23 results on '"van Denderen, Bryce J. W."'
Search Results
2. Cancer: The to and fro of tumour spread
- Author
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van Denderen, Bryce J. W. and Thompson, Erik W.
- Published
- 2013
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3. Adipose Triglyceride Lipase Regulation of Skeletal Muscle Lipid Metabolism and Insulin Responsiveness
- Author
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Watt, Matthew J., van Denderen, Bryce J. W., Castelli, Laura A., Bruce, Clinton R., Hoy, Andrew J., Kraegen, Edward W., Macaulay, Lance, and Kemp, Bruce E.
- Published
- 2008
4. AMP-Activated Protein Kinase Is Not Down-Regulated in Human Skeletal Muscle of Obese Females
- Author
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Steinberg, Gregory R., Smith, Angela C., van Denderen, Bryce J. W., Chen, Zhiping, Murthy, Sid, Campbell, Duncan J., Heigenhauser, G J. F., Dyck, David J., and Kemp, Bruce E.
- Published
- 2004
5. Exemplary multiplex bisulfite amplicon data used to demonstrate the utility of Methpat
- Author
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Wong, Nicholas C., primary, Pope, Bernard J., additional, Candiloro, Ida, additional, Korbie, Darren, additional, Trau, Matt, additional, Wong, Stephen Q., additional, Mikeska, Thomas, additional, van Denderen, Bryce J. W., additional, Thompson, Erik W., additional, Eggers, Stefanie, additional, Doyle, Stephen R., additional, and Dobrovic, Alexander, additional
- Published
- 2015
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- View/download PDF
6. Abstract 3428: Coordinated regulation of mesenchymal epithelial transition in the PMC42-LA breast cancer cell line variant
- Author
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Hugo, Honor J., van Denderen, Bryce J. W., Tomaskovic-Crook, Eva, Blick, Tony, Huang, Dexing, Pinto, Cletus, Soo, Eliza, Fabra-Fres, Angels, Haviv, Izhak, Goodall, Greg, Wong, Nicholas, Ackland, Leigh, Newgreen, Don F., Waltham, Mark, Thompson, Erik W., Hugo, Honor J., van Denderen, Bryce J. W., Tomaskovic-Crook, Eva, Blick, Tony, Huang, Dexing, Pinto, Cletus, Soo, Eliza, Fabra-Fres, Angels, Haviv, Izhak, Goodall, Greg, Wong, Nicholas, Ackland, Leigh, Newgreen, Don F., Waltham, Mark, and Thompson, Erik W.
- Published
- 2011
7. Adipose triglyceride lipase regulation of skeletal muscle lipid metabolism and insulin responsiveness (Molecular Endocrinology (2008) 22, (1200-1212) DOI: 10.1210/me.2007-0485) erratum
- Author
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Watt, Matthew J., Van, Denderen Bryce J. W., Castelli, Laura A., Bruce, Clinton R., Hoy, Andrew J., Kraegen, Edward W., Macaulay, Lance, Kemp, Bruce E., Watt, Matthew J., Van, Denderen Bryce J. W., Castelli, Laura A., Bruce, Clinton R., Hoy, Andrew J., Kraegen, Edward W., Macaulay, Lance, and Kemp, Bruce E.
- Published
- 2010
8. AMPK couples plasma renin to cellular metabolism by phosphorylation of ACC1
- Author
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Fraser, Scott A., primary, Choy, Suet-Wan, additional, Pastor-Soler, Núria M., additional, Li, Hui, additional, Davies, Matthew R. P., additional, Cook, Natasha, additional, Katerelos, Marina, additional, Mount, Peter F., additional, Gleich, Kurt, additional, McRae, Jennifer L., additional, Dwyer, Karen M., additional, van Denderen, Bryce J. W., additional, Hallows, Kenneth R., additional, Kemp, Bruce E., additional, and Power, David A., additional
- Published
- 2013
- Full Text
- View/download PDF
9. The to and fro of tumour spread
- Author
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van Denderen, Bryce J. W., primary and Thompson, Erik W., additional
- Published
- 2013
- Full Text
- View/download PDF
10. Remodeling of Purinergic Receptor-Mediated Ca2+ Signaling as a Consequence of EGF-Induced Epithelial-Mesenchymal Transition in Breast Cancer Cells
- Author
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Davis, Felicity M., primary, Kenny, Paraic A., additional, Soo, Eliza T-L., additional, van Denderen, Bryce J. W., additional, Thompson, Erik W., additional, Cabot, Peter J., additional, Parat, Marie-Odile, additional, Roberts-Thomson, Sarah J., additional, and Monteith, Gregory R., additional
- Published
- 2011
- Full Text
- View/download PDF
11. Mutations in the Gal83 Glycogen-Binding Domain Activate the Snf1/Gal83 Kinase Pathway by a Glycogen-Independent Mechanism
- Author
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Wiatrowski, Heather A., primary, van Denderen, Bryce J. W., additional, Berkey, Cristin D., additional, Kemp, Bruce E., additional, Stapleton, David, additional, and Carlson, Marian, additional
- Published
- 2004
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- View/download PDF
12. IDENTIFICATION OF IMMUNODOMINANT PEPTIDES FOLLOWING DST AND REJECTION IN THE LEW.1W TO LEW.1A MODEL.
- Author
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van Denderen, Bryce J. W., primary, Peche, Hélène, additional, Cuturi, Maria-Cristina, additional, and Soulillou, Jean-Paul, additional
- Published
- 1999
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- View/download PDF
13. AMPK couples plasma renin to cellular metabolism by phosphorylation of ACC1.
- Author
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Fraser, Scott A., Choy, Suet-Wan, Pastor-Soler, Núria M., Hui Li, Davies, Matthew R. P., Cook, Natasha, Katerelos, Marina, Mount, Peter F., Gleich, Kurt, McRae, Jennifer L., Dwyer, Karen M., van Denderen, Bryce J. W., Hallows, Kenneth R., Kemp, Bruce E., and Power, David A.
- Subjects
CELL metabolism ,MITOGEN-activated protein kinase kinase ,SODIUM-chloride cotransporter ,LABORATORY mice ,ENZYME inhibitors ,SECRETION ,CELLULAR signal transduction ,RENIN ,PHOSPHORYLATION - Abstract
Salt reabsorption is the major energy-requiring process in the kidney, and AMP-activated protein kinase (AMPK) is an important regulator of cellular metabolism. Mice with targeted deletion of the ß1-subunit of AMPK (AMPK-ß1
-/- mice) had significantly increased urinary Na+ excretion on a normal salt diet. This was associated with reduced expression of the ß-subunit of the epithelial Na+ channel (ENaC) and increased subapical tubular expression of kidney-specific Na+ -K+ -2Cl- cotransporter 2 (NKCC2) in the medullary thick ascending limb of Henle. AMPK-ß1-/- mice fed a salt-deficient diet were able to conserve Na+ , but renin secretion increased 180% compared with control mice. Cyclooxygenase-2 mRNA also increased in the kidney cortex, indicating greater signaling through the macula densa tubular salt-sensing pathway. To determine whether the increase in renin secretion was due to a change in regulation of fatty acid metabolism by AMPK, mice with a mutation of the inhibitory AMPK phosphosite in acetyl-CoA carboxylase 1 [ACC1-knockin (KI)S79A mice] were examined. ACC1-KIS79A mice on a normal salt diet had no increase in salt loss or renin secretion, and expression of NKCC2, Na+ -Cl- cotransporter, and ENaC-ß were similar to those in control mice. When mice were placed on a salt-deficient diet, however, renin secretion and cortical expression of cyclooxygenase-2 mRNA increased significantly in ACC1-KIS79A mice compared with control mice. In summary, our data suggest that renin synthesis and secretion are regulated by AMPK and coupled to metabolism by phosphorylation of ACC1. [ABSTRACT FROM AUTHOR]- Published
- 2013
- Full Text
- View/download PDF
14. AMPK β1 Deletion Reduces Appetite, Preventing Obesity and Hepatic Insulin Resistance.
- Author
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Dzamko, Nicolas, van Denderen, Bryce J. W., Hevener, Andrea L., Jørgensen, Sebastian Beck, Honeyman, Jane, GaIic, Sandra, Zhi-Ping Chen, Watt, Matthew J., Campbell, Duncan J., Steinberg, Gregory R., and Kemp, Bruce E.
- Subjects
- *
PROTEIN kinases , *OBESITY , *INSULIN resistance , *ADIPOSE tissues , *INGESTION , *DIET - Abstract
The AMP-activated protein kinase (AMPK) is an αβγ heterotrimer that regulates appetite and fuel metabolism. We have generated AMPK β1-/- mice on a C57Bl/6 background that are viable, fertile, survived greater than 2 years, and display no visible brain developmental defects. These mice have a 90% reduction in hepatic AMPK activity due to loss of the catalytic a subunits, with modest reductions of activity detected in the hypothalamus and white adipose tissue and no change in skeletal muscle or heart. On a low fat or an obesity-inducing high fat diet, β1-/- mice had reduced food intake, reduced adiposity, and reduced total body mass. Metabolic rate, physical activity, adipose tissue lipolysis, and lipogenesis were similar to wild type littermates. The reduced appetite and body mass of β1-/- mice were associated with protection from high fat diet-induced hyperinsulinemia, hepatic steatosis, and insulin resistance. We demonstrate that the loss of β1 reduces food intake and protects against the deleterious effects of an obesity-inducing diet. [ABSTRACT FROM AUTHOR]
- Published
- 2010
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15. AMP-Activated Protein Kinase Regulates GLUT4 Transcription by Phosphorylating Histone Deacetylase 5.
- Author
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McGee, Sean L., Van Denderen, Bryce J. W., Howlett, Kirsten F., Mollica, Janelle, Schertzer, Jonathan D., Kemp, Bruce E., and Hargreaves, Mark
- Subjects
- *
PROTEIN kinases , *MUSCLES , *GENE expression , *HISTONE deacetylase , *INSULIN resistance , *DIABETES - Abstract
OBJECTIVE--Insulin resistance associated with obesity and diabetes is ameliorated by specific overexpression of GLUT4 in skeletal muscle. The molecular mechanisms regulating skeletal muscle GLUT4 expression remain to be elucidated. The purpose of this study was to examine these mechanisms. RESEARCH DESIGN AND METHODS AND RESULTS--Here, we report that AMP-activated protein kinase (AMPK) regulates GLUT4 transcription through the histone deacetylase (HDAC)5 transcriptional repressor. Overexpression of HDAC5 represses GLUT4 reporter gene expression, and HDAC inhibition in human primary myotubes increases endogenous GLUT4 gene expression. In vitro kinase assays, site-directed mutagenesis, and site-specific phospho-antibodies establish AMPK as an HDAC5 kinase that targets S259 and S498. Constitutively active but not dominant-negative AMPK and 5-aminoimidazole-4-carboxamide-1-β-D-ribonucleoside (AICAR) treatment in human primary myotubes results in HDAC5 phosphorylation at S259 and S498, association with 14-3-3 isoforms, and H3 acetylation. This reduces HDAC5 association with the GLUT4 promoter, as assessed through chromatin immunoprecipitation assays and HDAC5 nuclear export, concomitant with increases in GLUT4 gene expression. Gene reporter assays also confirm that the HDAC5 S259 and S498 sites are required for AICAR induction of GLUT4 transcription. CONCLUSIONS--These data reveal a signal transduction pathway linking cellular energy charge to gene transcription directed at restoring cellular and whole-body energy balance and provide new therapeutic targets for the treatment and management of insulin resistance and type 2 diabetes. [ABSTRACT FROM AUTHOR]
- Published
- 2008
- Full Text
- View/download PDF
16. Direct repression of MYB by ZEB1 suppresses proliferation and epithelial gene expression during epithelial-to-mesenchymal transition of breast cancer cells.
- Author
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Hugo, Honor J, Pereira, Lloyd, Suryadinata, Randy, Drabsch, Yvette, Gonda, Thomas J, Gunasinghe, N P A Devika, Pinto, Cletus, Soo, Eliza Tl, van Denderen, Bryce Jw, Hill, Prue, Ramsay, Robert G, Sarcevic, Boris, Newgreen, Donald F, Thompson, Erik W, Soo, Eliza T L, and van Denderen, Bryce J W
- Abstract
Introduction: Epithelial-to-mesenchymal transition (EMT) promotes cell migration and is important in metastasis. Cellular proliferation is often downregulated during EMT, and the reverse transition (MET) in metastases appears to be required for restoration of proliferation in secondary tumors. We studied the interplay between EMT and proliferation control by MYB in breast cancer cells.Methods: MYB, ZEB1, and CDH1 expression levels were manipulated by lentiviral small-hairpin RNA (shRNA)-mediated knockdown/overexpression, and verified with Western blotting, immunocytochemistry, and qRT-PCR. Proliferation was assessed with bromodeoxyuridine pulse labeling and flow cytometry, and sulforhodamine B assays. EMT was induced with epidermal growth factor for 9 days or by exposure to hypoxia (1% oxygen) for up to 5 days, and assessed with qRT-PCR, cell morphology, and colony morphology. Protein expression in human breast cancers was assessed with immunohistochemistry. ZEB1-MYB promoter binding and repression were determined with Chromatin Immunoprecipitation Assay and a luciferase reporter assay, respectively. Student paired t tests, Mann-Whitney, and repeated measures two-way ANOVA tests determined statistical significance (P < 0.05).Results: Parental PMC42-ET cells displayed higher expression of ZEB1 and lower expression of MYB than did the PMC42-LA epithelial variant. Knockdown of ZEB1 in PMC42-ET and MDA-MB-231 cells caused increased expression of MYB and a transition to a more epithelial phenotype, which in PMC42-ET cells was coupled with increased proliferation. Indeed, we observed an inverse relation between MYB and ZEB1 expression in two in vitro EMT cell models, in matched human breast tumors and lymph node metastases, and in human breast cancer cell lines. Knockdown of MYB in PMC42-LA cells (MYBsh-LA) led to morphologic changes and protein expression consistent with an EMT. ZEB1 expression was raised in MYBsh-LA cells and significantly repressed in MYB-overexpressing MDA-MB-231 cells, which also showed reduced random migration and a shift from mesenchymal to epithelial colony morphology in two dimensional monolayer cultures. Finally, we detected binding of ZEB1 to MYB promoter in PMC42-ET cells, and ZEB1 overexpression repressed MYB promoter activity.Conclusions: This work identifies ZEB1 as a transcriptional repressor of MYB and suggests a reciprocal MYB-ZEB1 repressive relation, providing a mechanism through which proliferation and the epithelial phenotype may be coordinately modulated in breast cancer cells. [ABSTRACT FROM AUTHOR]- Published
- 2013
- Full Text
- View/download PDF
17. AMP-activated Protein Kinase β Subunit Tethers α and γ Subunits via Its C-terminal Sequence (186-270).
- Author
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Iseli, Tristan J., Mark Walter, Van Denderen, Bryce J. W., Katsis, Frosa, Witters, Lee A., Kemp, Bruce E., Michell, Belinda J., and Stapleton, David
- Subjects
- *
PROTEIN kinases , *ADENOSINE monophosphate , *GLUCANS , *METABOLISM , *GLYCOGEN , *BIOCHEMISTRY - Abstract
AMP-activated protein kinase (AMPK) is an important metabolic stress-sensing protein kinase responsible for regulating metabolism in response to changing energy demand and nutrient supply. Mammalian AMPK is a stable αΒγ heterotrimer comprising a catalytic a and two non-catalytic subunits, β and γ. The β subunit targets AMPK to membranes via an N-terminal myristoyl group and to glycogen via a mid-molecule glycogen-binding domain. Here we find that the conserved C-terminal 85-residue sequence of the B subunit, β1-(186-270), is sufficient to form an active AMP-dependent heterotrimer α1 β1(186-270)-γ1, whereas the 25-residue β1 C-terminal (246270) sequence is sufficient to bind γ1, γ2, or γ3 but not the α subunit. Deletion of the β C-terminal Ile-270 precludes βγ association in the absence of the α subunit, but the presence of the a subunit or substitution of Ile-270 with Ala or Glu restores βγ binding. Truncation of the a subunit reveals that BI binding requires the α1-(313-473) sequence. The conserved C-terminal 85-residue sequence of the β subunit (90% between β1 and β2) is the primary ay binding sequence responsible for the formation of the AMPK αβγ heterotrimer. [ABSTRACT FROM AUTHOR]
- Published
- 2005
- Full Text
- View/download PDF
18. Whole Body Deletion of AMP-activated Protein Kinase β2 Reduces Muscle AMPK Activity and Exercise Capacity.
- Author
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Steinberg, Gregory R., O'Neill, Hayley M., Dzamko, Nicolas L., Galic, Sandra, Naim, Tim, Koopman, René, Jørgensen, Sebastian B., Honeyman, Jane, Hewitt, Kimberly, Zhi-Ping Chen, Schertzer, Jonathan D., Scott, John W., Koentgen, Frank, Lynch, Gordon S., Watt, Matthew J., van Denderen, Bryce J. W., Campbell, Duncan J., and Kemp, Bruce E.
- Subjects
- *
PROTEIN kinases , *CARRIER proteins , *ENZYMES , *IMIDAZOLES , *LABORATORY mice - Abstract
AMP-activated protein kinase (AMPK) β subunits (β1 and β2) provide scaffolds for binding α and ? subunits and contain a carbohydrate-binding module important for regulating enzyme activity. We generated C57Bl/6 mice with germline deletion of AMPK β2 (β2 KO) and examined AMPK expression and activity, exercise capacity, metabolic control during muscle contractions, aminoimidazole carboxamide ribonucleotide (AICAR) sensitivity, and susceptibility to obesity-induced insulin resistance. We find that β2 KO mice are viable and breed normally. β2 KO mice had a reduction in skeletal muscle AMPK α1 and α2 expression despite up-regulation of the β1 isoform. Heart AMPK α2 expression was also reduced but this did not affect resting AMPK α1 or α2 activities. AMPK α1 and α2 activities were not changed in liver, fat, or hypothalamus. AICAR-stimulated glucose uptake but not fatty acid oxidation was impaired in β2 KO mice. During treadmill running β2 KO mice had reduced maximal and endurance exercise capacity, which was associated with lower muscle and heart AMPK activity and reduced levels of muscle and liver glycogen. Reductions in exercise capacity of β2 KO mice were not due to lower muscle mitochondrial content or defects in contraction-stimulated glucose uptake or fatty acid oxidation. When challenged with a high-fat diet β2 KO mice gained more weight and were more susceptible to the development of hyperinsulinemia and glucose intolerance. In summary these data show that deletion of AMPK β2 reduces AMPK activity in skeletal muscle resulting in impaired exercise capacity and the worsening of diet-induced obesity and glucose intolerance. [ABSTRACT FROM AUTHOR]
- Published
- 2010
- Full Text
- View/download PDF
19. AMPK/SNF1 structure: a menage a trois of energy-sensing.
- Author
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Scott JW, Oakhill JS, and van Denderen BJ
- Subjects
- AMP-Activated Protein Kinases chemistry, Energy Metabolism, Humans, Models, Molecular, Protein Conformation, Protein Serine-Threonine Kinases chemistry, AMP-Activated Protein Kinases metabolism, Protein Serine-Threonine Kinases metabolism
- Abstract
The AMP-activated protein kinase (AMPK) is the critical component of a highly conserved signalling pathway found in all eukaryotes that plays a key role in regulating metabolic processes in response to variations in energy supply and demand. AMPK protects cells from stresses that decrease cellular energy charge (i.e increase the AMP:ATP ratio) by initiating a shift in metabolism towards the generation of ATP while simultaneously down regulating pathways that consume ATP. The role of AMPK as an energy sensor extends beyond the cell and it is now apparent that it is a key regulator of whole-body energy homeostasis. These functions have stimulated considerable interest in AMPK as a promising target to treat metabolic disorders such as obesity and Type 2 diabetes. Recently, crystal structures of heterotrimeric core fragments and individual domains of AMPK from mammals, Schizosaccharomyces pombe and Saccharomyces cerevisiae have been solved. Together they provide an impressive insight into the molecular interactions involved in regulating kinase activity, heterotrimeric assembly, glycogen binding, and binding of the regulatory nucleotides AMP and ATP.
- Published
- 2009
- Full Text
- View/download PDF
20. Thienopyridone drugs are selective activators of AMP-activated protein kinase beta1-containing complexes.
- Author
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Scott JW, van Denderen BJ, Jorgensen SB, Honeyman JE, Steinberg GR, Oakhill JS, Iseli TJ, Koay A, Gooley PR, Stapleton D, and Kemp BE
- Subjects
- AMP-Activated Protein Kinases chemistry, Adenosine Monophosphate metabolism, Animals, Biphenyl Compounds, COS Cells, Carbohydrate Metabolism, Catalytic Domain, Chlorocebus aethiops, Enzyme Activation drug effects, Glucose metabolism, Hepatocytes metabolism, Isoenzymes chemistry, Isoenzymes metabolism, Mice, Recombinant Proteins chemistry, Recombinant Proteins metabolism, Sensitivity and Specificity, Substrate Specificity, AMP-Activated Protein Kinases metabolism, Pyrones pharmacology, Thiophenes pharmacology
- Abstract
The AMP-activated protein kinase (AMPK) is an alphabetagamma heterotrimer that plays a pivotal role in regulating cellular and whole-body metabolism. Activation of AMPK reverses many of the metabolic defects associated with obesity and type 2 diabetes, and therefore AMPK is considered a promising target for drugs to treat these diseases. Recently, the thienopyridone A769662 has been reported to directly activate AMPK by an unexpected mechanism. Here we show that A769662 activates AMPK by a mechanism involving the beta subunit carbohydrate-binding module and residues from the gamma subunit but not the AMP-binding sites. Furthermore, A769662 exclusively activates AMPK heterotrimers containing the beta1 subunit. Our findings highlight the regulatory role played by the beta subunit in modulating AMPK activity and the possibility of developing isoform specific therapeutic activators of this important metabolic regulator.
- Published
- 2008
- Full Text
- View/download PDF
21. Tumor necrosis factor alpha-induced skeletal muscle insulin resistance involves suppression of AMP-kinase signaling.
- Author
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Steinberg GR, Michell BJ, van Denderen BJ, Watt MJ, Carey AL, Fam BC, Andrikopoulos S, Proietto J, Görgün CZ, Carling D, Hotamisligil GS, Febbraio MA, Kay TW, and Kemp BE
- Subjects
- Adenylate Kinase genetics, Animals, Lipid Metabolism genetics, Mice, Mice, Mutant Strains, Muscle, Skeletal pathology, Obesity genetics, Obesity pathology, Oxidation-Reduction, Phosphoprotein Phosphatases genetics, Phosphoprotein Phosphatases metabolism, Protein Phosphatase 2C, Receptors, Tumor Necrosis Factor, Type I deficiency, Receptors, Tumor Necrosis Factor, Type I metabolism, Receptors, Tumor Necrosis Factor, Type II genetics, Receptors, Tumor Necrosis Factor, Type II metabolism, Tumor Necrosis Factor-alpha genetics, Adenylate Kinase biosynthesis, Insulin Resistance genetics, Muscle, Skeletal enzymology, Obesity enzymology, Signal Transduction genetics, Tumor Necrosis Factor-alpha metabolism
- Abstract
Elevated levels of tumor necrosis factor (TNFalpha) are implicated in the development of insulin resistance, but the mechanisms mediating these chronic effects are not completely understood. We demonstrate that TNFalpha signaling through TNF receptor (TNFR) 1 suppresses AMPK activity via transcriptional upregulation of protein phosphatase 2C (PP2C). This in turn reduces ACC phosphorylation, suppressing fatty-acid oxidation, increasing intramuscular diacylglycerol accumulation, and causing insulin resistance in skeletal muscle, effects observed both in vitro and in vivo. Importantly even at pathologically elevated levels of TNFalpha observed in obesity, the suppressive effects of TNFalpha on AMPK signaling are reversed in mice null for both TNFR1 and 2 or following treatment with a TNFalpha neutralizing antibody. Our data demonstrate that AMPK is an important TNFalpha signaling target and is a contributing factor to the suppression of fatty-acid oxidation and the development of lipid-induced insulin resistance in obesity.
- Published
- 2006
- Full Text
- View/download PDF
22. Structural basis for glycogen recognition by AMP-activated protein kinase.
- Author
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Polekhina G, Gupta A, van Denderen BJ, Feil SC, Kemp BE, Stapleton D, and Parker MW
- Subjects
- AMP-Activated Protein Kinases, Amino Acid Sequence, Animals, Binding Sites, Binding, Competitive, Carbohydrate Conformation, Catalytic Domain, Crystallography, X-Ray, Glucans pharmacology, Glucose chemistry, Glycogen chemistry, Glycogen genetics, Leucine chemistry, Liver enzymology, Models, Molecular, Molecular Sequence Data, Multienzyme Complexes chemistry, Multienzyme Complexes isolation & purification, Mutagenesis, Site-Directed, Mutation, Oligosaccharides pharmacology, Protein Binding, Protein Serine-Threonine Kinases chemistry, Protein Serine-Threonine Kinases isolation & purification, Protein Structure, Tertiary, Protein Subunits chemistry, Protein Subunits metabolism, Rats, Sequence Homology, Amino Acid, Spectrum Analysis, Raman, Tryptophan chemistry, Water chemistry, beta-Cyclodextrins chemistry, beta-Cyclodextrins metabolism, beta-Cyclodextrins pharmacology, Glycogen metabolism, Multienzyme Complexes metabolism, Protein Serine-Threonine Kinases metabolism
- Abstract
AMP-activated protein kinase (AMPK) coordinates cellular metabolism in response to energy demand as well as to a variety of stimuli. The AMPK beta subunit acts as a scaffold for the alpha catalytic and gamma regulatory subunits and targets the AMPK heterotrimer to glycogen. We have determined the structure of the AMPK beta glycogen binding domain in complex with beta-cyclodextrin. The structure reveals a carbohydrate binding pocket that consolidates all known aspects of carbohydrate binding observed in starch binding domains into one site, with extensive contact between several residues and five glucose units. beta-cyclodextrin is held in a pincer-like grasp with two tryptophan residues cradling two beta-cyclodextrin glucose units and a leucine residue piercing the beta-cyclodextrin ring. Mutation of key beta-cyclodextrin binding residues either partially or completely prevents the glycogen binding domain from binding glycogen. Modeling suggests that this binding pocket enables AMPK to interact with glycogen anywhere across the carbohydrate's helical surface.
- Published
- 2005
- Full Text
- View/download PDF
23. Intrasteric control of AMPK via the gamma1 subunit AMP allosteric regulatory site.
- Author
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Adams J, Chen ZP, Van Denderen BJ, Morton CJ, Parker MW, Witters LA, Stapleton D, and Kemp BE
- Subjects
- AMP-Activated Protein Kinase Kinases, Adenosine Triphosphate metabolism, Amino Acid Sequence, Amino Acid Substitution, Animals, Binding Sites, COS Cells, Chlorocebus aethiops, Conserved Sequence, Enzyme Activation, Glycine metabolism, Hydrogen Bonding, Models, Molecular, Molecular Sequence Data, Mutagenesis, Site-Directed, Phosphorylation, Point Mutation, Protein Binding, Protein Kinases genetics, Protein Structure, Tertiary, Protein Subunits genetics, Sequence Homology, Amino Acid, Adenosine Monophosphate metabolism, Allosteric Site, Protein Kinases chemistry, Protein Kinases metabolism, Protein Subunits chemistry, Protein Subunits metabolism
- Abstract
AMP-activated protein kinase (AMPK) is a alphabetagamma heterotrimer that is activated in response to both hormones and intracellular metabolic stress signals. AMPK is regulated by phosphorylation on the alpha subunit and by AMP allosteric control previously thought to be mediated by both alpha and gamma subunits. Here we present evidence that adjacent gamma subunit pairs of CBS repeat sequences (after Cystathionine Beta Synthase) form an AMP binding site related to, but distinct from the classical AMP binding site in phosphorylase, that can also bind ATP. The AMP binding site of the gamma(1) CBS1/CBS2 pair, modeled on the structures of the CBS sequences present in the inosine monophosphate dehydrogenase crystal structure, contains three arginine residues 70, 152, and 171 and His151. The yeast gamma homolog, snf4 contains a His151Gly substitution, and when this is introduced into gamma(1), AMP allosteric control is substantially lost and explains why the yeast snf1p/snf4p complex is insensitive to AMP. Arg70 in gamma(1) corresponds to the site of mutation in human gamma(2) and pig gamma(3) genes previously identified to cause an unusual cardiac phenotype and glycogen storage disease, respectively. Mutation of any of AMP binding site Arg residues to Gln substantially abolishes AMP allosteric control in expressed AMPK holoenzyme. The Arg/Gln mutations also suppress the previously described inhibitory properties of ATP and render the enzyme constitutively active. We propose that ATP acts as an intrasteric inhibitor by bridging the alpha and gamma subunits and that AMP functions to derepress AMPK activity.
- Published
- 2004
- Full Text
- View/download PDF
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