89 results on '"van Gelder, B F"'
Search Results
2. Properties of protease-treated cytochrome c oxidase from beef heart
- Author
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Boonman, J. C. P., van Beek, G. G. M., Muijsers, A. O., and van Gelder, B. F.
- Published
- 1979
- Full Text
- View/download PDF
3. Effect of ligands on cytochromed fromAzotobacter vinelandii
- Author
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Kauffman, H. F., van Gelder, B. F., and DerVartanian, D. V.
- Published
- 1980
- Full Text
- View/download PDF
4. Evidence for the presence of di- and triphospho pyridine nucleotide dehydrogenase derivatives as consistent contaminants of purified beef heart cytochrome-c oxidase
- Author
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Penniall, Ralph, Elliott, W. B., van Buuren, K. J. H., and van Gelder, B. F.
- Published
- 1976
- Full Text
- View/download PDF
5. Presteady-state and steady-state kinetic properties of human cytochrome c oxidase. Identification of rate-limiting steps in mammalian cytochrome c oxidase
- Author
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van Kuilenburg, A. B., Gorren, A. C., Dekker, H. L., Nieboer, P., van Gelder, B. F., Muijsers, A. O., and Other departments
- Abstract
Human cytochrome c oxidase was purified in a fully active form from heart and skeletal muscle. The enzyme was selectively solubilised with octylglucoside and KCl from submitochondrial particles followed by ammonium sulphate fractionation. The presteady-state and steady-state kinetic properties of the human cytochrome c oxidase preparations with either human cytochrome c or horse cytochrome c were studied spectrophotometrically and compared with those of bovine heart cytochrome c oxidase. The interaction between human cytochrome c and human cytochrome c oxidase proved to be highly specific. It is proposed that for efficient electron transfer to occur, a conformational change in the complex is required, thereby shifting the initially unfavourable redox equilibrium. The very slow presteady-state reaction between human cytochrome c oxidase and horse cytochrome c suggests that, in this case, the conformational change does not occur. The proposed model was also used to explain the steady-state kinetic parameters under various conditions. At high ionic strength (I = 200 mM, pH 7.4), the kcat was highly dependent on the type of oxidase and it is proposed that the internal electron transfer is the rate-limiting step. The kcat value of the 'high-affinity' phase, observed at low ionic strength (I = 18 mM, pH 7.4), was determined by the cytochrome c/cytochrome c oxidase combination applied, whereas the Km was highly dependent only on the type of cytochrome c used. Our results suggest that, depending on the cytochrome c/cytochrome c oxidase combination, either the dissociation of ferricytochrome c or the internal electron transfer is the rate-limiting step in the 'high-affinity' phase at low ionic strength. The 'low-affinity' kcat value was not only determined by the type of oxidase used, but also by the type of cytochrome c. It is proposed that the internal electron-transfer rate of the 'low-affinity' reaction is enhanced by the binding of a second molecule of cytochrome c
- Published
- 1992
6. Isoforms of human cytochrome-c oxidase. Subunit composition and steady-state kinetic properties
- Author
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van Kuilenburg, A. B., Dekker, H. L., van den Bogert, C., Nieboer, P., van Gelder, B. F., Muijsers, A. O., and Other departments
- Abstract
The subunit pattern and the steady-state kinetics of cytochrome-c oxidase from human heart, muscle, kidney and liver were investigated. Polyacrylamide gel electrophoresis of immunopurified cytochrome-c oxidase preparations suggest that isoforms of subunit VIa exist, which show differences in staining intensity and electrophoretic mobility. No differences in subunit pattern were observed between the other nucleus-encoded subunits of the various cytochrome-c oxidase preparations. Tissue homogenates, in which cytochrome-c oxidase was solubilised with laurylmaltoside, were directly used in the assays to study the cytochrome-c oxidase steady-state kinetics. Cytochrome-c oxidase concentrations were determined by immunopurification followed by separation and densitometric analysis of subunit IV. When studied in a medium of low ionic strength, the biphasic kinetics of the steady-state reaction between human ferrocytochrome c and the four human cytochrome-c oxidase preparations revealed large differences for the low-affinity TNmax (maximal turnover number) value, ranging from 77 s-1 for kidney to 273 s-1 for liver cytochrome-c oxidase at pH 7.4, I = 18 mM. It is proposed that the low-affinity kinetic phase reflects an internal electron-transfer step. For the steady-state reaction of human heart cytochrome-c oxidase with human cytochrome c, Km and TNmax values of 9 microM and 114 s-1 were found, respectively, at high ionic strength (I = 200 mM, pH 7.4). Only minor differences were observed in the steady-state activity of the various human cytochrome-c oxidases. The interaction between human cytochrome-c oxidase and human cytochrome-c proved to be highly specific. At high ionic strength, a large decrease in steady-state activity was observed when reduced horse, rat or bovine cytochrome c was used as substrate. Both the steady-state TNmax and Km parameters were strongly affected by the type of cytochrome c used. Our findings emphasize the importance of using human cytochrome c in kinetic assays performed with tissues from patients with a suspected cytochrome-c oxidase deficiency
- Published
- 1991
7. The presteady state reaction of chemically modified cytochromes c with cytochrome oxidase.
- Author
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Veerman, E C, Wilms, J, Dekker, H L, Muijsers, A O, van Buuren, K J, van Gelder, B F, Osheroff, N, Speck, S H, and Margoliash, E
- Published
- 1983
- Full Text
- View/download PDF
8. Electron paramagnetic resonance of heme at intermediate oxidation states of cytochrome c oxidase.
- Author
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Van Gelder, B F, Orme-Johnson, W H, Hansen, R E, and Beinert, H
- Published
- 1967
- Full Text
- View/download PDF
9. Inhibition of pig kidney diamine oxidase by nazlinin and nazlinin derivatives.
- Author
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Cheng E, Dekker HL, van Gelder BF, and Koomen GJ
- Subjects
- Amine Oxidase (Copper-Containing) metabolism, Animals, Carbolines chemistry, Dose-Response Relationship, Drug, Kinetics, Swine, Amine Oxidase (Copper-Containing) antagonists & inhibitors, Carbolines pharmacology, Enzyme Inhibitors pharmacology, Kidney enzymology
- Abstract
Nazlinin (1-(4-butylamino)-1,2,3,4-tetrahydro-beta-carboline) (1), an alkaloid recently isolated from Nitraria schoberi, and its two derivatives, 1-(4-butylamino)-3,4-dihydro-beta-carboline (2) and 1-(4-butylamino)-beta-carboline (3), were synthesized and their interaction with pig kidney diamine oxidase (PKDO) was studied. Nazlinin appeared to be a very poor substrate while 3 was a good substrate with an apparent Km of 9.3-10(-5) M. The enzyme was inhibited by 1 and 2. With both compounds the mode of inhibition found was non-competitive and inhibition constants calculated from the slopes and intercepts of double-reciprocal plots show that 2 is a much more potent inhibitor than the natural product. The relationship between the structure of these compounds and the results found is discussed.
- Published
- 1995
- Full Text
- View/download PDF
10. A comparison of three preparations of cytochrome c oxidase. Optical absorbance spectra, EPR spectra and reaction towards ligands.
- Author
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Lodder AL and van Gelder BF
- Subjects
- Carbon Monoxide metabolism, Copper metabolism, Cyanides metabolism, Cytochrome a Group metabolism, Electron Transport Complex IV isolation & purification, Formates pharmacology, Kinetics, Oxidation-Reduction, Electron Spin Resonance Spectroscopy, Electron Transport Complex IV chemistry, Electron Transport Complex IV metabolism, Spectrophotometry
- Abstract
Three preparations of cytochrome c oxidase, the preparation as traditionally prepared in our laboratory as described by Van Buuren (1992; PhD Thesis, University of Amsterdam), a preparation according to Volpe and Caughey (Biochem. Biophys. Res. Commun. 61 (1974) 502-509) and a preparation of 'fast' cytochrome c oxidase (Brandt, U., Schägger, H. and Von Jagow, G. (1989) Eur. J. Biochem. 182, 705-711), are compared in their reaction with cyanide and carbon monoxide. The reaction with cyanide is nearly as fast for the Van Buuren preparation as for the 'fast' preparation, but much slower for the Volpe-Caughey preparation. Mixed-valence cytochrome c oxidase (cytochrome a3 and CuB reduced with carbon monoxide bound and cytochrome a and CuA oxidized) is prepared by anaerobic incubation with carbon monoxide. With the Van Buuren preparation complete formation of the species takes 4 h, whereas with the Volpe-Caughey preparation it takes 20 h. Longer incubation under CO results in partial reduction of cytochrome a and CuA. With the 'fast' preparation mixed-valence cytochrome c oxidase is formed after more than one day of incubation with CO, but it is stable for at least 3 days. The presence of oxidized cytochrome c did enhance the reactivity towards cyanide and towards carbon monoxide in cytochrome c oxidase of all three preparations. Furthermore, optical and EPR spectra of the preparations of cytochrome c oxidase are compared. The Volpe-Caughey preparation has an intense g' = 12 EPR-signal, the Van Buuren preparation has hardly any g' = 12 signal and the 'fast' preparation has no g' = 12 signal. In the 'fast' preparation the low-spin heme signal is shifted (from g = 3.00 to g = 2.97). The absorbance spectra of the three preparations in the Soret region are similar with a maximum at 424 nm. Only the 'fast' preparation as isolated was completely oxidized, whereas the other preparations were partially reduced. It was concluded that differences in the reaction of cytochrome c oxidase with ligands are determined by the internal or external ligand bound to the cytochrome a3-CuB couple.
- Published
- 1994
- Full Text
- View/download PDF
11. Effects of cytochrome c on the oxidation of reduced cytochrome c oxidase by hydrogen peroxide.
- Author
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Lodder AL, Wever R, and van Gelder BF
- Subjects
- Copper, Electron Transport, Oxidation-Reduction, Cytochrome c Group chemistry, Electron Transport Complex IV chemistry, Hydrogen Peroxide chemistry
- Abstract
The oxidation of the redox centres in reduced cytochrome c oxidase by hydrogen peroxide was studied by stopped-flow spectrophotometry in the absence and presence of reduced cytochrome c. The oxidation rate of cytochrome a decreased in the presence of cytochrome c. This effect was more pronounced at low than at high ionic strength. Cytochrome c did not influence the time-course of the oxidation of CuA or cytochrome a3. The oxidation of cytochrome c itself was faster at low ionic strength. The results suggest that the effect of cytochrome c is caused by re-reduction of cytochrome a by cytochrome c, the rate of which is dependent upon the ionic strength. We conclude that cytochrome a and cytochrome c are in equilibrium and that the equilibrium constant depends on the ionic strength. At low ionic strength, as a complex is formed between cytochrome c and cytochrome c oxidase, cytochrome a is more reduced than at high ionic strength conditions, when no such complex exists. Since CuA is oxidized at the same rate whether cytochrome c is present or not, we conclude that electron transfer from cytochrome a or cytochrome c to CuA is slower than electron transfer from CuA to cytochrome a or/and to the cytochrome a2-CuB couple.
- Published
- 1994
- Full Text
- View/download PDF
12. Presteady-state and steady-state kinetic properties of human cytochrome c oxidase. Identification of rate-limiting steps in mammalian cytochrome c oxidase.
- Author
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Van Kuilenburg AB, Gorren AC, Dekker HL, Nieboer P, Van Gelder BF, and Muijsers AO
- Subjects
- Animals, Cattle, Cytochrome c Group metabolism, Electrophoresis, Polyacrylamide Gel, Horses, Humans, Kinetics, Osmolar Concentration, Protein Conformation, Electron Transport Complex IV metabolism
- Abstract
Human cytochrome c oxidase was purified in a fully active form from heart and skeletal muscle. The enzyme was selectively solubilised with octylglucoside and KCl from submitochondrial particles followed by ammonium sulphate fractionation. The presteady-state and steady-state kinetic properties of the human cytochrome c oxidase preparations with either human cytochrome c or horse cytochrome c were studied spectrophotometrically and compared with those of bovine heart cytochrome c oxidase. The interaction between human cytochrome c and human cytochrome c oxidase proved to be highly specific. It is proposed that for efficient electron transfer to occur, a conformational change in the complex is required, thereby shifting the initially unfavourable redox equilibrium. The very slow presteady-state reaction between human cytochrome c oxidase and horse cytochrome c suggests that, in this case, the conformational change does not occur. The proposed model was also used to explain the steady-state kinetic parameters under various conditions. At high ionic strength (I = 200 mM, pH 7.4), the kcat was highly dependent on the type of oxidase and it is proposed that the internal electron transfer is the rate-limiting step. The kcat value of the 'high-affinity' phase, observed at low ionic strength (I = 18 mM, pH 7.4), was determined by the cytochrome c/cytochrome c oxidase combination applied, whereas the Km was highly dependent only on the type of cytochrome c used. Our results suggest that, depending on the cytochrome c/cytochrome c oxidase combination, either the dissociation of ferricytochrome c or the internal electron transfer is the rate-limiting step in the 'high-affinity' phase at low ionic strength. The 'low-affinity' kcat value was not only determined by the type of oxidase used, but also by the type of cytochrome c. It is proposed that the internal electron-transfer rate of the 'low-affinity' reaction is enhanced by the binding of a second molecule of cytochrome c.
- Published
- 1992
- Full Text
- View/download PDF
13. Human hemi-myeloperoxidase. Initial chlorinating activity at neutral pH, compound II and III formation, and stability towards hypochlorous acid and high temperature.
- Author
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Zuurbier KW, van den Berg JD, Van Gelder BF, and Muijsers AO
- Subjects
- Enzyme Stability, Hot Temperature, Humans, Hydrogen Peroxide metabolism, Hydrogen-Ion Concentration, Kinetics, Macromolecular Substances, Peroxidase isolation & purification, Spectrophotometry, Thermodynamics, Chlorides metabolism, Hypochlorous Acid metabolism, Leukocytes enzymology, Peroxidase blood
- Abstract
Human neutrophilic myeloperoxidase (MPO) is involved in the defence mechanism of the body against micro-organisms. The enzyme catalyses the generation of the strong oxidant hypochlorous acid (HOCl) from hydrogen peroxide and chloride ions. In normal neutrophils MPO is present in the dimeric form (140 kDa). The disulphide-linked protomers each consist of a heavy subunit and a light one. Reductive alkylation converts the dimeric enzyme into two promoters, 'hemi-myeloperoxidase'. We studied the initial activities of human dimeric MPO and hemi-MPO at the physiological pH of 7.2 and found no significant differences in chlorinating activity. These results indicate that, at least at neutral pH, the protomers of MPO function independently. The absorption spectra of MPO compounds II and III, both inactive forms concerning HOCl generation, and the rate constants of their formation were the same for dimeric MPO and hemi-MPO, but hemi-MPO required a slightly larger excess of H2O2 for complete conversion. Hemi-MPO was less stable at a high temperature (80 degrees C) as compared to the dimeric enzyme. Furthermore, the resistance of the chlorinating activity of hemi-MPO against its oxidative product hypochlorous acid was somewhat lower (IC50 = 32 microM HOCl) compared to dimeric MPO (IC50 = 50 microM HOCl). The higher stability of dimeric MPO in the presence of its oxidative product compared to that of monomeric MPO might be the reason for the occurrence of MPO as a dimer.
- Published
- 1992
- Full Text
- View/download PDF
14. Isoforms of human cytochrome-c oxidase. Subunit composition and steady-state kinetic properties.
- Author
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Van Kuilenburg AB, Dekker HL, Van den Bogert C, Nieboer P, Van Gelder BF, and Muijsers AO
- Subjects
- Animals, Electron Transport Complex IV isolation & purification, Humans, Immune Sera, Isoenzymes isolation & purification, Kinetics, Macromolecular Substances, Molecular Weight, Organ Specificity, Electron Transport Complex IV metabolism, Isoenzymes metabolism, Kidney enzymology, Liver enzymology, Muscles enzymology, Myocardium enzymology
- Abstract
The subunit pattern and the steady-state kinetics of cytochrome-c oxidase from human heart, muscle, kidney and liver were investigated. Polyacrylamide gel electrophoresis of immunopurified cytochrome-c oxidase preparations suggest that isoforms of subunit VIa exist, which show differences in staining intensity and electrophoretic mobility. No differences in subunit pattern were observed between the other nucleus-encoded subunits of the various cytochrome-c oxidase preparations. Tissue homogenates, in which cytochrome-c oxidase was solubilised with laurylmaltoside, were directly used in the assays to study the cytochrome-c oxidase steady-state kinetics. Cytochrome-c oxidase concentrations were determined by immunopurification followed by separation and densitometric analysis of subunit IV. When studied in a medium of low ionic strength, the biphasic kinetics of the steady-state reaction between human ferrocytochrome c and the four human cytochrome-c oxidase preparations revealed large differences for the low-affinity TNmax (maximal turnover number) value, ranging from 77 s-1 for kidney to 273 s-1 for liver cytochrome-c oxidase at pH 7.4, I = 18 mM. It is proposed that the low-affinity kinetic phase reflects an internal electron-transfer step. For the steady-state reaction of human heart cytochrome-c oxidase with human cytochrome c, Km and TNmax values of 9 microM and 114 s-1 were found, respectively, at high ionic strength (I = 200 mM, pH 7.4). Only minor differences were observed in the steady-state activity of the various human cytochrome-c oxidases. The interaction between human cytochrome-c oxidase and human cytochrome-c proved to be highly specific. At high ionic strength, a large decrease in steady-state activity was observed when reduced horse, rat or bovine cytochrome c was used as substrate. Both the steady-state TNmax and Km parameters were strongly affected by the type of cytochrome c used. Our findings emphasize the importance of using human cytochrome c in kinetic assays performed with tissues from patients with a suspected cytochrome-c oxidase deficiency.
- Published
- 1991
- Full Text
- View/download PDF
15. The effect of pH and ionic strength on the steady-state activity of isolated cytochrome C oxidase.
- Author
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Wilms J, van Rijn JL, and Van Gelder BF
- Subjects
- Cytochrome c Group metabolism, Hydrogen-Ion Concentration, Kinetics, Osmolar Concentration, Oxidation-Reduction, Electron Transport Complex IV metabolism
- Abstract
1. The turnover number and apparent Km of isolated beef-heart cytochrome c oxidase were found to increase continuously when the pH was lowered from 8.6 to 4.6 (turnover number 32-630 s-1). In this pH range neither irreversible denaturation of the enzyme nor an optimum for the turnover number was observed. 2. The turnover number of cytochrome c oxidase was found to be independent of ionic strength. It was concluded that the dependence of the activity of cytochrome c oxidase on ionic strength is caused by a change in the value of Km for cytochrome c. 3. The pH dependence of the turnover number of cytochrome c oxidase can be described by a simple model in which at least three sites on the complex of cytochrome c oxidase with cytochrome c (pKa 8.0, 6.5 and 4.8) can take up a proton.
- Published
- 1980
- Full Text
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16. The photoreactivity of the copper-NO complexes in cytochrome c oxidase and in other copper-containing proteins.
- Author
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Wever R, Boelens R, De Boer E, Van Gelder BF, Gorren AC, and Rademaker H
- Subjects
- Animals, Ascorbate Oxidase metabolism, Cattle, Ceruloplasmin metabolism, Electron Spin Resonance Spectroscopy, Electron Transport Complex IV radiation effects, Hemocyanins metabolism, Myocardium enzymology, Photochemistry, Copper metabolism, Electron Transport Complex IV metabolism, Light, Nitric Oxide metabolism
- Abstract
The complexes of NO with CuB of cytochrome c oxidase in which cytochrome a3 may or may not be ligated to cyanide or fluoride are photodissociable. NO does not appear to react with CuB in complexes of cytochrome c oxidase in which sulphide or mercaptans are ligated to the haem iron of cytochrome a3. A comparison is made between the photoreactivity of the complexes of NO with cytochrome c oxidase and those with ceruloplasmin, ascorbate oxidase, and haemocyanin. It is shown that the photoreactivity of CuB 2+.NO in cytochrome c oxidase is not unique for this enzyme, but may also be observed in the complexes of NO with type-1 copper-containing enzymes. This would suggest that the ligation of CuB in cytochrome c oxidase shows some similarity to type-1 copper in blue oxidases.
- Published
- 1985
- Full Text
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17. The reactivity of thiol groups in bovine heart cytochrome c oxidase towards 5,5'-dithiobis(2-nitrobenzoic acid).
- Author
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Verheul FE, Draijer JW, Muijsers AO, and Van Gelder BF
- Subjects
- Amino Acid Sequence, Amino Acids analysis, Animals, Binding Sites, Cattle, Cysteine analysis, Kinetics, Protein Binding, Sulfhydryl Compounds analysis, Dithionitrobenzoic Acid pharmacology, Electron Transport Complex IV metabolism, Myocardium enzymology, Nitrobenzoates pharmacology
- Abstract
Bovine heart cytochrome c oxidase consists of 12 stoicheiometric polypeptide chains of at least 11 different types. The enzyme contains 14--16 cysteine residues; the distribution of nearly all cysteine residues over the subunits has been established. In native cytochrome c oxidase two thiol groups reacted rapidly and stoicheiometrically with 5,5'-dithiobis(2-nitrobenzoic acid) (DTNB). These thiol groups are located in subunits I and III, respectively. This implies that subunit I is not fully buried in the hydrophobic core of the enzyme. After dissociation of the enzyme by sodium dodecyl sulphate more thiol groups became available to DTNB, in addition to those in subunits I and III, at least one in subunit II, two in fraction V/VI and one to two in the smallest subunit fraction. It is shown that separation of the subunits of cytochrome c oxidase by gel permeation chromatography in the presence of sodium dodecyl sulphate depends on the pH of the elution medium. The elution volume of subunits I, III and VII is dependent on pH, that of the others independent.
- Published
- 1982
- Full Text
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18. Electron transfer after flash photolysis of mixed-valence carboxycytochrome c oxidase.
- Author
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Boelens R, Wever R, and Van Gelder BF
- Subjects
- Animals, Cattle, Electron Transport, Kinetics, Myocardium enzymology, Oxidation-Reduction, Photolysis, Electron Transport Complex IV metabolism
- Abstract
The light-induced difference spectra of the fully reduced (a2+ a23+-CO) complex and the mixed-valence carboxycytochrome c oxidase (a3+ a23+-CO) during steady-state illumination and after flash photolysis showed marked differences. The differences appear to be due to electron transfer between the redox centres in the enzyme. The product of the absorbance coefficient and the quantum yield was found to be equal in both enzyme species, both when determined from the rates of photolysis and from the values of the dissociation constants of the cytochrome a23+-CO complex. This would confirm that the spectral properties of cytochrome a3 are not affected by the redox state of cytochrome a and CuA. When the absorbance changes after photolysis of cytochrome a23+-CO with a laser flash were followed on a time scale from 1 mus to 1 s in the fully reduced carboxycytochrome c oxidase, only the CO recombination reaction was observed. However, in the mixed-valence enzyme an additional fast absorbance change (k = 7 X 10(3) s-1) was detected. The kinetic difference spectrum of this fast change showed a peak at 415 nm and a trough at 445 nm, corresponding to oxidation of cytochrome a3. Concomitantly, a decrease of the 830 nm band was observed due to reduction of CuA. This demonstrates that in the partially reduced enzyme a pathway is present between CuA and the cytochrome a3-CuB pair, via which electrons are transferred rapidly.
- Published
- 1982
- Full Text
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19. Effects of ATP, antimycin and cyanide on the EPR spectra of cytochromes in phosphorylating submitochondrial particles.
- Author
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Dervartanian DV, Lee IY, Slater EC, and van Gelder BF
- Subjects
- Adenosine Triphosphate metabolism, Binding Sites, Cytochrome c Group, Electron Spin Resonance Spectroscopy, Electron Transport Complex IV metabolism, Magnesium metabolism, Mitochondria, Muscle drug effects, Myocardium, Organoids drug effects, Organoids enzymology, Protein Binding, Protein Conformation, Adenosine Triphosphate pharmacology, Antimycin A pharmacology, Cyanides pharmacology, Cytochromes metabolism, Mitochondria, Muscle enzymology, Oxidative Phosphorylation drug effects
- Published
- 1974
- Full Text
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20. Biochemical and biophysical studies on cytochrome c oxidase. XVIII. Potentiometric titrations of cytochrome c oxidase followed by circular dichroism.
- Author
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Tiesjema RH, Hardy GP, and van Gelder BF
- Subjects
- Animals, Binding Sites, Cattle, Circular Dichroism, Cytochrome c Group, Horses, Hydrogen-Ion Concentration, Kinetics, Ligands, Mathematics, Myocardium enzymology, Oxidation-Reduction, Potentiometry, Protein Binding, Protein Conformation, Species Specificity, Spectrophotometry, Electron Transport Complex IV
- Published
- 1974
- Full Text
- View/download PDF
21. The effect of pH and ionic strength on the pre-steady-state reaction of cytochrome c and cytochrome aa3.
- Author
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Wilms J, Dekker HL, Boelens R, and van Gelder BF
- Subjects
- Animals, Cattle, Myocardium enzymology, Osmolar Concentration, Phenolsulfonphthalein pharmacology, Cytochrome c Group metabolism, Electron Transport Complex IV metabolism, Hydrogen-Ion Concentration
- Abstract
(1) In the pH range between 5.0 and 8.0, the rate constants for the reaction of ferrocytochrome c with both the high- and low-affinity sites on the cytochrome aa3 increased by a factor of approx. 2 per pH unit. (2) The pre-steady-state reaction between ferrocytochrome c and cytochrome aa3 did nt cause a change in the pH of an unbuffered medium. Furthermore, it was found that this reaction and the steady-state reaction are equally fast in H2O and 2H2O. From these results it was concluded that no protons are directly involved in a rate-determining reaction step. (3) Arrhenius plots show that the reaction between ferrocytochrome c and cytochrome aa3 requires a higher enthalpy of activation at temperatures below 20 degrees C (15--16 kcal/mol) as compared to that at higher temperature (9 kcal/mol). We found no effect of ionic strength on the activation enthalpy of the pre-steady-state reaction, nor on that of the steady-state reaction. This suggests that ionic strength does not change the character of these reactions, but merely affects the electrostatic interaction between both cytochromes.
- Published
- 1981
- Full Text
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22. Biochemical and biophysical studies on cytochrome c oxidase. XIX. An EPR study of the photodissociation of carboxycytochrome c oxidase in the presence of azide.
- Author
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Wever R and van Gelder BF
- Subjects
- Animals, Azides, Binding Sites, Carbon Monoxide, Cattle, Cyanides, Cytochrome c Group, Darkness, Electron Spin Resonance Spectroscopy, Kinetics, Light, Myocardium enzymology, Photochemistry, Protein Binding, Protein Conformation, Electron Transport Complex IV metabolism
- Published
- 1974
- Full Text
- View/download PDF
23. The reaction between cytochrome c1 and cytochrome c.
- Author
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König BW, Wilms J, and Van Gelder BF
- Subjects
- Animals, Cattle, Chlorides pharmacology, Electron Transport drug effects, Horses, Kinetics, Morpholines pharmacology, Osmolar Concentration, Phosphates pharmacology, Spectrophotometry, Cytochrome c Group analogs & derivatives, Cytochrome c Group metabolism, Cytochromes c1 metabolism
- Abstract
The kinetics of electron transfer between the isolated enzymes of cytochrome c1 and cytochrome c have been investigated using the stopped-flow technique. The reaction between ferrocytochrome c1 and ferricytochrome c is fast; the second-order rate constant (k1) is 3.0 . 10(7) M-1 . s-1 at low ionic strength (I = 223 mM, 10 degrees C). The value of this rate constant decreases to 1.8 . 10(5) M-1 . s-1 upon increasing the ionic strength to 1.13 M. The ionic strength dependence of the electron transfer between cytochrome c1 and cytochrome c implies the involvement of electrostatic interactions in the reaction between both cytochromes. In addition to a general influence of ionic strength, specific anion effects are found for phosphate, chloride and morpholinosulphonate. These anions appear to inhibit the reaction between cytochrome c1 and cytochrome c by binding of these anions to the cytochrome c molecule. Such a phenomenon is not observed for cacodylate. At an ionic strength of 1.02 M, the second-order rate constants for the reaction between ferrocytochrome c1 and ferricytochrome c and the reverse reaction are k1 = 2.4 . 10(5) M-1 . s-1 and k-1 = 3.3 . 10(5) M-1 . s-1, respectively (450 mM potassium phosphate, pH 7.0, 1% Tween 20, 10 degrees C). The 'equilibrium' constant calculated from the rate constants (0.73) is equal to the constant determined from equilibrium studies. Moreover, it is shown that at this ionic strength, the concentrations of intermediary complexes are very low and that the value of the equilibrium constant is independent of ionic strength. These data can be fitted into the following simple reaction scheme: cytochrome c2+1 + cytochrome c3+ in equilibrium or formed from cytochrome c3+1 + cytochrome c2+.
- Published
- 1981
- Full Text
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24. Biochemical and biophysical studies on cytochrome c oxidase. XVII. An epr study of the photodissociation of cytochrome a32+-CO.
- Author
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Wever R, van Drooge JH, van Ark G, and van Gelder BF
- Subjects
- Binding Sites, Carbon Monoxide, Copper, Cytochrome c Group, Electron Spin Resonance Spectroscopy, Ferricyanides, Freezing, Light, Myocardium enzymology, Oxidation-Reduction, Oxygen, Photochemistry, Protein Binding, Protein Conformation, Spectrophotometry, Spectrophotometry, Ultraviolet, Temperature, Electron Transport Complex IV
- Published
- 1974
- Full Text
- View/download PDF
25. The absorbance coefficient of beef heart cytochrome c1.
- Author
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Tervoort MJ, Schilder LT, and Van Gelder BF
- Subjects
- Animals, Cattle, Cytochrome c Group metabolism, Cytochromes analysis, Dithionite pharmacology, Ferricyanides pharmacology, Heme analogs & derivatives, Heme metabolism, Kinetics, Methylphenazonium Methosulfate pharmacology, NAD pharmacology, Oxidation-Reduction, Spectrophotometry, Cytochrome c Group analogs & derivatives, Cytochromes c1 metabolism
- Abstract
Isolated cytochrome c1 contains endogenous reducing equivalents. They can be removed by treating the protein with sodium dithionite followed by chromatography. This treatment has no effect on the reaction with cytochrome c, nor does it alter the optical spectrum, or the polypeptide or amino acid composition of the protein. Both the titration of dithionite-treated ferrocytochrome c1 with potassium ferricyanide and the anaerobic titration of dithionite-treated ferricytochrome c1 with NADH in the presence of phenazine methosulphate lead to the same value for the absorbance coefficient of cytochrome c1: 19.2 mM-1 . cm-1 at 552.4 nm for the reduced-minus-oxidised form. This value was also obtained when the haem content was determined by comparing the spectra of the reduced pyridine haemochromes of cytochrome c and cytochrome c1. Comparison of the optical spectra of cytochrome c and cytochrome c1 by integration shows equal transition moments for the transitions in the porphyrin systems of both proteins. A set of equations with which the concentration of the cytochromes aa3, b, c and c1 can be calculated from one reduced-minus-oxidised difference spectrum of a mixture of these proteins.
- Published
- 1981
- Full Text
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26. Characterization of the respiratory nitrate reductase of Klebsiella aerogenes as a molybdenum-containing iron-sulfur enzyme.
- Author
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van Riet J, van Ed JH, Wever R, van Gelder BF, and Planta RJ
- Subjects
- Binding Sites, Disulfides analysis, Electron Spin Resonance Spectroscopy, Iron analysis, Kinetics, Metalloproteins analysis, Microwaves, Molybdenum analysis, Nitrate Reductases antagonists & inhibitors, Protein Binding, Protein Conformation, Sulfhydryl Compounds pharmacology, Sulfur analysis, Klebsiella enzymology, Nitrate Reductases analysis
- Abstract
1. In respiratory nitrate reductase I of Klebsiella aerogenes, 0.24 atom of molybdenum, eight iron-sulfur groups and four tightly bound, non-heme iron atoms per molecule of enzyme (Mr 260 000) are found. 2. EPR spectra at 83 degrees K of oxidized and reduced nitrate reductase I show complex lines at g = 2.02 and g = 1.98, which are more intense in the reduced than in the oxidized enzyme. The resonances, the shape and intensity of which are rather temperature insensitive, are attributed to two species of paramagnetic molybdenum. In dithionite-reduced enzyme all these lines are saturated at the same microwave power of 15 mW. This is not the case in oxidized enzyme, where the resonance at g = 2.02 is hard to saturate. Addition of nitrate to dithionite-reduced reductase I decreases the intensity of the EPR lines to about that of oxidized enzyme. The participation of molybdenum in the electron transfer process has been discussed. 3. At 18 degrees K the oxidized enzyme exhibits an axial-symmetrical signal with g parallel = 2.10 and g = 2.03, and a signal with unknown symmetry at g = 2.015. Upon reduction by dithionite, a ferredoxin type of signal is observed with g values at 2.05, 1.95 and 1.88, while the g = 2.015 signal disappears. Reoxidation by nitrate causes a concomitant disappearance of the ferredoxin type of signal and reappearance of the g = 2.015 signal; hence iron-sulfur centres participate in the transfer of electrons to nitrate. 4. Nitrate reductase II, containing only two (Mr 117 000 and 57 000) of the three subunits found in nitrate reductase I and lacking the tightly bound iron, does not exhibit the axial-symmetrical signal (g = 2.10 and 2.03). Thus, it suggested that this signal in nitrate reductase I stems from an iron centre in the low-molecular weight subunit (Mr 52 000). 5. Inhibition studies confirm the participation of metals in the transfer of electrons from reduced benzylviologen to nitrate and show that the binding sites for these substrates are different.
- Published
- 1975
- Full Text
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27. Photodissociation of cytochrome c oxidase-nitric oxide complexes.
- Author
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Gorren AC, Van Gelder BF, and Wever R
- Subjects
- Carbon Monoxide metabolism, Darkness, Dithionite pharmacology, Electron Transport Complex IV radiation effects, Light, Oxidation-Reduction, Photolysis, Spectrophotometry methods, Electron Transport Complex IV metabolism, Nitric Oxide metabolism
- Abstract
The dissociation of cytochrome c oxidase-nitric oxide complexes was studied by optical spectroscopy at cryogenic temperatures (15 degrees K). With the reduced cytochrome c oxidase-nitric oxide complex, the observations that were reported by Yoshida et al. were confirmed. Photodissociation of the oxidized cytochrome c oxidase-nitric oxide complex did not induce any significant absorbance changes between 350 and 875 nm. With the azide-nitrosyl-cytochrome c oxidase complex, the illumination caused the dissociation of the a2+(3).NO complex to the unligated state a2+(3). Increasing the temperature to 77 degrees K led to the formation of a new complex, probably a3+(3).N3-. The N3(-)-NO-cytochrome c oxidase complex was the only compound for which appreciable photodissociation was achieved by continuous illumination at room temperature (20 degrees C). The effect of illumination was biphasic. In the first phase the a2+(3).NO complex is dissociated and cytochrome a3 oxidized by an electron transfer to CuB. In the second phase nitric oxide, which is still bound to CuB after the first phase, is expelled from the complex by azide, with a concomitant electron transfer from CuB to cytochrome a.
- Published
- 1988
- Full Text
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28. The reduction of porphyrin cytochrome c by hydrated electrons and the subsequent electron transfer reaction from reduced porphyrin cytochrome c to ferricytochrome c.
- Author
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de Kok J, Butler J, Braams R, and van Gelder BF
- Subjects
- Animals, Electric Conductivity, Electron Transport, Electrons, Horses, Myocardium, Osmolar Concentration, Oxidation-Reduction, Cytochrome c Group metabolism
- Abstract
1. Hydrated electrons, produced by pulse radiolysis react with porphyrin cytochrome c with a bimolecular rate constant of 3-10(10) M-1 S-1 at 21 degrees C and pH 7.4. 2. After the reduction step an absorbance change with a half-life of 5 microns is observed with the spectral range of 430-470 nm. A relatively stable intermediate then decays with a half-life of 15 s. 3. The spectrum of the intermediate observed 50 microns after the generation of hydrated electrons shows a broad absorption band between 600 and 700 nm and a peak at 408 nm. The spectrum is attributed to the protonated form of an initially produced porphyrin anion radical. 4. Reduced porphyrin cytochrome c reacts with ferricytochrome c with a bimolecular constant of 2-10(5) M-1- S-1 in 2 mM phosphate pH 7.4, at 21 degrees C and of 2 - 10(6) M-1-S-1 under the same conditions but at 1 M ionic strength. It is proposed that electron transfer in an analogous exchange reaction between ferrocytochrome c and ferricytochrome c occurs via the exposed part of the haem.
- Published
- 1977
- Full Text
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29. The isolation and purification of cytochrome c1 from bovine heart.
- Author
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König BW, Schilder LT, Tervoort MJ, and Van Gelder BF
- Subjects
- Ammonium Sulfate, Animals, Cattle, Cholic Acids, Chromatography, DEAE-Cellulose, Cytochromes c1 analysis, Deoxycholic Acid, Heme analysis, Mercaptoethanol, Molecular Weight, Oxidation-Reduction, Spectrum Analysis, Succinate Cytochrome c Oxidoreductase analysis, Cytochrome c Group analogs & derivatives, Cytochromes c1 isolation & purification, Myocardium analysis
- Abstract
A large-scale isolation method for cytochrome c1 from beef heart is presented, based in principle on the procedure of Yu et al. (Yu, C.A., Yu, L. and King, T.E. (1972) J. Biol. Chem. 247, 1012--1019). Optimal solubilization of cytochrome c1 from succinate-cytochrome c oxidoreductase was achieved with 15% beta-mercaptoethanol, 1.5% cholate, 0.5% deoxycholate in 8% saturated ammoniun sulphate. The protein is purfied to a higher degree by chromatography on DEAE-cellulose and Ultrogel AcA 44. The method is reproducible and gives highly purified cytochrome c1 with a yield from succinate-cytochrome c oxidoreductase of 40%. The purified cytochrome c1 contains 32 nmol of heme/mg protein and has a spectral heme-to-protein ratio (Ared417nm/Ax276nm) of 2.7. Reduced cytochrome c1 is oxidized very rapidly by ferricytochrome c (k = 3 . 10(7) M-1 . S-1 at 10 degrees C, 100 mM potassium phosphate (pH 7.0) and 1% Tween 20). Polyacrylamide gel electrophoresis in the presence of sodium dodecyl sulphate shows that the isolated protein consists of one peptide, with a molecular weight of 31 000, carrying the chromophore. In the presence of 1% sodium cholate or 1% Tween 80, cytochrome c1 is in the monomeric state, whereas at lower concentrations of detergent the protein aggregates. The aggregation of cytochrome c1 is found to be reversible.
- Published
- 1980
- Full Text
- View/download PDF
30. Demonstration by EPR spectroscopy of the functional role of iron in soybean lipoxygenase-1.
- Author
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de Groot JJ, Veldink GA, Vliegenthart JF, Boldingh J, Wever R, and van Gelder BF
- Subjects
- Electron Spin Resonance Spectroscopy, Enzyme Activation, Linoleic Acids, Models, Chemical, Oxygen, Peroxides pharmacology, Protein Binding, Glycine max, Lipoxygenase metabolism, Plants enzymology
- Abstract
1. The EPR spectrum at 15 degrees K of soybean lipoxygenase-1 in borate buffer pH 9.0 has been studied in relation to the presence of substrate (linoleic acid), product (13-L-hydroperoxylinoleic acid) and oxygen. 2. The addition of 13-L-hydroperoxylinoleic acid to lipoxygenase-1 at pH 9.0 gives rise to the appearance of EPR lines at g equals 7.5, 6.2, 5.9 and 2.0, and an increased signal at g equals 4.3. 3. In view of the effect of the end product on both the kinetic lag period of the aerobic reaction and the fluorescence of the enzyme, it is concluded that 13-L-hydroperoxylinoleic acid is required for the activation of soybean lipoxygenase-1. Thus it is proposed that the enzyme with iron in the ferric state is the active species. 4. A reaction scheme is presented in which the enzyme alternatingly exists in the ferric and ferrous states for both the aerobic and anaerobic reaction.
- Published
- 1975
- Full Text
- View/download PDF
31. Biochemical and biophysical studies on cytochrome C oxidase. XIV. The reaction with cytochrome as studied by pulse radiolysis.
- Author
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Van Buuren JH, Van Gelder BF, Wilting J, and Braams R
- Subjects
- Binding Sites, Cytochrome c Group metabolism, Electron Transport, Electron Transport Complex IV metabolism, Electrons, Heme, Hydrogen-Ion Concentration, Kinetics, Mathematics, Myocardium enzymology, Oxidation-Reduction, Protein Binding, Spectrophotometry, Temperature, Time Factors, Cytochrome c Group radiation effects, Electron Transport Complex IV radiation effects, Radiation Effects
- Published
- 1974
- Full Text
- View/download PDF
32. The mechanism of reduction of cytochrome c as studied by pulse radiolysis.
- Author
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Wilting J, Van Buuren KJ, Braams R, and Van Gelder BF
- Subjects
- Animals, Horses, Hydrogen-Ion Concentration, Kinetics, Mathematics, Myocardium enzymology, Oxidation-Reduction, Temperature, Time Factors, Cytochrome c Group metabolism
- Abstract
1. The reaction of hydrated electrons with ferricytochrome c was studied using the pulse-radiolysis technique. 2. In 3.3 mM phosphate-buffer (pH 7.2), 100 mM methanol and at a concentration of cytochrome c of less than 20 muM the reduction kinetics of ferricytochrome c by hydrated electrons is a bimolecular process with a rate constant of 4.5-10-10 M-1-S-1 (21 degrees C). 3. At a concentration of cytochrome c of more than 20 muM the apparent order of the reaction of hydrated electrons with ferricytochrome c measured at 650 nm decreases due to the occurrence of a rate-determining first-order process with an estimated rate constant of 5-10-6s-1 (pH 7.2, 21 degrees C). 4. At high concentration of cytochrome c the reaction-time courses measured at 580 and 695 nm appear to be biphasic. A rapid initial phase (75% and 30% of total absorbance change at 580 and 695 nm, respectively), corresponding to the reduction reaction, is followed by a first-order change in absorbance with a rate constant of 1.3-10-5 S-1 (pH 7.2, 21 degrees C). 5. The results are interpreted in a scheme in which first a transient complex between cytochrome c and the hydrated electron is formed, after which the heme iron is reduced and followed by relaxation of the protein from its oxidized to its reduced conformation. 6. It is calculated that one of each three encounters of the hydrated electron and ferricytochrome c results in a reduction of the heme iron. This high reaction probability is discussed in terms of charge and solvent interactions. 7. A reduction mechanism for cytochrome c is favored in which the reduction equivalent from the hydrated electron is transmitted through a specific pathway from the surface of the molecule to the heme iron.
- Published
- 1975
- Full Text
- View/download PDF
33. Isolation procedure and some properties of myeloperoxidase from human leucocytes.
- Author
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Bakkenist AR, Wever R, Vulsma T, Plat H, and van Gelder BF
- Subjects
- Amino Acids analysis, Circular Dichroism, Electron Spin Resonance Spectroscopy, Humans, Oxidation-Reduction, Protein Conformation, Spectrophotometry, Leukocytes enzymology, Peroxidase blood, Peroxidase isolation & purification, Peroxidases blood
- Abstract
1. A rapid isolation procedure with a high yield for pure myeloperoxidase (donor:H2O2 oxidoreductase, EC 1.11.1.7) from normal human leucocytes is described. The enzyme was solubilized from leucocytes with the detergent, cetyltrimethylammonium bromide, and purified to apparent homogeneity. The yield of the enzyme was 17% with an absorbance ratio A430nm/A280nm = 0.85. 2. The purified enzyme showed three isoenzyme bands after polyacrylamide gel electrophoresis; ultracentrifuge studies indicated one homogeneous band with a molecular weight of 144 000. After reduction of myeloperoxidase, sodium dodecyl sulfate gel electrophoresis resolved an intense band (63 000 daltons) and a weak band (81 000 daltons). 3. The carbohydrate content of the enzyme was at least 2.5%. Mannose, glucose and N-acetylglucosamine were present. The amino acid composition is reported. 4. The EPR spectrum exhibited a high-spin heme signal with rhombic symmetry (gx = 6.92, gy = 5.07 and gz = 1.95). Upon acidification this signal was converted into a signal with more axial symmetry (g perpendicular = 5.89). At high pH (9.5) the EPR spectrum of the enzyme only shows low-spin ferric heme resonances. The circular dichroism spectra of ferric and ferrous myeloperoxidase in the visible and ultraviolet region show maxima and minima in ellipticity.
- Published
- 1978
- Full Text
- View/download PDF
34. The oxidation-reduction kinetics of the reaction of cytochrome c1 with non-physiological redox agents.
- Author
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König BW, Veerman EC, and Van Gelder BF
- Subjects
- Animals, Cattle, Indicators and Reagents, Kinetics, Osmolar Concentration, Oxidation-Reduction, Ascorbic Acid pharmacology, Cobalt pharmacology, Cytochrome c Group analogs & derivatives, Cytochromes c1 metabolism, Ferricyanides pharmacology, Organometallic Compounds, Phenanthrolines pharmacology, Phenylenediamines pharmacology, Tetramethylphenylenediamine pharmacology
- Abstract
The kinetics of the oxidation-reduction reactions of cytochrome c1 with ascorbate, ferricyanide, triphenanthrolinecobalt(III) and N,N,N',N'-tetramethyl-p-phenylenediamine (TMPD) have been examined using the stopped-flow technique. The reduction of ferricytochrome c1 by ascorbic acid is investigated as a function of pH. It is shown that at neutral and alkaline pH the reduction of the protein is mainly performed by the doubly deprotonated form of ascorbate. From the ionic-strength-dependence studies of the reactions of cytochrome c1 with ascorbate, ferricyanide and triphenanthrolinecobalt(III), it is demonstrated that the reactions rate is governed by electrostatic interactions. The second-order rate constants for the reaction of cytochrome c1 with ascorbate, ferricyanide, TMPD and triphenanthrolinecobalt(III) are 1.4 . 10(4), 3.2 . 10(3), 3.8 . 10(4) and 1.3 . 10(8) M-1 . s-1 (pH 7.9, I = 0, 10 degrees C), respectively. Application of the Debye-Hückel theory to the data of the ionic-strength-dependence studies of these redox reactions of cytochrome c1 yielded for ferrocytochrome c1 and ferricytochrome c1 a net charge of --5 and --4, respectively. The latter value is close to that of --3 for the oxidized enzyme, calculated from the amino acid sequence of the protein. This implies that not a local charge on the surface of the protein, but the overall net charge of cytochrome c1 governs the reaction rate with small redox molecules.
- Published
- 1982
- Full Text
- View/download PDF
35. An EPR study of the photodissociation reactions of oxidised cytochrome c oxidase-nitric oxide complexes.
- Author
-
Boelens R, Wever R, Van Gelder BF, and Rademaker H
- Subjects
- Animals, Cattle, Electron Spin Resonance Spectroscopy, Kinetics, Myocardium enzymology, Oxidation-Reduction, Photolysis, Protein Binding, Electron Transport Complex IV metabolism, Nitric Oxide metabolism
- Abstract
Complexes of oxidised cytochrome c oxidase with NO in the absence and presence of ligands such as formate, fluoride and cyanide are photodissociable. After photodissociation at 10 K the EPR spectrum of the high-spin cytochrome a3+3 in the absence of ligands or in the presence of fluoride or formate disappears - as does the EPR spectrum of the low-spin cytochrome a3+3 in the presence of cyanide. The action spectra of the photodissociation reaction of these complexes show slight differences but all have maxima at 640-660 nm and below 400 nm, and are assigned to a diamagnetic Cu+B-NO+ complex. The differences in the action spectra in the presence of various ligands are due to binding of these anions to the cytochrome (a3-CuB) couple. The disappearance of the cytochrome a3 signal upon photodissociation of the Cu+B-NO+ complex is explained by a magnetic interaction between cytochrome a3+3 and Cu2+B in the photodissociated complex. The temperature at which NO recombines with Cu2+B is about 30 K and slightly affected by the presence of added ligands. It is suggested that in the oxidised ligand-cytochrome c oxidase complexes the coupling ligand between cytochrome a3+3 and Cu2+B is cyanide, fluoride and formate. The observation that two ligands may bind simultaneously to the cytochrome a3-CuB couple leads to further support for the notion that during turnover of cytochrome c oxidase both metal ions are involved in binding and reduction of oxygen.
- Published
- 1983
- Full Text
- View/download PDF
36. The respiratory chain of Azotobacter vinelandii. III. The effect of cyanide in the presence of substrates.
- Author
-
Kauffman HF and Van Gelder BF
- Subjects
- Ascorbic Acid metabolism, Cytochrome d Group metabolism, Oxidation-Reduction, Oxygen metabolism, Tetramethylphenylenediamine metabolism, Azotobacter vinelandii metabolism, Bacterial Proteins metabolism, Cyanides metabolism, Electron Transport physiology, NAD metabolism
- Abstract
(1) Cyanide (100 microM) causes a rapid disappearance of the band (648 nm) of oxidized cytochrome d in particles of Azotobacter vinelandii oxidizing NADH. The rate of disappearance of the band can be related to the rate of inhibition of the oxygen consumption. (2) The kinetics of the disappearance of the 648-nm band of cytochrome d with excess cyanide in the presence of substrates deviate from first-order, indicating that at least two conformations of the enzyme are involved. (3) The rate of binding of cyanide to cytohrrome d increases the larger the rate of turnover of the oxidase. From this it is concluded that cyanide binds preferentially to the enzymically active oxidized conformation of cytochrome d. (4) The instantaneous inhibition of the oxidation of ascorbate plus N,N,N',N'-tetramethyl-p-phenylenediamine (TMPD) by cyanide is related neither to the binding of cyanide to cytochrome d as determined spectrophotometrically, nor to the rate of inhibition of the oxidation of NADH. This indicates that different oxidases are involved in the oxidation of NADH and of ascorbate plus N,N,N',N'-tetramethyl-p-phenylenediamine (TMPD), in line with the conclusion of Jones and Redfearn (1967) Biochim. Biophys. Acta 143, 340-353. (5) From experiments in which the change in redox states of cytochrome b1 and c-551 were related to the rate of binding of cyanide to cytochrome d, it is concluded that the cytochromes b1 and d are located in the main pathway to oxygen, whereas cytochrome c-551 functions in the branch via cytochrome o. (6) After prolonged incubation of particles with cyanide in the presence of NADH a residual activity (5%) was found in which a b-type cytochrome is involved. This shows the existence of a third but minor pathway to oxygen.
- Published
- 1974
- Full Text
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37. The pre-steady state reaction of ferrocytochrome c with the cytochrome c-cytochrome aa3 complex.
- Author
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Veerman EC, Wilms J, Casteleijn G, and Van Gelder BF
- Subjects
- Animals, Binding Sites, Cattle, Chemical Phenomena, Chemistry, Electron Transport, Horses, Kinetics, Osmolar Concentration, Protein Binding, Spectrum Analysis, Cytochrome c Group
- Abstract
1. Using stopped-flow technique we have investigated the electron transfer form cytochrome c to cytochrome aa3 and to the (porphyrin) cytochrome c-cytochrome aa3 complex. 2. In a low ionic strength medium, the pre-steady state reaction occurs in a biphasic way with rate constants of at least 2.10(8) M-1.s-1 and about 10(7) M-1.S-1 (I=8.8 mM, pH 7.0, 10 degrees C), respectively. 3. A comparison of the rate constants, determined in the presence of an excess of cytochrome c with those found in the presence of an excess of cytochrome aa3 reveals the existence of two slower reacting sites on the functional unit (2 hemes and 2 coppers) of cytochrome aa3. On basis of these results we discuss various models. If no site-site interactions are assumed (non-cooperative model) cytochrome aa3 has 2 high and 2 low affinity sites available for the reaction with ferrocytochrome c. If negative cooperativity occurs, cytochrome aa3 has 2 high affinity sites which change into 2 low affinity sites upon binding of one cytochrome c molecule. The latter model is favoured.
- Published
- 1980
- Full Text
- View/download PDF
38. The cytochrome c oxidase-azide-nitric oxide complex as a model for the oxygen-binding site.
- Author
-
Boelens R, Rademaker H, Wever R, and Van Gelder BF
- Subjects
- Azides pharmacology, Binding Sites, Electron Spin Resonance Spectroscopy, Kinetics, Protein Binding, Thermodynamics, Electron Transport Complex IV metabolism, Nitric Oxide metabolism
- Abstract
The complex of cytochrome c oxidase with NO and azide has been studied by EPR at 9.2 and 35 GHz. This complex which shows delta ms = 2 EPR triplet and strong anisotropic signals, due to the interaction of cytochrome a2+3 X NO (S = 1/2) and Cu2+B (S = 1/2), is photodissociable . Its action spectrum is similar to that of cytochrome a2+3 X NO with bands at 430, 560 and 595 nm, but shows an additional band in the near ultraviolet region. The quantum yield of the photodissociation process of cytochrome a2+3 X NO in the metal pair appears to depend on the redox state of CuB. When the photolysed sample was warmed to 77 K, a complex was observed with the EPR parameters of cytochrome a3+3 - N-3 - Cu1 +B (S = 1/2). This process of electron and ligand transfer can be reversed by heating the sample to 220 K. It is suggested that in the triplet species azide is bound to Cu2+B whereas NO is bridged between Cu2+B and the haem iron of the cytochrome a2+3. The complex has a triplet ground state and a singlet excited state with an exchange interaction J = -7.1 cm-1 between both spins. The anisotropy in the EPR spectra is mainly due to a magnetic dipole-dipole interaction between cytochrome a2+3 X NO and Cu2+B. From simulations of the triplet EPR spectra obtained at 9 and 35 GHz, a value for the distance between the nitroxide radical and Cu2+B of 0.33 nm was found. A model of the NO binding in the cytochrome a3-Cu pair shows a distance between the haem iron of cytochrome a3 and CuB of 0.45 nm. It is concluded that the cytochrome a3-CuB pair forms a cage in which the dioxygen molecule is bidentate coordinated to the two metals during the catalytic reaction.
- Published
- 1984
- Full Text
- View/download PDF
39. Biochemical and biophysical studies on cytochrome c oxidase. XIII. Effect of cholate on the enzymic activity.
- Author
-
Van Buuren KJ and Van Gelder BF
- Subjects
- Animals, Deoxycholic Acid chemistry, Deoxycholic Acid metabolism, Detergents chemistry, Electron Transport Complex IV antagonists & inhibitors, Electron Transport Complex IV chemistry, Horses, Mitochondria, Heart enzymology, Cholates metabolism, Electron Transport Complex IV metabolism
- Abstract
(1) Cholate is a mixed-type inhibitor of the enzymic activity of cytochrome c oxidase. The rate equations for mixed-type inhibition of the enzyme have been derived, based on Minnaert's Mechanism IV (1961, Biochim. Biophys. Acta 50, 23-34). The Ki of cholate for the free enzyme (E) and for the complexes of the enzyme with cytochrome c (ES and EP) was determined, being 125 and 190 microM, respectively. (2) Comparison of the properties of cholate and the intrinsic inhibitor of cytochrome c oxidase (Van Buuren et al. (1971) Biochim. Biophys. Acta 243, 468-480) with respect to their type of inhibition and their affinity for enzyme, reveals that they are identical.
- Published
- 1974
- Full Text
- View/download PDF
40. Optical properties of cytochromes from beef heart mitochondria, submitochondrial vesicles, and derived preparations.
- Author
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van Gelder BF
- Subjects
- Animals, Cattle, Heme analysis, Spectrophotometry, Cytochromes, Mitochondria enzymology, Mitochondria, Heart enzymology, Submitochondrial Particles enzymology
- Published
- 1978
- Full Text
- View/download PDF
41. A spectroscopic study of nitric-oxide-treated ceruloplasmin.
- Author
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van Leeuwen FX and van Gelder BF
- Subjects
- Circular Dichroism, Copper, Electron Spin Resonance Spectroscopy, Humans, Protein Binding, Protein Conformation, Spectrophotometry, Ceruloplasmin, Nitric Oxide
- Published
- 1978
- Full Text
- View/download PDF
42. Biochemical and biophysical studies on cytochrome oxidase. XV. Reaction with fluoride.
- Author
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Muijsers AO, Van Buuren KJ, and Van Gelder BF
- Subjects
- Binding Sites, Cytochrome c Group, Kinetics, Mathematics, Oxidation-Reduction, Protein Binding, Protein Conformation, Spectrophotometry, Spectrophotometry, Ultraviolet, Surface-Active Agents, Time Factors, Electron Transport Complex IV antagonists & inhibitors, Fluorides pharmacology
- Published
- 1974
- Full Text
- View/download PDF
43. Ionic strength effects on cytochrome aa3 kinetics.
- Author
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Wilms J, Veerman EC, König BW, Dekker HL, and van Gelder BF
- Subjects
- Animals, Binding Sites, Cattle, Cytochrome c Group metabolism, Cytochromes c1 metabolism, Kinetics, Osmolar Concentration, Polylysine metabolism, Electron Transport Complex IV metabolism
- Abstract
1. The occurrence of an optimal ionic strength for the steady-state activity of isolated cytochrome aa3 can be attributed to two opposite effects: upon lowering of the ionic strength the affinity between cytochrome c and cytochrome aa3 increases, whereas in the lower ionic strength region the formation of a less active cytochrome c-aa3 complex limits the ferrocytochrome c association to the low affinity site. 2. At low ionic strength, the reduction of cytochrome c-aa3 complex by ferrocytochrome c1 proceeds via non-complex-bound cytochrome c. Under these conditions the positively charged cytochrome c provides the electron transfer between the negatively charged cytochromes c1 and aa3. 3. Polylysine is found to stimulate the release of tightly bound cytochrome c from the cytochrome c-aa3 complex. This property points to the existence of negative cooperativity between the two binding sites. We suggest that the stimulation is not restricted to polylysine, but also occurs with cytochrome c. 4. Dissociation rates of both high and low affinity sites on cytochrome aa3 were determined indirectly. The dissociation constants, calculated on the basis of pre-steady-state reaction rates at an ionic strength of 8.8 mM, were estimated to be 0.6 nM and 20 microM for the high and low affinity site, respectively.
- Published
- 1981
- Full Text
- View/download PDF
44. Separation of enzymically active bovine cytochrome c oxidase monomers and dimers by high performance liquid chromatography.
- Author
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Hakvoort TB, Sinjorgo KM, Van Gelder BF, and Muijsers AO
- Subjects
- Animals, Cattle, Chromatography, High Pressure Liquid, Cytochrome c Group metabolism, Electron Transport Complex IV metabolism, Kinetics, Macromolecular Substances, Myocardium enzymology, Osmolar Concentration, Spectrophotometry, Electron Transport Complex IV isolation & purification
- Abstract
The aggregation state of two types of bovine heart cytochrome c oxidase preparations in the presence of laurylmaltoside was investigated by high performance liquid chromatography in two buffers of ionic strengths of 388 mM and 45 mM, respectively. At high ionic strength, it was found that the Fowler cytochrome c oxidase preparation was monomeric (Mr = 2 X 10(5)), while monomers and dimers (2 X aa3, Mr = 4 X 10(5)) could be isolated from the Yonetani preparation. Under these conditions there was no rapid equilibrium between the two forms. Covalent cytochrome c oxidase-cytochrome c complexes were largely dimeric, and addition of ascorbate and cytochrome c to the oxidase also promoted dimerization. At low ionic strength (I = 45 mM) in the presence of laurylmaltoside the oxidase and the covalent complex with cytochrome c were largely monomeric. In the steady-state oxidation of ferrous horse heart cytochrome c, the monomeric enzyme displayed biphasic kinetics at I = 45 mM. This suggests that the presence of high- and low-affinity reactions is an intrinsic property of the cytochrome c oxidase monomer.
- Published
- 1985
- Full Text
- View/download PDF
45. Preparation of cytochrome oxidase from beef heart.
- Author
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Hartzell CR, Beinert H, van Gelder BF, and King TE
- Subjects
- Animals, Cattle, Electron Transport Complex IV metabolism, Kinetics, Oxidation-Reduction, Potentiometry, Spectrophotometry, Electron Transport Complex IV isolation & purification, Mitochondria, Heart enzymology
- Published
- 1978
- Full Text
- View/download PDF
46. Biochemical and biophysical studies on cytochrome c oxidase. XVI. Circular dichroic study of cytochrome c oxidase and its ligand complexes.
- Author
-
Tiesjema RH and van Gelder BF
- Subjects
- Azides, Binding Sites, Carbon Monoxide, Circular Dichroism, Cyanides, Cytochrome c Group, Ligands, Mathematics, Myocardium enzymology, Nitric Oxide, Oxidation-Reduction, Oxygen, Protein Binding, Protein Conformation, Spectrophotometry, Spectrophotometry, Ultraviolet, Thiosulfates, Electron Transport Complex IV
- Published
- 1974
- Full Text
- View/download PDF
47. An EPR study of myeloperoxidase in human granulocytes.
- Author
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Wever R, Roos D, Weening RS, Vulsma T, and Van Gelder BF
- Subjects
- Animals, Chickens, Electron Spin Resonance Spectroscopy, Humans, Protein Conformation, Species Specificity, Granulocytes enzymology, Peroxidase blood, Peroxidases blood
- Abstract
1. EPR spectra of human granulocytes (4 - 10(8) cells per ml) show an intense high-spin ferric heme signal with rhombic symmetry (gx = 6.90 and gy = 5.07) for the heme group. These g-values are identical to those of partially purified myeloperoxidase and thus the signal is derived from ferric myeloperoxidase. In chicken granulocytes, which contain little or no myeloperoxidase, only an axial type of heme iron signal, weak in intensity, can be detected at g = 6.0. 2. Upon phagocytosis of latex particles by human granulocytes the high-spin heme signal with rhombic symmetry is slowly converted into a signal with axial symmetry (gx = gy = 6.0), showing that the EPR signals of myeloperoxidase in the intact cell can be used to study the involvement of the enzyme in metabolic changes during phagocytosis.
- Published
- 1976
- Full Text
- View/download PDF
48. Hemosiderin. an EPR study of water-insoluble iron in human and rat liver.
- Author
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van Leeuwen FX, Zuyderhoudt FJ, van Gelder BF, and van Gool J
- Subjects
- Animals, Electron Spin Resonance Spectroscopy, Humans, Male, Postmortem Changes, Rats, Solubility, Heme analysis, Hemosiderin analysis, Iron analysis, Liver analysis
- Abstract
EPR spectra of the water-insoluble iron fraction, hemosiderin of human and rat liver are described. The homogenate of freshly prepared perfused rat liver shows a non-heme iron signal at g=4.3 and a high-spin heme-iron signal around g=6, whereas the washed and sonicated sample of the insoluble iron fraction shows solely a non-heme iron signal at g=4.3. This indicates that hemosiderin from rat liver does not contain heme iron. Human-liver preparations from post mortem obtained material show in the homogenates as well as in the washed and sonicated samples an intense high-spin heme iron signal at g=6.0 and a non-heme iron signal at g=4.3. A comparative experiment, carried out with "aged" rat liver preparations, reveals the same spectra as with the human preparations. It is concluded that that the heme present in the insoluble iron fraction is caused by degradation of hemoglobin in the obduction material, and that heme is not a constituent of the insoluble depot iron.
- Published
- 1977
- Full Text
- View/download PDF
49. Biochemical and biophysical studies on cytochrome c oxidase. XX. Reaction with sulphide.
- Author
-
Wever R, van GELDER BF, and Dervartanian DV
- Subjects
- Animals, Azides, Binding Sites, Cattle, Copper analysis, Cyanides, Electron Spin Resonance Spectroscopy, Heme analysis, Myocardium enzymology, Oxidation-Reduction, Protein Binding, Protein Conformation, Electron Transport Complex IV metabolism, Sulfides
- Abstract
1. Upon addition of sulphide to oxidized cytochrome c oxidase, a low-spin heme sulphide compound is formed with an EPR signal at gx = 2.54, gy = 2.23 and gz = 1.87. Concomitantly with the formation of this signal the EPR-detectable low-spin heme signal at g = 3 and the copper signal near g = 2 decrease in intensity, pointing to a partial reduction of the enzyme by sulphide. 2. The addition of sulphide to cytochrome c oxidase, previously reduced in the presence of azide or cyanide, brings about a disappearance of the azido-cytochrome c oxidase signal at gx = 2.9, gy = 2.2, and gz = 1.67 and a decrease of the signal at g = 3.6 of cyano-cytochrome c oxidase. Concomitantly the sulphide-induced EPR signal is formed. 3. These observations demonstrate that azide, cyanide and sulphide are competitive for an oxidized binding site on cytochrome c oxidase. Moreover, it is shown that the affinity of cyanide and sulphide for this site is greater than that of azide.
- Published
- 1975
- Full Text
- View/download PDF
50. Low-spin forms of cytochrome c oxidase.
- Author
-
Wever R, van Ark G, and van Gelder BF
- Subjects
- Animals, Cattle, Electron Spin Resonance Spectroscopy, Myocardium enzymology, Nitric Oxide, Oxidation-Reduction, Electron Transport Complex IV
- Published
- 1977
- Full Text
- View/download PDF
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