biology ,environmental variability ,HAEMATOPUS-OSTRALEGUS ,Generalist and specialist species ,nonlinear selection gradient ,Charadriiformes ,Specialization (functional) ,PHENOTYPIC PLASTICITY ,Genetics ,Animals ,Selection, Genetic ,Wader ,cultural evolution ,trophic polymorphism ,Ecosystem ,Ecology, Evolution, Behavior and Systematics ,Selection (genetic algorithm) ,Sex Characteristics ,Phenotypic plasticity ,FEEDING METHOD ,BILL ,Natural selection ,Models, Genetic ,Disruptive selection ,Ecology ,EURASIAN OYSTERCATCHERS ,CICHLID FISH ,biology.organism_classification ,Biological Evolution ,Diet ,Annual fitness ,WILD BIRD POPULATION ,NATURAL-SELECTION ,Fertility ,Phenotype ,response to selection ,MYTILUS-EDULIS ,Trait ,DIMORPHISM ,Female ,Genetic Fitness ,General Agricultural and Biological Sciences - Abstract
Fluctuating and disruptive selection are important mechanisms for maintaining intrapopulation trait variation. Nonetheless, few field studies quantify selection pressures over long periods and identify what causes them to fluctuate. Diet specialists in oystercatchers differ in short-term payoffs (intake), but their long-term payoffs are hypothesized to be condition dependent. We test whether phenotypic selection on diet specialization fluctuates between years due to the frequency of specialists, competitor density, prey abundance, and environmental conditions. Short-term payoffs proved to be poor predictors of long-term fitness payoffs of specialization. Sex-differences in diet specialization were maintained by opposing directional fecundity and viability selection between the sexes. Contrasting other studies, selection on individual diet specialization was neither negative frequency- or density-dependent nor dependent on prey abundance. Notwithstanding, viability selection fluctuated strongly (stabilizing disruptive) over the 26-year study period: slightly favoring generalists in most years, but strongly disfavoring generalists in rare harsh winters, suggesting generalists cannot cope with extreme conditions. Although selection fluctuated, mean selection on specialists was weak, which can explain how individual specialization can persist over long periods. Because rare events can dramatically affect long-term selective landscapes, more care should be taken to match the timescale of evolutionary studies to the temporal variability of critical environmental conditions.
- Published
- 2010
18. Behavioural reaction norms
- Author
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Niels Jeroen Dingemanse, Denis Réale, Anahita J. N. Kazem, and Jonathan Wright
- Subjects
LIFE-HISTORY ,media_common.quotation_subject ,Ecology (disciplines) ,Models, Biological ,Behavioral syndrome ,Stress, Physiological ,PHENOTYPIC PLASTICITY ,Personality ,Animals ,Ecology, Evolution, Behavior and Systematics ,Ecosystem ,media_common ,Phenotypic plasticity ,Natural selection ,Behavior, Animal ,Ecology ,Boldness ,AVIAN PERSONALITIES ,Invertebrates ,EVOLUTION ,WILD BIRD POPULATION ,NATURAL-SELECTION ,Variation (linguistics) ,EXPLORATORY-BEHAVIOR ,Vertebrates ,AMERICAN RED SQUIRRELS ,Adaptation ,Psychology ,GREAT TITS ,QUANTITATIVE GENETICS ,Cognitive psychology - Abstract
Recent studies in the field of behavioural ecology have revealed intriguing variation in behaviour within single populations. Increasing evidence suggests that individual animals differ in their average level of behaviour displayed across a range of contexts (animal 'personality'), and in their responsiveness to environmental variation (plasticity), and that these phenomena can be considered complementary aspects of the individual phenotype. How should this complex variation be studied? Here, we outline how central ideas in behavioural ecology and quantitative genetics can be combined within a single framework based on the concept of 'behavioural reaction norms'. This integrative approach facilitates analysis of phenomena usually studied separately in terms of personality and plasticity, thereby enhancing understanding of their adaptive nature.
- Published
- 2010
19. Interplay of robustness and plasticity of life history traits in habitats with different thermal regimes
- Author
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Liefting, M., van Grunsven, R.H.A., Morrissey, M.B.M., Timmermans, M., and Ellers, J.
- Subjects
wild bird population ,drosophila-melanogaster ,reaction norms ,soil arthropod ,Plant Ecology and Nature Conservation ,indeterminate growth ,PE&RC ,phenotypic plasticity ,orchesella-cincta collembola ,environmental canalization ,evolution ,Plantenecologie en Natuurbeheer ,genetic-structure - Abstract
Phenotypic plasticity describes the ability of an individual to alter its phenotype in response to the environment and is potentially adaptive when dealing with environmental variation. However, robustness in the face of a changing environment may often be beneficial for traits that are tightly linked to fitness. We hypothesized that robustness of some traits may depend on specific patterns of plasticity within and among other traits. We used a reaction norm approach to study robustness and phenotypic plasticity of three life-history traits of the collembolan Orchesella cincta in environments with different thermal regimes. We measured adult mass, age at maturity and growth rate of males and females from heath and forest habitats at two temperatures (12 and 22 °C). We found evidence for ecotype-specific robustness of female adult mass to temperature, with a higher level of robustness in the heath ecotype. This robustness is facilitated by plastic adjustments of growth rate and age at maturity. Furthermore, female fecundity is strongly influenced by female adult mass, explaining the importance of realizing a high mass across temperatures for females. These findings indicate that different predicted outcomes of life-history theory can be combined within one species' ontogeny and that models describing life-history strategies should not assume that traits like growth rate are maximized under all conditions. On a methodological note, we report a systematic inflation of variation when standard deviations and correlation coefficients are calculated from family means as opposed to individual data within a family structure.
- Published
- 2015
20. Why breeding time has not responded to selection for earlier breeding in a songbird population
- Author
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Marcel E. Visser, Phillip Gienapp, Erik Postma, Animal Population Biology, and Neurobiology
- Subjects
Aging ,CLUTCH-SIZE ,Time Factors ,LONG-TERM ,Oviposition ,Population ,breeding value ,egg-laying date ,Songbirds ,NIOO/PG/NPCC ,GREAT TIT ,Parus major ,LAYING DATE ,Genetic variation ,Genetics ,environmental covariance ,Animals ,TIT PARUS-MAJOR ,Selection, Genetic ,education ,Ecology, Evolution, Behavior and Systematics ,Selection (genetic algorithm) ,Parus ,education.field_of_study ,Natural selection ,biology ,Disruptive selection ,Reproduction ,animal model ,natural selection ,Fecundity ,biology.organism_classification ,WILD BIRD POPULATION ,NATURAL-SELECTION ,PHENOTYPIC SELECTION ,Evolutionary biology ,Trait ,Female ,COLLARED FLYCATCHER ,General Agricultural and Biological Sciences ,DIRECTIONAL SELECTION - Abstract
A crucial assumption underlying the breeders' equation is that selection acts directly on the trait of interest, and not on an unmeasured environmental factor which affects both fitness and the trait. Such an environmentally induced covariance between a trait and fitness has been repeatedly proposed as an explanation for the lack of response to selection on avian breeding time. We tested this hypothesis using a long-term dataset from a Dutch great tit (Parus major) population. Although there was strong selection for earlier breeding in this population, egg-laying dates have changed only marginally over the last decades. Using a so-called animal model, we quantified the additive genetic variance in breeding time and predicted breeding values for females. Subsequently, we compared selection at the phenotypic and genetic levels for two fitness components, fecundity and adult survival. We found no evidence for an environmentally caused covariance between breeding time and fitness or counteracting selection on the different fitness components. Consequently, breeding time should respond to selection but the expected response to selection was too small to be detected.
- Published
- 2006
21. Female collared flycatchers adjust yolk testosterone to male age, but not to attractiveness
- Author
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Péter Péczely, Hubert Schwabl, Gábor Michl, László Zsolt Garamszegi, and János Török
- Subjects
medicine.medical_specialty ,food.ingredient ,Population ,Zoology ,differential maternal investment ,sexual selection ,yolk testosterone ,wild bird population ,food ,Internal medicine ,Yolk ,biology.animal ,medicine ,Psychology ,Mating ,education ,Biology ,Ecology, Evolution, Behavior and Systematics ,education.field_of_study ,biology ,Testosterone (patch) ,Passerine ,Chemistry ,Endocrinology ,Sexual selection ,embryonic structures ,Animal Science and Zoology ,Human medicine ,Oviparity ,Paternal care - Abstract
The differential allocation hypothesis predicts that females invest more resources into reproduction when mating with attractive males. In oviparous animals this can include prefertilization decisions such as the production of larger eggs and the deposition of hormones, such as the steroid testosterone, into yolks. On the other hand, a compensatory hypothesis posits that females allocate more resources into the eggs when mated with males of inferior quality. In the present study, we show that free-living females of the collared flycatcher (Ficedula albicollis), a small passerine bird, do not produce larger eggs or deposit more testosterone into eggs when mating with attractive males reflected by a large forehead patch size, which is contrary to the prediction of the differential allocation hypothesis. However, we found higher yolk testosterone concentrations in eggs laid for young than older males. Because in young males genetic quality, parental experience, or willingness to invest into paternal care is likely to be low, high yolk testosterone level in their clutches may indicate that their females follow a compensatory tactic. They may elicit more paternal care from young, inexperienced males by hormonally increasing nestling begging. Laying date was also correlated with yolk testosterone level; however, when we controlled for it, male age still remained a strong determinant of testosterone allocation. Key words: differential maternal investment; sexual selection; yolk testosterone; wild bird population. [Behav Ecol 16:383–388 (2005)]
- Published
- 2005
22. Timing as a sexually selected trait: the right mate at the right moment
- Author
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Roelof A. Hut, Michaela Hau, Timothy J. Greives, Gabriela Wagner, Davide M. Dominoni, Stefania Casagrande, David G. Hazlerigg, C. Loren Buck, and Animal Ecology (AnE)
- Subjects
Male ,circadian rhythm ,0106 biological sciences ,0301 basic medicine ,PHOTOPERIODIC TIME MEASUREMENT ,Time Factors ,Ecology (disciplines) ,ARCTIC GROUND-SQUIRRELS ,Biology ,Affect (psychology) ,010603 evolutionary biology ,01 natural sciences ,General Biochemistry, Genetics and Molecular Biology ,Birds ,03 medical and health sciences ,WRENS MALURUS-CYANEUS ,Animals ,sexual selection ,Selection, Genetic ,Mating ,Life History Traits ,Selection (genetic algorithm) ,Mammals ,Chronobiology ,SUPERB FAIRY-WRENS ,Reproductive success ,Ecology ,DEEP BRAIN PHOTORECEPTOR ,timing of reproduction ,EXTRARETINAL LIGHT PERCEPTION ,Articles ,Mating Preference, Animal ,display behaviour ,AVIAN CIRCADIAN SYSTEM ,DAILY ACTIVITY PATTERNS ,WILD BIRD POPULATION ,CLOCK GENE POLYMORPHISM ,030104 developmental biology ,Evolutionary biology ,international ,Sexual selection ,Trait ,Female ,Seasons ,circannual rhythm ,General Agricultural and Biological Sciences - Abstract
Sexual selection favours the expression of traits in one sex that attract members of the opposite sex for mating. The nature of sexually selected traits such as vocalization, colour and ornamentation, their fitness benefits as well as their costs have received ample attention in field and laboratory studies. However, sexually selected traits may not always be expressed: coloration and ornaments often follow a seasonal pattern and behaviours may be displayed only at specific times of the day. Despite the widely recognized differences in the daily and seasonal timing of traits and their consequences for reproductive success, the actions of sexual selection on the temporal organization of traits has received only scant attention. Drawing on selected examples from bird and mammal studies, here we summarize the current evidence for the daily and seasonal timing of traits. We highlight that molecular advances in chronobiology have opened exciting new opportunities for identifying the genetic targets that sexual selection may act on to shape the timing of trait expression. Furthermore, known genetic links between daily and seasonal timing mechanisms lead to the hypothesis that selection on one timescale may simultaneously also affect the other. We emphasize that studies on the timing of sexual displays of both males and females from wild populations will be invaluable for understanding the nature of sexual selection and its potential to act on differences within and between the sexes in timing. Molecular approaches will be important for pinpointing genetic components of biological rhythms that are targeted by sexual selection, and to clarify whether these represent core or peripheral components of endogenous clocks. Finally, we call for a renewed integration of the fields of evolution, behavioural ecology and chronobiology to tackle the exciting question of how sexual selection contributes to the evolution of biological clocks. This article is part of the themed issue ‘Wild clocks: integrating chronobiology and ecology to understand timekeeping in free-living animals’.
- Published
- 2017
23. The Heritability of Mating Behaviour in a Fly and Its Plasticity in Response to the Threat of Sperm Competition
- Author
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Amanda Bretman, Anne Lizé, Tom A. R. Price, Craig A. Walling, School of Biological Sciences, University of Leeds, Institute of Integrative Biology, University of Liverpool, and University of Edinburgh
- Subjects
SELECTION ,Male ,0106 biological sciences ,BY-ENVIRONMENT INTERACTIONS ,Sexual Selection ,SEX-RATIO POLYMORPHISM ,REACTION NORMS ,lcsh:Medicine ,01 natural sciences ,Drosophila pseudoobscura ,Sexual Behavior, Animal ,Behavioral Ecology ,Copulation ,COPULATION DURATION ,Mating ,lcsh:Science ,reproductive and urinary physiology ,Animal Management ,media_common ,Genetics ,0303 health sciences ,education.field_of_study ,Multidisciplinary ,Ecology ,Animal Behavior ,biology ,DROSOPHILA-PSEUDOOBSCURA ,GENETIC-VARIATION ,Animal Models ,Adaptation, Physiological ,Spermatozoa ,WILD BIRD POPULATION ,Drosophila ,Female ,Sex ratio ,Research Article ,Evolutionary Processes ,Sexual Behavior ,media_common.quotation_subject ,Population ,010603 evolutionary biology ,Competition (biology) ,03 medical and health sciences ,Model Organisms ,PHENOTYPIC PLASTICITY ,Animals ,Sex Ratio ,education ,Biology ,Sperm competition ,030304 developmental biology ,Evolutionary Biology ,Phenotypic plasticity ,lcsh:R ,fungi ,Heritability ,biology.organism_classification ,Evolutionary Ecology ,Evolutionary biology ,lcsh:Q ,Veterinary Science ,[SDE.BE]Environmental Sciences/Biodiversity and Ecology ,Zoology ,Entomology ,NATURAL-POPULATIONS - Abstract
International audience; Phenotypic plasticity is a key mechanism by which animals can cope with rapidly changeable environments, but the evolutionary lability of such plasticity remains unclear. The socio-sexual environment can fluctuate very rapidly, affecting both the frequency of mating opportunities and the level of competition males may face. Males of many species show plastic behavioural responses to changes in social environment, in particular the presence of rival males. For example, Drosophila pseudoobscura males respond to rivals by extending mating duration and increasing ejaculate size. Whilst such responses are predicted to be adaptive, the extent to which the magnitude of response is heritable, and hence selectable, is unknown. We investigated this using isofemale lines of the fruit fly D. pseudoobscura, estimating heritability of mating duration in males exposed or not to a rival, and any genetic basis to the change in this trait between these environments (i.e. degree of plasticity). The two populations differed in population sex ratio, and the presence of a sex ratio distorting selfish chromosome. We find that mating duration is heritable, but no evidence of population differences. We find no significant heritability of plasticity in mating duration in one population, but borderline significant heritability of plasticity in the second. This difference between populations might be related to the presence of the sex ratio distorting selfish gene in the latter population, but this will require investigation in additional populations to draw any conclusions. We suggest that there is scope for selection to produce an evolutionary response in the plasticity of mating duration in response to rivals in D. pseudoobscura, at least in some populations.
- Published
- 2014
24. Climate change, adaptation, and phenotypic plasticity: the problem and the evidence
- Author
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Juha Merilä, Andrew P. Hendry, Biosciences, Ecology and Evolutionary Biology, and Ecological Genetics Research Unit
- Subjects
0106 biological sciences ,THEORETICAL PREDICTIONS ,Environmental change ,Best practice ,education ,Climate change ,Inference ,Biology ,010603 evolutionary biology ,01 natural sciences ,ENVIRONMENTAL-CHANGE ,03 medical and health sciences ,LOCAL ADAPTATION ,GENETIC RESPONSES ,individual plasticity ,evolution ,genetics ,skin and connective tissue diseases ,ANIMAL POPULATIONS ,Ecology, Evolution, Behavior and Systematics ,global change ,030304 developmental biology ,Local adaptation ,0303 health sciences ,Phenotypic plasticity ,Natural selection ,Ecology ,QUANTITATIVE TRAITS ,natural selection ,environmental change ,Variety (cybernetics) ,ADAPTIVE EVOLUTION ,WILD BIRD POPULATION ,NATURAL-SELECTION ,13. Climate action ,Perspective ,1181 Ecology, evolutionary biology ,sense organs ,General Agricultural and Biological Sciences ,DIRECTIONAL SELECTION ,Cognitive psychology - Abstract
Many studies have recorded phenotypic changes in natural populations and attributed them to climate change. However, controversy and uncertainty has arisen around three levels of inference in such studies. First, it has proven difficult to conclusively distinguish whether phenotypic changes are genetically based or the result of phenotypic plasticity. Second, whether or not the change is adaptive is usually assumed rather than tested. Third, inferences that climate change is the specific causal agent have rarely involved the testing - and exclusion - of other potential drivers. We here review the various ways in which the above inferences have been attempted, and evaluate the strength of support that each approach can provide. This methodological assessment sets the stage for 11 accompanying review articles that attempt comprehensive syntheses of what is currently known - and not known - about responses to climate change in a variety of taxa and in theory. Summarizing and relying on the results of these reviews, we arrive at the conclusion that evidence for genetic adaptation to climate change has been found in some systems, but is still relatively scarce. Most importantly, it is clear that more studies are needed - and these must employ better inferential methods - before general conclusions can be drawn. Overall, we hope that the present paper and special issue provide inspiration for future research and guidelines on best practices for its execution.
- Published
- 2014
25. Replicated high-density genetic maps of two great tit populations reveal fine-scale genomic departures from sex-equal recombination rates
- Author
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van Oers, K., Santure, A.W., de Cauwer, I., van Bers, N.E.M., Crooijmans, R.P.M.A., Sheldon, B.C., Visser, M.E., Slate, J., Groenen, M.A.M., van Oers, K., Santure, A.W., de Cauwer, I., van Bers, N.E.M., Crooijmans, R.P.M.A., Sheldon, B.C., Visser, M.E., Slate, J., and Groenen, M.A.M.
- Abstract
Linking variation in quantitative traits to variation in the genome is an important, but challenging task in the study of life-history evolution. Linkage maps provide a valuable tool for the unravelling of such trait-gene associations. Moreover, they give insight into recombination landscapes and between-species karyotype evolution. Here we used genotype data, generated from a 10k single-nucleotide polymorphism (SNP) chip, of over 2000 individuals to produce high-density linkage maps of the great tit (Parus major), a passerine bird that serves as a model species for ecological and evolutionary questions. We created independent maps from two distinct populations: a captive F2-cross from The Netherlands (NL) and a wild population from the United Kingdom (UK). The two maps contained 6554 SNPs in 32 linkage groups, spanning 2010¿cM and 1917¿cM for the NL and UK populations, respectively, and were similar in size and marker order. Subtle levels of heterochiasmy within and between chromosomes were remarkably consistent between the populations, suggesting that the local departures from sex-equal recombination rates have evolved. This key and surprising result would have been impossible to detect if only one population was mapped. A comparison with zebra finch Taeniopygia guttata, chicken Gallus gallus and the green anole lizard Anolis carolinensis genomes provided further insight into the evolution of avian karyotypes.
- Published
- 2014
26. Phenotypic plasticity in evolutionary rescue experiments
- Author
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Richard Gomulkiewicz, Romain Gallet, Robert D. Holt, Simon Fellous, Luis-Miguel Chevin, Centre d’Ecologie Fonctionnelle et Evolutive (CEFE), Centre National de la Recherche Scientifique (CNRS)-Université de Montpellier (UM)-École pratique des hautes études (EPHE), Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Institut National de la Recherche Agronomique (INRA)-Université Paul-Valéry - Montpellier 3 (UPVM)-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut de Recherche pour le Développement (IRD [France-Sud]), Washington State University (WSU), Florida State University (FSU), Florida State University [Tallahassee] (FSU), Centre de Biologie pour la Gestion des Populations (UMR CBGP), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut National de la Recherche Agronomique (INRA)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Université de Montpellier (UM)-Institut de Recherche pour le Développement (IRD [France-Sud])-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro), Université Montpellier 2 - Sciences et Techniques (UM2), 'ContempEvol' from the ANR 'retour post-doc' programme, ANR [2010 BLANC 1715 02], US National Science Foundation [DEB-0919376], and [ANR-09-PEXT-011]
- Subjects
0106 biological sciences ,PREVENT EXTINCTION ,[SDV]Life Sciences [q-bio] ,Population Dynamics ,evolution of plasticity ,REACTION NORMS ,01 natural sciences ,generalism ,changing environment ,THERMAL SENSITIVITY ,Genetics ,0303 health sciences ,education.field_of_study ,Experimental evolution ,CLIMATE-CHANGE ,extinction ,Articles ,ENVIRONMENTAL-CHANGES ,Plants ,Adaptation, Physiological ,Biological Evolution ,WILD BIRD POPULATION ,Phenotype ,Competitive behavior ,ESCHERICHIA-COLI ,MEASURING SELECTION ,General Agricultural and Biological Sciences ,Evolutionary rescue ,Competitive Behavior ,Population ,Biology ,Environment ,Extinction, Biological ,010603 evolutionary biology ,General Biochemistry, Genetics and Molecular Biology ,03 medical and health sciences ,Genetic Evolution ,Stress, Physiological ,Animals ,experimental evolution ,Selection, Genetic ,education ,030304 developmental biology ,Population Density ,Phenotypic plasticity ,Bacteria ,Robustness (evolution) ,QUANTITATIVE GENETIC-ANALYSIS ,ADAPTIVE PLASTICITY ,Multicellular organism ,evolutionary demography ,Evolutionary biology ,Mutation ,Genetic Fitness - Abstract
International audience; Population persistence in a new and stressful environment can be influenced by the plastic phenotypic responses of individuals to this environment, and by the genetic evolution of plasticity itself. This process has recently been investigated theoretically, but testing the quantitative predictions in the wild is challenging because (i) there are usually not enough population replicates to deal with the stochasticity of the evolutionary process, (ii) environmental conditions are not controlled, and (iii) measuring selection and the inheritance of traits affecting fitness is difficult in natural populations. As an alternative, predictions from theory can be tested in the laboratory with controlled experiments. To illustrate the feasibility of this approach, we briefly review the literature on the experimental evolution of plasticity, and on evolutionary rescue in the laboratory, paying particular attention to differences and similarities between microbes and multicellular eukaryotes. We then highlight a set of questions that could be addressed using this framework, which would enable testing the robustness of theoretical predictions, and provide new insights into areas that have received little theoretical attention to date.
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- 2013
27. Predicting demographically-sustainable rates of adaptation: can great tit breeding time keep pace with climate change?
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John M. McNamara, Phillip Gienapp, Thomas E. Reed, Marjolein E. Lof, Marcel E. Visser, Simon Verhulst, Animal Ecology (AnE), Verhulst lab, and Beersma lab
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SELECTION ,Time Factors ,Environmental change ,PREVENT EXTINCTION ,Population Dynamics ,Population ,Adaptation, Biological ,Climate change ,adaptation ,Breeding ,Biology ,PARUS-MAJOR ,Models, Biological ,General Biochemistry, Genetics and Molecular Biology ,ENVIRONMENTAL-CHANGE ,LIMITS ,Econometrics ,Animals ,Passeriformes ,education ,Ovum ,Maladaptation ,Parus ,education.field_of_study ,Extinction ,model ,Ecology ,Temperature ,ADAPTIVE PHENOTYPIC PLASTICITY ,GENETIC-VARIATION ,Articles ,environmental change ,biology.organism_classification ,Biological Evolution ,Stochastic programming ,Term (time) ,WILD BIRD POPULATION ,REPRODUCTION ,Phenotype ,climate change ,great tit ,evolutionary rescue ,international ,Female ,Genetic Fitness ,Seasons ,General Agricultural and Biological Sciences ,Forecasting - Abstract
Populations need to adapt to sustained climate change, which requires micro-evolutionary change in the long term. A key question is how the rate of this micro-evolutionary change compares with the rate of environmental change, given that theoretically there is a ‘critical rate of environmental change’ beyond which increased maladaptation leads to population extinction. Here, we parametrize two closely related models to predict this critical rate using data from a long-term study of great tits ( Parus major ). We used stochastic dynamic programming to predict changes in optimal breeding time under three different climate scenarios. Using these results we parametrized two theoretical models to predict critical rates. Results from both models agreed qualitatively in that even ‘mild’ rates of climate change would be close to these critical rates with respect to great tit breeding time, while for scenarios close to the upper limit of IPCC climate projections the calculated critical rates would be clearly exceeded with possible consequences for population persistence. We therefore tentatively conclude that micro-evolution, together with plasticity, would rescue only the population from mild rates of climate change, although the models make many simplifying assumptions that remain to be tested.
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- 2013
28. Climate change, breeding date and nestling diet: how temperature differentially affects seasonal changes in pied flycatcher diet depending on habitat variation
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Burger, Claudia, Belskii, Eugen, Eeva, Tapio, Laaksonen, Toni, Maegi, Marko, Maend, Raivo, Qvarnstrom, Anna, Slagsvold, Tore, Veen, Thor, Visser, Marcel E., Wiebe, Karen L., Wiley, Chris, Wright, Jonathan, Both, Christiaan, Mägi, Marko, Mänd, Raivo, Qvarnström, Anna, Both group, Weissing group, and Beersma lab
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FOOD AVAILABILITY ,demography ,food web ,fungi ,passerines ,FICEDULA-HYPOLEUCA ,Ficedula hypoleuca ,glmmPQL ,foraging ,PHENOLOGICAL RESPONSE ,WILD BIRD POPULATION ,GEOGRAPHICAL VARIATION ,PHENOTYPIC PLASTICITY ,REPRODUCTIVE SUCCESS ,TITS PARUS-MAJOR ,GREAT TITS ,PROVISIONING BEHAVIOR - Abstract
1. Climate warming has led to shifts in the seasonal timing of species. These shifts can differ across trophic levels, and as a result, predator phenology can get out of synchrony with prey phenology. This can have major consequences for predators such as population declines owing to low reproductive success. However, such trophic interactions are likely to differ between habitats, resulting in differential susceptibility of populations to increases in spring temperatures. A mismatch between breeding phenology and food abundance might be mitigated by dietary changes, but few studies have investigated this phenomenon. Here, we present data on nestling diets of nine different populations of pied flycatchers Ficedula hypoleuca, across their breeding range. This species has been shown to adjust its breeding phenology to local climate change, but sometimes insufficiently relative to the phenology of their presumed major prey: Lepidoptera larvae. In spring, such larvae have a pronounced peak in oak habitats, but to a much lesser extent in coniferous and other deciduous habitats. 2. We found strong seasonal declines in the proportions of caterpillars in the diet only for oak habitats, and not for the other forest types. The seasonal decline in oak habitats was most strongly observed in warmer years, indicating that potential mismatches were stronger in warmer years. However, in coniferous and other habitats, no such effect of spring temperature was found. 3. Chicks reached somewhat higher weights in broods provided with higher proportions of caterpillars, supporting the notion that caterpillars are an important food source and that the temporal match with the caterpillar peak may represent an important component of reproductive success. 4. We suggest that pied flycatchers breeding in oak habitats have greater need to adjust timing of breeding to rising spring temperatures, because of the strong seasonality in their food. Such between-habitat differences can have important consequences for population dynamics and should be taken into account in studies on phenotypic plasticity and adaptation to climate change.
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- 2012
29. Social environment affects juvenile dispersal in great tits (Parus major)
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Nicolaus, Marion, Michler, Stephanie P. M., Jalvingh, Kirsten M., Ubels, Richard, van der Velde, Marco, Komdeur, Jan, Both, Christiaan, Tinbergen, Joost M., Both group, Wertheim lab, and Komdeur lab
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BROOD SIZE ,intraspecific competition ,prospecting ,Habitat selection ,social information ,WILD BIRD POPULATION ,natal dispersal ,SEX-SPECIFIC DISPERSAL ,Parus major ,BREEDING HABITAT SELECTION ,CONSPECIFIC ATTRACTION ,REPRODUCTIVE SUCCESS ,GATHERING PUBLIC INFORMATION ,public information ,BLUE TITS ,SETTLEMENT DECISIONS ,informed dispersal - Abstract
1. Habitat selection can affect individual fitness, and therefore, individuals are expected to assess habitat quality of potential breeding sites before settlement. 2. We investigated the role of social environment on juvenile dispersal behaviour in the great tit (Parus major). Two main contradictory hypotheses can be formulated regarding social effects on juvenile dispersal as follows: (i) High fledgling density and sex ratio may enhance the intensity of local (kin) competition and, therefore, reduce individual survival chance, enhance emigration and reduce settlement (repulsion hypothesis) (ii) Alternatively, high fledgling density and sex ratio may signal high-quality habitat or lead to aggregation and thus increase individual survival chance, reduce emigration and enhance settlement (attraction hypothesis). 3. To disentangle positive from negative effects of high density and male-biased sex ratio on dispersal, we manipulated the social composition of the fledgling population in 12 semi-isolated nest-box areas (plots) via a change of fledgling density (low/high) as well as fledgling sex ratio (female-biased/balanced/male-biased) across 3 years. We then tested whether experimental variation in male and female fledgling densities affected variation in local survival, emigration and settlement of juveniles, and whether social effects on survival and dispersal support the repulsion or attraction hypothesis. 4. We found no experimental effects on local survival and emigration probabilities. However, consistent with the attraction hypothesis, settlement was significantly and positively affected by local experimental sex ratio in each of the study years: both male and female juveniles avoided female-biased plots and settled more in plots that were balanced and male-biased the previous year. 5. Our study provides unprecedented experimental evidence that local sex ratio plays a causal role in habitat selection. We suggest that settlers avoid female-biased plots because a high proportion of females may reflect the absence or the low quality of local resources in the habitat. Alternatively, male territory acquisition may be facilitated by a high local density of candidate males, and therefore, juveniles were less successful in settling in female-biased plots.
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- 2012
30. Selection on plasticity of seasonal life-history traits using random regression mixed model analysis
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Brommer, Jon E, Kontiainen, Pekka, Pietiäinen, Hannu, and Biosciences
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clutch size ,education ,REACTION NORMS ,URAL OWL ,natural selection ,BEHAVIORAL SYNDROMES ,ECOLOGY ,phenotypic plasticity ,EVOLUTION ,WILD BIRD POPULATION ,NATURAL-SELECTION ,Bird ,reaction norm ,LAYING DATE ,1181 Ecology, evolutionary biology ,Original Research - Abstract
Theory considers the covariation of seasonal life-history traits as an optimal reaction norm, implying that deviating from this reaction norm reduces fitness. However, the estimation of reaction-norm properties (i.e., elevation, linear slope, and higher order slope terms) and the selection on these is statistically challenging. We here advocate the use of random regression mixed models to estimate reaction-norm properties and the use of bivariate random regression to estimate selection on these properties within a single model. We illustrate the approach by random regression mixed models on 1115 observations of clutch sizes and laying dates of 361 female Ural owl Strix uralensis collected over 31 years to show that (1) there is variation across individuals in the slope of their clutch size-laying date relationship, and that (2) there is selection on the slope of the reaction norm between these two traits. Hence, natural selection potentially drives the negative covariance in clutch size and laying date in this species. The random-regression approach is hampered by inability to estimate nonlinear selection, but avoids a number of disadvantages (stats-on-stats, connecting reaction-norm properties to fitness). The approach is of value in describing and studying selection on behavioral reaction norms (behavioral syndromes) or life-history reaction norms. The approach can also be extended to consider the genetic underpinning of reaction-norm properties.
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- 2012
31. Quantitative genetics of behavioural reaction norms: Genetic correlations between personality and behavioural plasticity vary across stickleback populations
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Dingemanse, N. J., Barber, I., Wright, J., and Brommer, J. E.
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TEMPERAMENT ,FITNESS CONSEQUENCES ,genotype by environment interaction ,heritability ,ECOLOGY ,INDIVIDUAL-DIFFERENCES ,EVOLUTION ,WILD BIRD POPULATION ,PHENOTYPIC PLASTICITY ,GASTEROSTEUS-ACULEATUS ,phenotypic gambit ,TIT PARUS-MAJOR ,predation ,genetic variation in plasticity ,adaptive population differentiation ,3-SPINED STICKLEBACK - Abstract
Behavioural ecologists have proposed various evolutionary mechanisms as to why different personality types coexist. Our ability to understand the evolutionary trajectories of personality traits requires insights from the quantitative genetics of behavioural reaction norms. We assayed > 1000 pedigreed stickleback for initial exploration behaviour of a novel environment, and subsequent changes in exploration over a few hours, representing their capacity to adjust their behaviour to changes in perceived novelty and risk. We found heritable variation in both the average level of exploration and behavioural plasticity, and population differences in the sign of the genetic correlation between these two reaction norm components. The phenotypic correlation was not a good indicator of the genetic correlation, implying that quantitative genetics are necessary to appropriately evaluate evolutionary hypotheses in cases such as these. Our findings therefore have important implications for future studies concerning the evolution of personality and plasticity.
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- 2012
32. Variation in personality and behavioural plasticity across four populations of the great tit Parus major
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Dingemanse, Niels J., Bouwman, Karen M., van de Pol, Martijn, van Overveld, Thijs, Patrick, Samantha C., Matthysen, Erik, and Quinn, John L.
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CONSISTENT INDIVIDUAL-DIFFERENCES ,AVIAN PERSONALITIES ,REACTION NORMS ,temperament ,habituation ,VARIABLE ENVIRONMENT ,ECOLOGY ,Chemistry ,WILD BIRD POPULATION ,REALIZED HERITABILITY ,personality ,EXPLORATORY-BEHAVIOR ,PHENOTYPIC PLASTICITY ,individual by environment interaction ,EVOLUTIONARY ,Biology ,behavioural reaction norm ,local adaptation - Abstract
1. Interest in the evolutionary origin and maintenance of individual behavioural variation and behavioural plasticity has increased in recent years. 2. Consistent individual behavioural differences imply limited behavioural plasticity, but the proximate causes and wider consequences of this potential constraint remain poorly understood. To date, few attempts have been made to explore whether individual variation in behavioural plasticity exists, either within or between populations. 3. We assayed ` exploration behaviour' among wild-caught individual great tits Parus major when exposed to a novel environment room in four populations across Europe. We quantified levels of individual variation within and between populations in average behaviour, and in behavioural plasticity with respect to (i) repeated exposure to the room (test sequence), (ii) the time of year in which the assays were conducted and (iii) the interval between successive tests, all of which indicate habituation to novelty and are therefore of functional significance. 4. Consistent individual differences ('I') in behaviour were present in all populations; repeatability (range: 0.34-0.42) did not vary between populations. Exploration behaviour was also plastic, increasing with test sequence - but less so when the interval between subsequent tests was relatively large - and time of year; populations differed in the magnitude of plasticity with respect to time of year and test interval. Finally, the between-individual variance in exploration behaviour increased significantly from first to repeat tests in all populations. Individuals with high initial scores showed greater increases in exploration score than individuals with low initial scores; individual by environment interaction ('I x E') with respect to test sequence did not vary between populations. 5. Our findings imply that individual variation in both average level of behaviour and behavioural plasticity may generally characterize wild great tit populations and may largely be shaped by mechanisms acting within populations. Experimental approaches are now needed to confirm that individual differences in behavioural plasticity (habituation) - not other hidden biological factors caused the observed patterns of I x E. Establishing the evolutionary causes and consequences of this variation in habituation to novelty constitutes an exciting future challenge.
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- 2012
33. Basal metabolic rate and the rate of senescence in the great tit
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Bouwhuis, S, Sheldon, BC, Verhulst, S, and Verhulst lab
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RED SQUIRRELS ,senescence ,uncoupling-to-survive ,life-history ,ENERGY-METABOLISM ,INDIVIDUAL VARIATION ,LONG-TERM REPEATABILITY ,BODY-MASS ,OVER-WINTER SURVIVAL ,wild population ,LIFE ,WILD BIRD POPULATION ,SIZE ,great tit ,ageing ,Parus major ,energy expenditure ,basal metabolic rate ,ZEBRA FINCHES ,rate-of-living - Abstract
1. Between-individual variation in rates of senescence has recently been found to relate to natal and early-life conditions in several natural populations. Mechanistic theories of senescence have predicted between-individual variation in basal metabolic rate (BMR) to also underlie such variation in rates of senescence. The question whether variation in BMR is linked to natal and early-life conditions with effects on senescence has, however, not yet been addressed. 2. Using cross-sectional data on winter BMR of nearly 700 individual great tits Parus major, we tested whether factors associated with individual variation in the rate of senescence were also associated with differences in BMR. 3. We found that winter BMR was a repeatable trait (36%), and that variation in winter BMR was partly explained by body mass, and interactive effects of sex, age and seasonal date with ambient temperature. 4. Our data, however, revealed that neither the level of BMR, nor its age-specific decline, was explained by three parameters previously shown to underlie variation in rates of reproductive senescence in our study population: maternal age, immigrant status and early-life reproductive performance. 5. These results therefore did not support the suggestion that variation in BMR underlies variation in rates of reproductive senescence in relation to maternal age, immigrant status and early-life reproductive performance. 6. We further found a low repeatability of BMR from winter to the subsequent breeding season (1%, n=55), which suggested that a relationship between BMR and proxies for rates of senescence may have been absent in our data set because winter BMR did not represent year-round metabolic strategies. 7. Further study, preferably using longitudinal data, is required to resolve the link between BMR at different times of year and senescence. © 2011 The Authors. Functional Ecology © 2011 British Ecological Society.
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- 2011
34. Similar patterns of age-specific reproduction in an island and mainland population of great tits Parus major
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Sandra Bouwhuis, Arie J. van Noordwijk, Simon Verhulst, Ben C. Sheldon, Marcel E. Visser, Verhulst lab, Beersma lab, and Animal Ecology (AnE)
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FITNESS ,media_common.quotation_subject ,Population ,NATURAL-POPULATION ,INDIVIDUAL VARIATION ,Life history theory ,Gene flow ,GENE FLOW ,QUALITY ,education ,Ecology, Evolution, Behavior and Systematics ,media_common ,Parus ,education.field_of_study ,biology ,Ecology ,biology.organism_classification ,EVOLUTION ,WILD BIRD POPULATION ,Natural population growth ,Ageing ,NATAL DISPERSAL ,SENESCENCE ,Animal Science and Zoology ,Mainland ,LIFE-HISTORY TRAITS ,Reproduction ,Demography - Abstract
The process of ageing was long thought to be too infrequent to affect life-histories in natural populations. Long-term studies have, however, recently demonstrated ageing to be ubiquitous even in the wild, although confounding factors, such as emigration instead of mortality, or inter-population variation in rates of ageing have seldom been addressed. Here, we present analyses of female age-specific reproductive performance in a Dutch island population of great tits Parus major. For this population with limited connectivity to surrounding areas, we show that, between individuals, reproductive lifespan positively co-varies with recruit production, while within individuals performance improves up to 3 years of age, after which it gradually declines. We also show these patterns to be strikingly similar to those recently found in a less isolated British mainland population of great tits, characterised by different environmental conditions and life-history strategies, in particular the frequency of multiple breeding. Our results therefore suggest patterns of age-specific reproductive performance to be robust to both environmental and life-history variation. © 2010 The Authors.
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- 2010
35. Passerine extrapair mating dynamics: a bayesian modeling approach comparing four species
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Thomas Lubjuhn, Amélie N. Dreiss, Balázs Rosivall, Toni Laaksonen, Clotilde Biard, Kees van Oers, Ian R. Hartley, Marco van der Velde, Paula K. Lehtonen, Jussi Alho, Bart Kempenaers, Joost M. Tinbergen, Tomasz Wilk, Anne Charmantier, Samantha C. Patrick, Mårten B. Hjernquist, Joanne R. Chapman, Wolfgang Winkel, Jon E. Brommer, Jan Komdeur, Faculty of Biological and Environmental Sciences [Helsinki], University of Helsinki, Ecologie Systématique et Evolution (ESE), Université Paris-Sud - Paris 11 (UP11)-AgroParisTech-Centre National de la Recherche Scientifique (CNRS), Centre d’Ecologie Fonctionnelle et Evolutive (CEFE), Université Paul-Valéry - Montpellier 3 (UPVM)-Institut National de la Recherche Agronomique (INRA)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-École pratique des hautes études (EPHE), Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD [France-Sud])-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro), Fonctionnement et évolution des systèmes écologiques (FESE), École normale supérieure - Paris (ENS Paris), Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS), Lancaster Environment Centre, Lancaster University, Division of Animal Ecology, Department of Ecology and Evolution, Uppsala University, Department of Behavioural Ecology and Evolutionary Genetics, Max Planck Institute for Ornithology, Max-Planck-Gesellschaft-Max-Planck-Gesellschaft, Animal Ecology Group, University of Groningen [Groningen], Section of Ecology, University of Turku, Section of Genetics, Institute for Evolutionary Biology and Ecology, Rheinische Friedrich-Wilhelms-Universität Bonn, Behavioural Ecology Group, Eötvös Loránd University (ELTE), Univ Groningen, Anim Ecol Grp, Ctr Ecol & Evolutionary Studies, Université de Groningen, Department of Animal Ecology, Institute of Ecology (NIOO-KNAW), Institute of Environmental Sciences, Uniwersytet Jagielloński w Krakowie = Jagiellonian University (UJ), Institute of Avian Research, Institute of Avian Research, Vogelwarte Helgoland, An der Vogelwarte, Animal Population Biology, Animal Ecology (AnE), Institut de Recherche pour le Développement (IRD [France-Sud])-Centre National de la Recherche Scientifique (CNRS)-École pratique des hautes études (EPHE)-Université de Montpellier (UM)-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro)-Institut National de la Recherche Agronomique (INRA)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Université Paul-Valéry - Montpellier 3 (UM3), École normale supérieure - Paris (ENS Paris)-Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS), Jagiellonian University [Krakow] (UJ), Helsingin yliopisto = Helsingfors universitet = University of Helsinki, Université Paul-Valéry - Montpellier 3 (UPVM)-Institut National de la Recherche Agronomique (INRA)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-École Pratique des Hautes Études (EPHE), École normale supérieure - Paris (ENS-PSL), Komdeur lab, and Behavioural & Physiological Ecology
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0106 biological sciences ,Male ,Breeding behavior ,bird ,FAIRY-WRENS ,Population Dynamics ,Paternity ,Poisson distribution ,01 natural sciences ,TITS PARUS-CAERULEUS ,PARENTAL CARE ,MESH: Genotype ,Sexual Behavior, Animal ,Biological evolution ,REPRODUCTIVE SUCCESS ,Mate selection ,Mating system ,MESH: Animals ,Passeriformes ,BLUE TITS ,mate choice ,MESH: Sexual Behavior, Animal ,0303 health sciences ,biology ,Ecology ,Reproduction ,[SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE] ,FICEDULA-HYPOLEUCA ,Passerine ,mating systems ,WILD BIRD POPULATION ,Mate choice ,Sexual selection ,symbols ,Female ,Aves ,Genotype ,MESH: Bayes Theorem ,Zoology ,010603 evolutionary biology ,PAIR PATERNITY ,03 medical and health sciences ,symbols.namesake ,Species Specificity ,promiscuity ,biology.animal ,Animals ,MESH: Species Specificity ,Sperm competition ,Ecology, Evolution, Behavior and Systematics ,030304 developmental biology ,Vertebrata ,Reproductive success ,Dynamics Mating ,Modeling ,MESH: Passeriformes ,Bayes Theorem ,MESH: Population Dynamics ,MESH: Male ,extrapair paternity ,SPERM COMPETITION ,Bayes estimation ,Paternal care ,MESH: Female - Abstract
International audience; In many socially monogamous animals, females engage in extrapair copulation (EPC), causing some broods to contain both within-pair and extrapair young (EPY). The proportion of all young that are EPY varies across populations and species. Because an EPC that does not result in EPY leaves no forensic trace, this variation in the proportion of EPY reflects both variation in the tendency to engage in EPC and variation in the extrapair fertilization (EPF) process across populations and species. We analyzed data on the distribution of EPY in broods of four passerines (blue tit, great tit, collared flycatcher, and pied flycatcher), with 18,564 genotyped nestlings from 2,346 broods in two to nine populations per species. Our Bayesian modeling approach estimated the underlying probability function of EPC (assumed to be a Poisson function) and conditional binomial EPF probability. We used an information theoretical approach to show that the expected distribution of EPC per female varies across populations but that EPF probabilities vary on the above-species level (tits vs. flycatchers). Hence, for these four passerines, our model suggests that the probability of an EPC mainly is determined by ecological (population-specific) conditions, whereas EPF probabilities reflect processes that are fixed above the species level.
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- 2010
36. Predicting demographically sustainable rates of adaptation:Can great tit breeding time keep pace with climate change?
- Author
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Gienapp, Phillip, Lof, Marjolein, Reed, Thomas E., McNamara, John, Verhulst, Simon, Visser, Marcel E., Gienapp, Phillip, Lof, Marjolein, Reed, Thomas E., McNamara, John, Verhulst, Simon, and Visser, Marcel E.
- Abstract
Populations need to adapt to sustained climate change, which requires micro-evolutionary change in the long term. A key question is how the rate of this micro-evolutionary change compares with the rate of environmental change, given that theoretically there is a 'critical rate of environmental change' beyond which increased maladaptation leads to population extinction. Here, we parametrize two closely related models to predict this critical rate using data from a long-term study of great tits (Parus major). We used stochastic dynamic programming to predict changes in optimal breeding time under three different climate scenarios. Using these results we parametrized two theoretical models to predict critical rates. Results from both models agreed qualitatively in that even 'mild' rates of climate change would be close to these critical rates with respect to great tit breeding time, while for scenarios close to the upper limit of IPCC climate projections the calculated critical rates would be clearly exceeded with possible consequences for population persistence. We therefore tentatively conclude that microevolution, together with plasticity, would rescue only the population from mild rates of climate change, although the models make many simplifying assumptions that remain to be tested.
- Published
- 2013
37. Genome-wide SNP detection in the great tit Parus major using high throughput sequencing
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Nikkie E. M. Van Bers, Marcel E. Visser, Martien A. M. Groenen, Kees van Oers, Bert Dibbits, Richard P. M. A. Crooijmans, Hindrik H. D. Kerstens, and Animal Ecology (AnE)
- Subjects
wild bird population ,dna-sequences ,natural-populations ,Sequence analysis ,Sequence assembly ,Biology ,Animal Breeding and Genomics ,Polymorphism, Single Nucleotide ,Genome ,phenotypic plasticity ,DNA sequencing ,passerine bird ,Contig Mapping ,evolution ,Genetics ,Animals ,Fokkerij en Genomica ,Passeriformes ,Zebra finch ,Ecology, Evolution, Behavior and Systematics ,Gene Library ,Parus ,Comparative Genomic Hybridization ,future-directions ,Contig ,Genomics ,Sequence Analysis, DNA ,biology.organism_classification ,linkage map ,genotyping assay ,Evolutionary biology ,climate-change ,WIAS ,Finches ,Sequence Alignment ,Reference genome - Abstract
Identifying genes that underlie ecological traits will open exiting possibilities to study gene-environment interactions in shaping phenotypes and in measuring natural selection on genes. Evolutionary ecology has been pursuing these objectives for decades, but they come into reach now that next generation sequencing technologies have dramatically lowered the costs to obtain the genomic sequence information that is currently lacking for most ecologically important species. Here we describe how we generated over 2 billion basepairs of novel sequence information for an ecological model species, the great tit Parus major. We used over 16 million short sequence reads for the de novo assembly of a reference sequence consisting of 550 000 contigs, covering 2.5% of the genome of the great tit. This reference sequence was used as the scaffold for mapping of the sequence reads, which allowed for the detection of over 20 000 novel single nucleotide polymorphisms. Contigs harbouring 4272 of the single nucleotide polymorphisms could be mapped to a unique location on the recently sequenced zebra finch genome. Of all the great tit contigs, significantly more were mapped to the microchromosomes than to the intermediate and the macrochromosomes of the zebra finch, indicating a higher overall level of sequence conservation on the microchromosomes than on the other types of chromosomes. The large number of great tit contigs that can be aligned to the zebra finch genome shows that this genome provides a valuable framework for large scale genetics, e.g. QTL mapping or whole genome association studies, in passerines.
- Published
- 2010
38. Reduced costs of mixed-species pairings in flycatchers: by-product or female strategy?
- Author
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Franz J. Weissing, Ben C. Sheldon, Thor Veen, Johan Träff, and Weissing group
- Subjects
0106 biological sciences ,Species incompatibility ,SELECTION ,Mate choice ,Ficedula albicollis ,Offspring ,Ficedula flycatchers ,Zoology ,COMPETITION ,CONSPECIFIC SPERM PRECEDENCE ,010603 evolutionary biology ,01 natural sciences ,Paternity analysis ,Zoological sciences ,03 medical and health sciences ,COLLARED FLYCATCHERS ,5. Gender equality ,Hybridisation ,Mating ,Ecology, Evolution, Behavior and Systematics ,SEX-RATIO ,030304 developmental biology ,Genetics ,0303 health sciences ,biology ,Ficedula ,ALBICOLLIS ,biology.organism_classification ,WILD BIRD POPULATION ,PATERNITY ,Animal ecology ,Plumage ,Extra-pair paternity ,Animal Science and Zoology ,Sex ratio ,HYBRIDIZATION - Abstract
Heterospecific matings are generally assumed to be unconditionally disadvantageous due to reduced viability or fertility of hybrid offspring. For female collared flycatchers (Ficedula albicollis) mated to male pied flycatchers (Ficedula hypoleuca), the cost of heterospecific pair formation is reduced due to high levels of conspecific extra-pair paternity and a male-biased offspring sex ratio. In order to investigate whether these cost-reducing mechanisms are the result of female mating strategies, rather than being a by-productof species incompatibilities, we manipulated the plumage of male collared flycatchers before pair formation to make them resemble male pied flycatchers. Since species incompatibilities are absent in this design, any systematic effect of manipulation on sec ratio or paternity would indicate a role of female mating strategy. Paternity was determined by means of a likelihood approach that controls the errors made in assigning a chick to be 'within-pair' or 'extra-pair'. Neither the sex ratio nor the male share of paternity was affected by the manipulation in a systematic manner. We therefore conclude that our experimental data provide no support for the suggestion that female behavioural strategies are markedly adjusted in response to formation of mixed-species pairs.
- Published
- 2009
39. Passerine Extrapair Mating Dynamics:A Bayesian Modeling Approach Comparing Four Species
- Author
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Boughman, Janette, DeAngelis, Donald L., Brommer, Jon E., Alho, Jussi S., Biard, Clotilde, Chapman, Joanne R., Charmantier, Anne, Dreiss, Amelie, Hartley, Ian R., Hjernquist, Marten B., Kempenaers, Bart, Komdeur, Jan, Laaksonen, Toni, Lehtonen, Paula K., Lubjuhn, Thomas, Patrick, Samantha C., Rosivall, Balazs, Tinbergen, Joost M., van der Velde, Marco, van Oers, Kees, Wilk, Tomasz, Winkel, Wolfgang, Hjernquist, Mårten B., Boughman, Janette, DeAngelis, Donald L., Brommer, Jon E., Alho, Jussi S., Biard, Clotilde, Chapman, Joanne R., Charmantier, Anne, Dreiss, Amelie, Hartley, Ian R., Hjernquist, Marten B., Kempenaers, Bart, Komdeur, Jan, Laaksonen, Toni, Lehtonen, Paula K., Lubjuhn, Thomas, Patrick, Samantha C., Rosivall, Balazs, Tinbergen, Joost M., van der Velde, Marco, van Oers, Kees, Wilk, Tomasz, Winkel, Wolfgang, and Hjernquist, Mårten B.
- Abstract
In many socially monogamous animals, females engage in extrapair copulation (EPC), causing some broods to contain both within-pair and extrapair young (EPY). The proportion of all young that are EPY varies across populations and species. Because an EPC that does not result in EPY leaves no forensic trace, this variation in the proportion of EPY reflects both variation in the tendency to engage in EPC and variation in the extrapair fertilization (EPF) process across populations and species. We analyzed data on the distribution of EPY in broods of four passerines (blue tit, great tit, collared flycatcher, and pied flycatcher), with 18,564 genotyped nestlings from 2,346 broods in two to nine populations per species. Our Bayesian modeling approach estimated the underlying probability function of EPC (assumed to be a Poisson function) and conditional binomial EPF probability. We used an information theoretical approach to show that the expected distribution of EPC per female varies across populations but that EPF probabilities vary on the above-species level (tits vs. flycatchers). Hence, for these four passerines, our model suggests that the probability of an EPC mainly is determined by ecological (population-specific) conditions, whereas EPF probabilities reflect processes that are fixed above the species level.
- Published
- 2010
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