46 results on '"sample preparation methods"'
Search Results
2. Evaluation of Sample Preparation Methods for the Classification of Children's Ca–Fe–Zn Oral Liquid by Libs.
- Author
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Xie, Weiping, Fu, Gangrong, Xu, Jiang, Zeng, Min, Wan, Qi, Yao, Xiaoying, Yang, Ping, and Yao, Mingyin
- Subjects
- *
LASER-induced breakdown spectroscopy , *SAMPLING methods , *LIQUIDS , *COPPER , *MANUFACTURING processes , *POLYMER liquid crystals - Abstract
Different manufacturers do not produce the same quality of children's Ca–Fe–Zn oral liquid due to different production materials and processes. To improve the phenomenon of counterfeit and imitation oral liquid on the market and effectively monitor its quality, laser-induced breakdown spectroscopy (LIBS) fingerprinting with sample preparation methods can provide a tool for real-time and rapid detection of oral liquids. The sample preparation methods include filter paper adsorption (FPA), filter paper adsorption with elemental Cu (FPA with Cu), adding dropwise to glass slides (ADS), adding dropwise to glass slides with elemental Cu (ADS with Cu), and gel preparation (GP). This work collected LIBS spectrum of oral liquids from eight manufacturers. The model for eXtreme Gradient Boosting (XGBoost) was constructed for classifying oral liquids based on five sample preparation methods. The accuracy was 91.25, 94.17, 55.42, 91.25, and 91.29%, respectively. The results show that the FPA method is more straightforward, efficient, and less affected by the specificity of the color of the sample. Both ADS and GP are susceptible to the color characteristics of the sample and are not well suited to the direct detection of transparent liquids. This work demonstrated that oral liquids could be discriminated by analyzing LIBS spectrum combined with the XGBoost model. Additionally, sample preparation, like the simple FPA method, can improve the accuracy of LIBS classification. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
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3. Methods to Determine Persistent Organic Pollutants in Various Components of Ecosystems in the Far Eastern Region
- Author
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Tsygankov, Vasiliy, Donets, M. M., Gumovskaya, Yu. P., Lyagusha, M. S., Gumovskiy, A. N., Chernyaev, A. P., Negm, Abdelazim M., Series Editor, Chaplina, Tatiana, Series Editor, and Tsygankov, Vasiliy, editor
- Published
- 2023
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- View/download PDF
4. Effects of Sample Preparation Methods on Permeability and Microstructure of Remolded Loess.
- Author
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Ma, Jianquan, Qiu, Yongqiang, Gao, Yanbin, An, Yuke, Duan, Zhao, and Li, Shibo
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LOESS ,SAMPLING methods ,POROSITY ,ELECTRIC conductivity ,MICROSTRUCTURE ,SOIL permeability ,PERMEABILITY - Abstract
To explore the influence of sample preparation methods on the permeability and microstructure of remolded loess, remolded loess collected from Heifangtai was taken as the research object. A total of 40 sets of falling-head permeability tests were conducted using two commonly used sample preparation methods, and five different dry density and four initial water content conditions. Additionally, the electrical conductivity of the leachate and the microscopic structure of the samples were analyzed. The results demonstrate that compared to the transfer wetting method, the homogeneity of samples prepared using the pre-wetting method is inferior. This difference is particularly evident when the initial water content is high. Due to the long duration of the permeability test, the pore structure is prone to change, resulting in relatively higher permeability coefficients. Moreover, the total dissolved solids (TDS) of the leachate exhibit a significant decrease with increasing seepage time, indicating the loss of soluble salts. Microscopic structural analysis reveals that samples prepared using the pre-wetting method exhibit a greater number of large pores and aggregates, which are intrinsic factors contributing to the observed differences in permeability between the two sample preparation methods. Furthermore, it should be noted that the impact of the sample preparation method on the permeability of remolded loess is more significant when the dry density is relatively low (specifically, less than 1.45 g/cm
3 ). Conversely, when the dry density is higher, the influence becomes less pronounced. [ABSTRACT FROM AUTHOR]- Published
- 2023
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5. Current Sample Preparation Methods and Determination Techniques for the Determination of Phthalic Acid Ester Plasticizers in Edible Oils.
- Author
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Qi, Menghui, Li, Yanyan, Zhu, Zheng, Du, Bin, and Chen, Di
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EDIBLE fats & oils , *PHTHALATE esters , *GAS chromatography , *PLASTICIZERS , *PLASTICS , *SAMPLING methods - Abstract
In the process of production, processing, transportation, and storage of edible oils, the oils inevitably come into contact with plastic products. As a result, plasticizers migrate into edible oils, are harmful to human health, and can exhibit reproductive toxicity. Therefore, the determination of plasticizers in edible oils is very important, and a series of sample preparation methods and determination techniques have been developed for the determination of plasticizers in edible oils. Phthalic acid ester (PAE) plasticizers are the most widely used among all plasticizers. This review aims to provide a comprehensive overview of the sample preparation methods and detection techniques reported for the determination of PAEs in edible oils since 2010, focusing on sample preparation methods of edible oils combined with various separation-based analytical techniques, such as gas chromatography (GC) and liquid chromatography (LC) with different detectors. Furthermore, the advantages, disadvantages, and limitations of these techniques as well as the prospective future developments are also discussed. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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6. Neutron Activation Analysis: Application in Bioanalytical Sciences
- Author
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Chajduk, Ewelina, Polkowska-Motrenko, Halina, Buszewski, Bogusław, editor, and Baranowska, Irena, editor
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- 2022
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7. Selected Medicinal Plants as a Source of Biologically Active Compounds
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Ligor, Magdalena, Krakowska-Sieprawska, Aneta, Kiełbasa, Anna, Al-Suod, Hossam Hussein, Buszewski, Bogusław, Skalicka-Woźniak, Krystyna Katarzyna, Section editor, Buszewski, Bogusław, editor, and Baranowska, Irena, editor
- Published
- 2022
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8. Analytics of Antisense Oligonucleotides
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Studzińska, Sylwia, Kilanowska, Anna, Nuckowski, Łukasz, Buszewski, Bogusław, Buszewski, Bogusław, editor, and Baranowska, Irena, editor
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- 2022
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9. Plant Extraction Methods
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Lakshmanan, Mageshwaran, Lakshmanan, Mageshwaran, editor, Shewade, Deepak Gopal, editor, and Raj, Gerard Marshall, editor
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- 2022
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10. Assessment of environmental pollutants at trace levels using ionic liquids-based liquidphase microextraction.
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UZCAN, Furkan, JAGIRANI, Muhammad Saqaf, and SOYLAK, Mustafa
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POLLUTANTS , *ENVIRONMENTAL chemistry , *LIQUID-liquid extraction , *ANALYTICAL chemistry , *MICROPOLLUTANTS , *THERMAL stability , *IONIC liquids - Abstract
Sample preparation is the crucial and most challenging part of analytical chemistry for the speciation of environmental pollutants' traces. Along with the development of the sample preparation methods, the ionic liquid-based microextraction technique plays an important role. Due to the unequivocally unique "green" characteristic of ionic liquids (ILs), they owe their tunable properties, such as highly selective and high reaction efficiency, reusability, and good thermal stability, to present advancements in the sample preparation process. The ionic liquid-based microextraction techniques miniaturize the sample preparation process. Liquid phase microextraction intermediate solvents, desorption solvent extractants, and mediators have been used. They are quoting the benefits and limitations of each method. A few essential sample preparation methods covered the microextraction technique. In this context, miniaturized microextraction methods have been developed. They are generally used for their unlimited positive features, including easy, simple, and environmentally friendly; they also extract inorganic and organic species with low-cost instrumentation. This review advances the sample preparation process using ILs-based liquid phase microextraction as an intermediate solvent, extractant desorption, and mediator solvents. [ABSTRACT FROM AUTHOR]
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- 2022
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11. Ion chromatography: A comprehensive review of sample preparation methods for analysis of halogens and allied nonmetals in critically challenging inorganic matrices.
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Muhammad, Nadeem, Hussain, Irshad, Ali, Amjad, Noureen, Laila, He, Qing, Subhani, Qamar, Khan, Niaz Ali, Cui, Hairong, and Zhu, Yan
- Subjects
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NONMETALS , *COMPLEX matrices , *POLLUTION monitoring , *ION exchange chromatography , *ENVIRONMENTAL sciences - Abstract
• Review of sample preparation methods for halogen IC analysis in inorganic matrices. • Comparison of inorganic sample digestion methods. • Pros and cons of analytical techniques for nonmetals analysis. • The roles, limitations, and prospects of IC in inorganic sample analysis for environmental studies. The inorganic matrices such as metal concentrates, steel, cement, glass, clay, coal, graphite, rocks and sediments, ores etc. play a pivotal role in infrastructure development, transportation, and energy. The presence of non-metallic elements particularly halogens influence their quality, processing cost, and environment dynamics. The analysis of non-metals in such matrices is critically challenging due to their hardness, rigidity, and non-digestibility. This comprehensive review provides a critical comparison of various sample preparation methods in conjunction with pros and cons of advanced techniques for the detection of non-metals in complex matrices, particularly focusing on ion chromatography. Moreover, the review also addresses the challenges related to the enrichment and automation of non-metals analysis. In addition, the previous literature on non-metals determination in diverse range of inorganic matrices has been tabulated for the first time. These insights are intended to guide researchers, quality control analysts, environmental scientists, and policymakers in enhancing pollution monitoring and control strategies. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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12. Analysis of Different Methods of Extracting NSAIDs in Biological Fluid Samples for LC-MS/MS Assays: Scoping Review.
- Author
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Siqueira Sandrin, Viviane Silva, Oliveira, Gabriela Moraes, Weckwerth, Giovana Maria, Polanco, Nelson Leonel Del Hierro, Faria, Flávio Augusto Cardoso, Santos, Carlos Ferreira, and Calvo, Adriana Maria
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LIQUID chromatography-mass spectrometry ,LIQUID-liquid extraction ,SOLID phase extraction ,SCIENCE databases ,WEB databases - Abstract
The aim of this study was to carry out a systematic investigation and analysis of different drug extraction methods, specifically non-steroidal anti-inflammatory drugs in biological fluid samples, for Liquid Chromatography in Mass Spectrometry assays (LC-MS/MS). A search was carried out in the main databases between 1999 and 2021, following the Preferred Reporting Items for Systematic reviews and Meta-Analyses extension for Scoping Reviews (PRISMA-ScR) checklist. Data were obtained through PubMed, Lilacs, Embase, Scopus, and Web of Science databases using the Boolean operators AND and OR. Studies were pre-selected by title and abstract by two independent reviewers. The selected texts were read in full, and only those that were complete and compatible with the inclusion and exclusion criteria were eligible for this research. A total of 248 references were obtained in the databases. After removing the duplicates and analyzing the titles and abstracts, 79 references were evaluated and passed to the next phase, which comprised the complete reading of the article. A total of 39 publications were eligible for this study. In 52% of the studies, the authors used the liquid–liquid extraction method (LLE), while in 41%, the solid-phase extraction method (SPE) was used. A total of 5% used microextraction methods and 2% used less-conventional techniques. The literature on the main methods used, the LLE and SPE methods, is extensive and consolidated; however, we found other studies that reported modifications of these traditional techniques, which were equally validated for use in LC-MS/MS. From this review, it is concluded that the diversity of techniques, reliability, and practical information about each analytical method used in this study can be adapted to advances in LC-MS/MS techniques; however, more ecological, economic, and sustainable approaches should be explored in the future. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
13. Investigation of the Asphalt Binder Sample Preparation Methods Based on AFM
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Wang, Zhijun, Chang, Rong, Zhou, Zhenyu, Qin, Yongchun, Wang, Gaochao, Poulikakos, Lily D., editor, Cannone Falchetto, Augusto, editor, Wistuba, Michael P., editor, Hofko, Bernhard, editor, Porot, Laurent, editor, and Di Benedetto, Hervé, editor
- Published
- 2019
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14. Recent progresses on emerging biosensing technologies and portable analytical devices for detection of food allergens.
- Author
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Zhu, Danqing, Fu, Shiqian, Zhang, Xiru, Zhao, Qianyu, Yang, Xinyan, Man, Chaoxin, Jiang, Yujun, Guo, Ling, and Zhang, Xianlong
- Subjects
- *
SERS spectroscopy , *ALLERGENS , *SURFACE plasmon resonance , *FOOD allergy , *MICROFLUIDIC devices - Abstract
The increasing food allergic cases have posed a great challenge to the human health worldwide. Avoiding the exposure to food allergens is still the only efficient method to prevent food allergic reactions for food allergic sufferers because there are no effective treatments for food allergy up to now. Therefore, it is crucial to develop analytical technologies for rapid and on-site detection of food allergens, helping allergy-prone groups make proper option when buying or eating foods. Recently, various detection technologies and portable analytical devices have been widely developed for rapid, accurate, and on-site screening of food allergens. In this review, first of all, the traditional detection methods were simply introduced and discussed. Then, the latest advances on emerging biosensing technologies (i.e., colorimetric biosensing, fluorescent biosensing, electrochemical biosensing, surface enhanced Raman spectroscopy (SERS) biosensing, surface plasmon resonance (SPR) biosensing, and dual-mode biosensing) and portable analytical devices (such as lateral flow assays (LFAs), microfluidic chips, and paper-based microfluidic devices) for the detection of food allergens were comprehensively summarized. Furthermore, the advantages and weaknesses of these analytical methods for food allergen detection were also compared and discussed. Most importantly, the remaining challenges and chances in this important field were also proposed. Emerging biosensing technologies have shown a great potential in the on-site detection of food allergens. Impressively, the integration of biosensing technologies and portable detection devices (e.g., LFAs, microfluidic chips, and paper-based microfluidic devices) is one of the most promising methods for reliable and on-site detection of food allergens. [Display omitted] • Emerging biosensors and portable analytical devices are promising for food allergen detection. • Food sample preparation methods before food allergen detection were discussed. • Advantages and disadvantages of existing food allergen detection technologies were discussed. • Remaining challenges and chances in this promising field were proposed. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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15. Analysis of Different Methods of Extracting NSAIDs in Biological Fluid Samples for LC-MS/MS Assays: Scoping Review
- Author
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Viviane Silva Siqueira Sandrin, Gabriela Moraes Oliveira, Giovana Maria Weckwerth, Nelson Leonel Del Hierro Polanco, Flávio Augusto Cardoso Faria, Carlos Ferreira Santos, and Adriana Maria Calvo
- Subjects
liquid chromatography ,liquid–liquid extraction ,mass spectrometry ,sample preparation methods ,Microbiology ,QR1-502 - Abstract
The aim of this study was to carry out a systematic investigation and analysis of different drug extraction methods, specifically non-steroidal anti-inflammatory drugs in biological fluid samples, for Liquid Chromatography in Mass Spectrometry assays (LC-MS/MS). A search was carried out in the main databases between 1999 and 2021, following the Preferred Reporting Items for Systematic reviews and Meta-Analyses extension for Scoping Reviews (PRISMA-ScR) checklist. Data were obtained through PubMed, Lilacs, Embase, Scopus, and Web of Science databases using the Boolean operators AND and OR. Studies were pre-selected by title and abstract by two independent reviewers. The selected texts were read in full, and only those that were complete and compatible with the inclusion and exclusion criteria were eligible for this research. A total of 248 references were obtained in the databases. After removing the duplicates and analyzing the titles and abstracts, 79 references were evaluated and passed to the next phase, which comprised the complete reading of the article. A total of 39 publications were eligible for this study. In 52% of the studies, the authors used the liquid–liquid extraction method (LLE), while in 41%, the solid-phase extraction method (SPE) was used. A total of 5% used microextraction methods and 2% used less-conventional techniques. The literature on the main methods used, the LLE and SPE methods, is extensive and consolidated; however, we found other studies that reported modifications of these traditional techniques, which were equally validated for use in LC-MS/MS. From this review, it is concluded that the diversity of techniques, reliability, and practical information about each analytical method used in this study can be adapted to advances in LC-MS/MS techniques; however, more ecological, economic, and sustainable approaches should be explored in the future.
- Published
- 2022
- Full Text
- View/download PDF
16. Mouse single oocyte imaging by MALDI-TOF MS for lipidomics.
- Author
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Bodzon-Kulakowska, Anna, Arena, Roberta, Mielczarek, Przemyslaw, Hartman, Kinga, Kozoł, Paulina, Gibuła-Tarlowska, Ewa, Wrobel, Tomasz P., Gąsior, Łukasz, Polański, Zbigniew, Ptak, Grazyna E., and Suder, Piotr
- Abstract
Reproductive cells are a very special kind of material for the analysis. Depending on the species, their dimensions allow for the application of mass spectrometry imaging-based techniques to receive a reasonable data for interpretation of their condition without any additional sample preparation steps, except for typical sample preparation characteristic for IMS protocols. A comparison between lipid profiles of oocytes could answer the question of the overall quality of the cells in the function of time or conditions of storage. Even tiny differences in the lipid profiles, but still detectable by bioinformatic analysis, could be crucial for the estimation of the conditions of the cells in various stages of development or aging. In our study, MALDI-TOF/TOF MSI was used to analyze and visualize the single oocytes. We deposited the cells on the transparent indium-tin-oxide (ITO) glass and marked their positions, which allowed for the fast localization of the cells and precise laser targeting in the ion source. We also optimized the usage of different MALDI matrices and different approaches. The proposed way of measurement allows analyzing quite a significant quantity of oocytes in a reasonably short time. During the analysis, the lipid composition of the single cell was successfully estimated in a conventional usage of the MALDI ion source, and the localization of lipids was confirmed by imaging mass spectrometry (IMS) analysis. The observed quantity of the lipids allowed for the application of the LIFT™ technique to obtain MS/MS spectra sufficient for lipids' unambiguous identification. We hope that our idea of the oocyte analysis will help to elucidate chemical changes that accompany different processes in which oocytes are involved. There could be such fascinating phenomena as the oocyte maturation, changes in the lipid components during their storage, and much more. [ABSTRACT FROM AUTHOR]
- Published
- 2020
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17. 保健食品中非法添加药物检测技术研究进展.
- Author
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庞小莲 and 黎 强
- Abstract
Copyright of Journal of Food Safety & Quality is the property of Journal of Food Safety & Quality Editorial Department and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
- Published
- 2020
18. Proposed automated contrast-enhanced microscopical method for evaluating air void structure in compacted asphalt concrete mixtures.
- Author
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Beyene, Mengesha, Elwardany, Michael, Youtcheff, Jack, Mensching, David, and Myers, Leslie
- Subjects
- *
ASPHALT pavements , *CYCLIC fatigue , *MATERIALS testing , *SPECIFIC gravity , *ASPHALT concrete , *AIR analysis , *ASPHALT , *MIXTURES - Abstract
There is no direct, less expensive, and practical method to measure the interconnectivity and parameters of air voids in asphalt mixtures other than the total air void volume calculated traditionally using bulk and maximum theoretical specific gravities. Unlike the conventional method, this paper proposes a method that is suitable for advanced applications and studies, such as for the evaluation of air void distribution and air void gradient to model and simulate long-term aging, predict top-down fatigue cracking, evaluate the effectiveness of compaction of thick lifts, and satisfy the representative volume element (RVE) requirements (a homogenous and representative specimen) for performance tests. Developing the proposed compact asphalt evaluation method included modifying the sample preparation methods and analysis from the American Society of Testing & Materials (ASTM), C457 Method C, and recently applied in the analyses of two independent studies at the Federal Highway Administration (FHWA). The first study was focused on checking the air void distribution within the small specimen for dynamic modulus and uniaxial cyclic fatigue tests using AASHTO TP 132 and TP 133, respectively. Results of air void analyses conducted on the interior and exterior sides of several slices sawn from different compacted asphalt mixtures consistently showed that the air void contents on the external sides are higher than on the interior. The second study was to evaluate whether the thicker-than-typical lift thickness to nominal maximum aggregate (NMAS) ratio was causing any top-to-bottom air void gradient in the pavement. Results showed that air void sizes and contents are consistently higher along the top ends of all the cores, and the total air void contents measured using the new method on several specimens from the field were comparable with the indirectly calculated air void percent with up to ± 0.4 percent random error. Overall, the new method is practical to apply to larger-size samples and is a tool that both agencies and contractors can use for confirming in situ void uniformity. Its application can support innovations and improve performance in asphalt pavement construction. • A reliable sample preparation procedure was developed that is applicable to compacted asphalt mixtures. • Results of air void contents measured using the quantitative petrographic method were comparable with the AASHTO Methods. • The method also provides information on void sizes, abundance, distribution, and air void gradients in asphalt pavement. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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19. Separation Sciences in Poland
- Author
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Bogusław Buszewski
- Subjects
history of chromatography and related techniques ,interwar period ,post-war chromatography development ,sample preparation methods ,chemometrics ,compressed techniques ,Physics ,QC1-999 ,Chemistry ,QD1-999 - Abstract
This paper describes the most significant achievements related to the creation and development of separation methods. Tswiett Nerst’s achievements and the role of such centers as Lublin, Warsaw, Gdańsk, Poznań, Łódź, Silesia, Kraków and Toruń are presented, as well as the role of leaders who created theories and methodological studies on chromatography and related techniques. The role of sample preparation methods is emphasized based on the same or similar theoretical foundations. The directions of developing these techniques in Poland today and in the future are presented.
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- 2022
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20. Analysis of Endocrine Disrupting Chemicals in Food Samples
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Moreira, Miriany A., André, Leiliane C., da Silva, Marco D. R. Gomes, Cardeal, Zenilda L., Ribeiro, Alexandra B., editor, Mateus, Eduardo P., editor, and Couto, Nazaré, editor
- Published
- 2016
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- View/download PDF
21. Progress of Niobium and Tantalum Analytical Technology
- Author
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LI Gang, YAO Yu-ling, LI Jing-yi, ZHAO Chao-hui, LUO Tao, and LI Chong-ying
- Subjects
niobium ,tantalum ,sample preparation methods ,inductively coupled plasma-optical emission spectrometry/mass spectrometry ,x-ray fluorescence spectrometry ,neutron activation analysis ,Geology ,QE1-996.5 ,Ecology ,QH540-549.5 - Abstract
As strategic emerging mineral resources supported by the state, niobium and tantalum are the functional and structural materials needed for the development of emerging industries. Therefore, conducting research on the determination of niobium and tantalum in related materials is of great significance. Unfortunately, niobium and tantalum have similar physical and chemical properties, making it difficult to separate them. However, they are easy to hydrate. Geological samples are difficult to be decomposed, thus the determination of niobium and tantalum has always been a difficult issue. Sample pre-treatment technology and modern analytical techniques are reviewed in this paper. Sample pre-treatment is the key step for niobium and tantalum analysis, therefore a suitable sample digestion and preconcentration method combined with analytical methods and sample characteristics is the premise of accurate determination of niobium and tantalum. Instrument analysis is the mainstream of modern analytical technology. Inductively Coupled Plasma-Optical Emission Spectrometry (ICP-OES) and Inductively Coupled Plasma-Mass Spectrometry (ICP-MS) are the most widely used methods for the determination of niobium and tantalum, but it is necessary to solve problems such as coexisting component interference, matrix effects and salt influence. Laser Ablation (LA), X-ray Fluorescence Spectrometry (XRF), and Neutron Activation Analysis (NAA) are the development direction of tantalum and niobium analysis, due to the fact that they avoid the complicated sample pre-treatment and addition of impurities by solid sample introduction.
- Published
- 2018
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22. Diagnostic Aspects of Paraquat in the Forensic Toxicology: A Systematic Review.
- Author
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Reihani A, Marboutian F, Aghebat-Bekheir S, Reyhani A, and Akhgari M
- Abstract
Background: Paraquat (N, N-dimethyl-4,4-bipyridinium dichloride) is a nonselective, fast-acting, and contact chemical herbicide used extensively for weed control. It has high acute oral toxicity, the ability to accumulate in the lungs, and a high potential for pulmonary fibrosis after its intoxication. The present systematic review focuses on evaluating diagnostic aspects of paraquat (PQ) in forensic toxicology., Methods: Evaluation of the literature according to the following criteria: only human studies published from February 1971 to March 2022 which are in English on the following databases: 1) Medline/PubMed/MeSH search words: ((Methyl viologen [Title/Abstract]) OR (paraquat [MeSH Terms])) AND (forensic [Title/Abstract]); 2) Scopus Keywords related to the study aim included forensic toxicology, paraquat, Methyl viologen; 3) Web of Science. Keywords related to the study aim included forensic toxicology, paraquat, and Methyl viologen., Results: Thirty full-text articles were included. The results of our review indicate plasma and urine are more used for identifying PQ, and liver, lung, and gastric fluid are important in postmortem cases. Preparation methods, including liquid-liquid extraction (LLE), solid-phase extraction, and acetonitrile-precipitated protein, are often required for removing interfering substances. Chromatographic methods, among other analytical techniques, are more sensitive, specific, and applicable., Conclusion: Our review suggests that plasma, urine, and lungs should be prioritized in sampling. Solid-phase extraction has better recovery than LLE in many samples. Colorimetric methods are not used much today, and radioimmunoassay (RIA) has limited application despite its high sensitivity. Gas and liquid chromatography methods appear to offer the best approach for the analysis of PQ., Competing Interests: All authors disclosed a financial and personal relationship with other people or organizations that could inappropriately influence (bias) their work., (© The Author(s) 2023.)
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- 2024
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23. Behind the Organic Veil: Assessing the Impact of Chemical Deflocculation on Organic Content Reduction and Lacustrine Arcellinida (Testate Amoebae) Analysis.
- Author
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Nasser, Nawaf A., Gregory, Braden R. B., Steele, Riley E., Patterson, R. Timothy, and Galloway, Jennifer M.
- Subjects
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ORGANIC compounds , *LAKE sediments , *SODIUM carbonate , *POTASSIUM hydroxide , *AMOEBA - Abstract
Arcellinida (testate lobose amoebae) are widely used as bio-indicators of lacustrine environmental change. Too much obscuring organic material in a gridded wet Petri dish preparation makes it difficult to observe all specimens present and slows quantification as the organic material has to be carefully worked through with a dissection probe. Chemical deflocculation using soda ash (Na2CO3·H2O), potassium hydroxide (KOH), or sodium hexametaphosphate ((NaPO3)6) has previously been shown to disaggregate and reduce organic content in lake sediments, but to date, no attempt has been made to comparatively evaluate the efficiency of these deflocculants in disaggregating organic content and their impact on Arcellinida analysis in lacustrine sediments. Here, we assess the effectiveness of soda ash, potassium hydroxide, and sodium hexametaphosphate treatments on removing organic content and the impact of those digestions on Arcellinida preservation in 126 sample aliquots subdivided from three sediment samples (YK-20, YK-25, and YK-57) collected from three lakes near Yellowknife, Northwest Territories, Canada. Following treatment, cluster analysis and Bray-Curtis dissimilarity matrix (BCDM) were utilized to determine whether treatments resulted in dissolution-driven changes in Arcellinida assemblage composition. Observed Arcellinida tests in aliquots increased drastically after treatment of organic-rich samples (47.5–452.7% in organic-rich aliquots and by 14.8% in aliquots with less organic matter). The BCDM results revealed that treatment with 5% KOH resulted in the highest reduction in observed organic content without significantly affecting Arcellinida assemblage structure, while soda ash and sodium hexametaphosphate treatments resulted in marginal organic matter reduction and caused severe damage to the arcellinidan tests. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
24. Determination of the Total Microbial Abundance in Black Sea Bottom Sediments Using Flow Cytometry.
- Author
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Rylkova, O. A., Gulin, S. B., and Pimenov, N. V.
- Subjects
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FLOW cytometry , *SEDIMENTS , *BACTERIAL cells , *COASTAL sediments , *CHEMICAL reagents , *DEEP-sea corals - Abstract
The known approaches to sample preparation have been improved to achieve a more complete detection of microorganisms of the Black Sea bottom sediments using flow cytometry of SYBR Green I-stained cells. Total microbial abundance in the samples from the shelf and deep-sea sediments varied from 0.03 to 1.54 × 108 cells g–1 and from 0.002 to 1.24 × 108 cells g–1 dry weight, respectively. This is comparable to the data reported previously for various areas of the oceans, including the Black Sea. Application of sodium pyrophosphate was shown to be the most universal method for treating sediments of various types; along with this, using hydrofluoric acid is possible for the deep-sea reduced sediments, whereas treatment with methanol was preferable for the sediments of coastal waters with a normal degree of aeration of the bottom layer. For samples of various types, optimal sample preparation procedures were proposed (choice of chemical reagent, mode of ultrasonic processing and centrifugation, and additional washing procedures). These procedures resulted in significantly more efficient enumeration of bacterial cells, while application of flow cytometry ensured rapid determination of the total number of microorganisms in the bottom sediments. [ABSTRACT FROM AUTHOR]
- Published
- 2019
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- View/download PDF
25. Evaluation of sample preparation methods for rice geographic origin classification using laser-induced breakdown spectroscopy.
- Author
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Yang, Ping, Zhu, Yining, Yang, Xinyan, Li, Jiaming, Tang, Shisong, Hao, Zhongqi, Guo, Lianbo, Li, Xiangyou, Zeng, Xiaoyan, and Lu, Yongfeng
- Subjects
- *
RICE quality , *RICE -- Nutrition , *FOOD inspection , *RICE processing , *LASER-induced breakdown spectroscopy , *CHEMOMETRICS - Abstract
The quality and safety of food is one of the most important issues in our life. In this work, four different sample preparation methods, i.e., rice powder pellet with boric acid (RPPBA), rice powder pellet (RPP), rice grain pellet (RGP) and rice grain (RG), were carried out to study the adulteration problem in food industry. 20 kinds of rice from different geographic origins were classified by laser-induced breakdown spectroscopy (LIBS) coupled with principal component analysis (PCA) and support vector machine (SVM). PCA was used to reduce the input variables of SVM, and the classification accuracies by PCA and SVM combination for the four sample preparation methods were 92.70%, 95.70%, 98.80%, and 99.20%, respectively. In addition, the sample preparation times were 15, 12, 10, and 1 min, respectively. These results show that RG was simpler and more efficient sample preparation method for distinguishing different geographical origin of agricultural products than the other preparing methods of RPPBA, RPP, and RG. Modeling efficiency of SVM could be improved by reducing its input variables using PCA. It can be concluded that the LIBS technique combined with chemometric method should be a promising tool to rapidly distinguish different rice geographic origins. [ABSTRACT FROM AUTHOR]
- Published
- 2018
- Full Text
- View/download PDF
26. GC vs. HPLC in quantitation of CBD, CBG, ∆9-THC and CBN in plasma using different sample preparation methods.
- Author
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Dybowski, Michal P., Dawidowicz, Andrzej L., Rombel, Michal, and Typek, Rafal
- Subjects
- *
CANNABIDIOL , *SAMPLING methods , *HIGH performance liquid chromatography , *CHROMATOGRAPHIC analysis , *MATRIX effect - Abstract
The sensitivity of complex analytical procedures depends not only on the sensitivity of the analytical instrument used, but also on the recovery degree of the examined analyte by the employed sample preparation method. The recovery degrees of individual cannabinoids reported in literature, estimated using the same sample preparation method, are unexpectedly divergent. Therefore, the aim of this study was a thorough assessment of the most commonly used sample preparation methods, such as protein precipitation, LLE, QuEChERS and SPE, in the context of the reliability of the obtained results. The presented report shows that the highest sensitivity, precision and reliability of the chromatographic analysis of CBG, CBD, ∆9-THC and CBN in human plasma can be obtained using SPE. The recovery degrees of these cannabinoids by SPE are highly repeatable and exceed 95 %, while they are significantly lower for such sample preparation methods as protein precipitation, LLE and QuEChERS (ca. 80, 65 and 87, respectively). Moreover, the supernatants obtained by the latter methods contain interferents evoking matrix-effect, which makes reliable quantification of the listed cannabinoids by GC difficult. To our knowledge, the paper is the first such extensive comparison of sample preparation procedures used for the determination of cannabinoids in plasma by GC-MS and HPLC-MS. The presented results and the discussion allow to understand why different recovery degrees for the same xenobiotic can be find in literature despite they have been estimated using the same or different sample preparation method or different chromatography types. [Display omitted] • Analyte recovery degree as a key factor in analytical procedure of complex mixtures. • SPE gives almost 100 % recovery of cannabinoids from blood plasma. • SPE allows for reliable analysis of cannabinoids in blood/plasma by GC and HPLC. • Plasma LLE and QuEChERS supernatants contain interferents evoking matrix effect in GC. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
27. Sample preparation strategies for mass spectrometry analysis in human exposome research: Current status and future perspectives.
- Author
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Gu, Yunyun, Peach, Jesse T., and Warth, Benedikt
- Subjects
- *
EXTRACTION techniques , *LIQUID chromatography-mass spectrometry , *SOLID phase extraction , *HUMAN experimentation , *SAMPLING (Process) , *MATRIX effect , *MASS spectrometry , *TANDEM mass spectrometry - Abstract
The exposome is the measure of total environmental exposures and has a significant impact on human health outcomes. Exposomics research typically examines complex biological samples and assesses 100s to 1,000s of small molecules associated with chemical exposure events. To acquire robust and comprehensive datasets encompassing a broad range of multi-class biomarkers of chemical exposures, high-resolution and tandem mass spectrometry have emerged as the preferred analytical tools in the field. Due to matrix effects and interferences associated with complex biological samples together with the presence of very low abundance analytes, sensitivity and reproducibility have plagued exposomic studies. This is especially true for large sample sets where adequate robustness is frequently lacking. A possible solution to this problem is the development of non-discriminatory sample preparation methods which can reduce interferences while increasing sensitivity and reproducibility. However, sample preparation techniques intrinsically result in a discrete loss of analytes leading to the outstanding analytical challenge of finding a proper balance. Therefore, approaches which decrease matrix interferences while preserving broad chemical coverage need to be developed. In this review, sample preparation procedures currently applied in exposome research and related fields are summarized and critically evaluated. This includes a comparison of advantages and limitations between different techniques such as solid-phase extraction, liquid extraction, QuEChERS, filters and dilute and shoot with a liquid chromatography-mass spectrometry analysis focus. Based on this evaluation, recommendations promoting balanced strategies for sample preparation in future exposome research applications are provided. • Current sample preparation techniques applied in mass spectrometry-based exposomics research are reviewed. • Challenges and advantages of available sample preparation methods are discussed. • Results from recent publications are compiled by analytical method, chemical coverage and performance. • Strategies are recommended for further research and application in future exposomics studies. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
28. Evaluation and Refinement of Sample Preparation Methods for Extracellular Matrix Proteome Coverage
- Author
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Monika Dzieciatkowska, Lauren R. Schmitt, Toin H. van Kuppevelt, Willeke F. Daamen, Mark Maslanka, Ryan C. Hill, Maxwell C. McCabe, Kirk C. Hansen, and Danique J. Hof
- Subjects
collagen ,glycoprotein ,K2CO3, potassium carbonate ,Male ,Proteomics ,Proteome ,PSM, peptide spectral match ,Gnd-HCl, guanidine hydrochloride ,VitC, ascorbic acid ,GAG, glycosaminoglycan ,R/A, reduction and alkylation ,Biochemistry ,Analytical Chemistry ,Extracellular matrix ,NaCl, sodium chloride ,Protein purification ,NP-40, Nonidet-P40 ,Sample preparation ,ABC, ammonium bicarbonate ,FA, formic acid ,0303 health sciences ,Extracellular Matrix Proteins ,Decellularization ,Chemistry ,030302 biochemistry & molecular biology ,Technological Innovation and Resources ,MgCl2, magnesium chloride ,CAISU, chaotrope-assisted in-solution digest with ultrasonication ,ECM, extracellular matrix ,Extracellular Matrix ,WMP, whole mouse powder ,Reconstructive and regenerative medicine Radboud Institute for Molecular Life Sciences [Radboudumc 10] ,Tris-HCl, Tris(hydroxymethyl)aminomethane hydrochloride ,EUP, exclusive unique peptides ,IAM, iodoacetamide ,SDS, sodium dodecyl sulfate ,FDR, false discovery rate ,Pipes, piperazine-N,N′-bis(2-ethanesulfonic acid) ,CA, caffeic acid ,Computational biology ,CAIS, chaotrope-assisted in-solution digest ,CHAPS, 3-[(3-cholamidopropyl)dimethylammonio]-1-propanesulfonate ,PI, protease inhibitor ,TFA, trifluoroacetic acid ,03 medical and health sciences ,Animals ,Molecular Biology ,030304 developmental biology ,proteoglycan ,matrisome ,EDTA, ethylenediaminetetraacetic acid ,Extraction (chemistry) ,LC-MS/MS, liquid chromatography tandem mass spectrometry ,SPEED, sample preparation by easy extraction and digestion ,HEPES, 4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid ,sample preparation methods ,GA, gallic acid ,ACN, acetonitrile ,Ascorbic acid ,timsTOF, trapped ion mobility spectroscopy time-of-flight ,Mice, Inbred C57BL ,MS, mass spectrometry ,DTT, dithiothreitol ,NaOV, sodium orthovanadate ,Extraction methods ,CV, coefficient of variance ,HA, hydroxylamine hydrochloride ,SCAD, surfactant and chaotropic agent-assisted sequential extraction/on-pellet digestion ,DOC, sodium deoxycholate ,KCl, potassium chloride - Abstract
The extracellular matrix is a key component of tissues, yet it is underrepresented in proteomic datasets. Identification and evaluation of proteins in the extracellular matrix (ECM) has proved challenging due to the insolubility of many ECM proteins in traditional protein extraction buffers. Here we separate the decellularization and ECM extraction steps of several prominent methods for evaluation under real-world conditions. The results are used to optimize a two-fraction ECM extraction method. Approximately one dozen additional parameters are tested, and recommendations for analysis based on overall ECM coverage or specific ECM classes are given. Compared with a standard in-solution digest, the optimized method yielded a fourfold improvement in unique ECM peptide identifications., Graphical abstract, Highlights • Decellularization drastically improves ECM coverage. • ECM coverage is the highest with a dual chemical/enzymatic digestion method. • SPEED is the best tested single-shot method for ECM identification. • A fourfold improvement in ECM peptide IDs was achieved compared with standard methods., Due to their insolubility, many extracellular matrix (ECM) proteins are resistant to typical extraction and require optimized extraction methods for proteomic analysis. A wide variety of decellularization and ECM extraction methods have been published, but it remains unclear how these methods perform compared with one another on a complex, ECM-rich sample. A direct comparison of both cell and ECM extraction methods on a whole organism sample and four additional organs serves as a reference for future ECM proteomics.
- Published
- 2021
29. On sample preparation methods for fermented beverage VOCs profiling by GCxGC-TOFMS
- Author
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Zhang, Penghan, Carlin, Silvia, Lotti, Cesare, Mattivi, Fulvio, and Vrhovsek, Urska
- Published
- 2020
- Full Text
- View/download PDF
30. Optimization of Sample Preparation in the Determination of Minerals and Trace Elements in Honey by ICP-MS.
- Author
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Leme, Ana, Bianchi, Silmara, Carneiro, Renato, and Nogueira, Ana
- Abstract
In this paper, analytical procedures are proposed for determination of inorganic constituents in honey samples from different regions of Brazil. Inductively coupled plasma with mass spectrometry detection (ICP-MS) was used to determine the analytes, using two different sample preparation methods: acid mineralization in block digester and microwave-assisted acid digestion. The methods were optimized in order to minimize the final acidity and the residual carbon content after the sample preparation. It was observed that mineralization using microwave radiation with 2 mol L HNO was the most suitable method for determination of minerals and trace elements by ICP-MS. Besides, Se, Mg, Ca, Al, P, Mn, Fe, Cu, Zn, Ba, and Pb were determined in 60 honey samples by ICP-MS. The appropriate instrumental conditions were also evaluated for this determination, as the need of the use of collision-reaction interface and internal standards. The accuracies were evaluated using two certified reference materials, and the recoveries ranged from 82 to 115 %. The results showed no evidence of contamination in the honey samples analyzed. [ABSTRACT FROM AUTHOR]
- Published
- 2014
- Full Text
- View/download PDF
31. MALDI imaging mass spectrometry of β- and γ-crystallins in the ocular lens
- Author
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Anderson, David M., Nye-Wood, Mitchell G., Rose, Kristie L., Donaldson, Paul J., Grey, Angus C., Schey, Kevin L., Anderson, David M., Nye-Wood, Mitchell G., Rose, Kristie L., Donaldson, Paul J., Grey, Angus C., and Schey, Kevin L.
- Abstract
Lens crystallin proteins make up 90% of expressed proteins in the ocular lens and are primarily responsible for maintaining lens transparency and establishing the gradient of refractive index necessary for proper focusing of images onto the retina. Age-related modifications to lens crystallins have been linked to insolubilization and cataractogenesis in human lenses. Matrix-assisted laser desorption/ionization (MALDI) imaging mass spectrometry (IMS) has been shown to provide spatial maps of such age-related modifications. Previous work demonstrated that, under standard protein IMS conditions, α-crystallin signals dominated the mass spectrum and age-related modifications to α-crystallins could be mapped. In the current study, a new sample preparation method was optimized to allow imaging of β- and γ-crystallins in ocular lens tissue. Acquired images showed that γ-crystallins were localized predominately in the lens nucleus whereas β-crystallins were primarily localized to the lens cortex. Age-related modifications such as truncation, acetylation, and carbamylation were identified and spatially mapped. Protein identifications were determined by top-down proteomics analysis of lens proteins extracted from tissue sections and analyzed by LC-MS/MS with electron transfer dissociation. This new sample preparation method combined with the standard method allows the major lens crystallins to be mapped by MALDI IMS. © 2019 John Wiley & Sons, Ltd.
- Published
- 2020
32. Analytical methods for the determination of halogens in bioanalytical sciences: a review.
- Author
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Mello, Paola, Barin, Juliano, Duarte, Fabio, Bizzi, Cezar, Diehl, Liange, Muller, Edson, and Flores, Erico
- Subjects
- *
HALOGENS , *FLUORINE , *CHLORINE , *BROMINE , *MATRICES (Mathematics) , *DRUGS , *PYROHYDROLYSIS - Abstract
Fluorine, chlorine, bromine, and iodine have been studied in biological samples and other related matrices owing to the need to understand the biochemical effects in living organisms. In this review, the works published in last 20 years are covered, and the main topics related to sample preparation methods and analytical techniques commonly used for fluorine, chlorine, bromine, and iodine determination in biological samples, food, drugs, and plants used as food or with medical applications are discussed. The commonest sample preparation methods, as extraction and decomposition using combustion and pyrohydrolysis, are reviewed, as well as spectrometric and electroanalytical techniques, spectrophotometry, total reflection X-ray fluorescence, neutron activation analysis, and separation systems using chromatography and electrophoresis. On this aspect, the main analytical challenges and drawbacks are highlighted. A discussion related to the availability of certified reference materials for evaluation of accuracy is also included, as well as a discussion of the official methods used as references for the determination of halogens in the samples covered in this review. [Figure not available: see fulltext.] [ABSTRACT FROM AUTHOR]
- Published
- 2013
- Full Text
- View/download PDF
33. Comparison of sample preparation methods for stable isotope analysis of dissolved sulphate in forested watersheds.
- Author
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Kang, Phil-Goo, Mayer, Bernhard, and Mitchell, Myron J.
- Subjects
- *
ISOTOPES , *STABLE isotope analysis , *SULFATES , *SULFUR , *WATERSHEDS - Abstract
Pretreatment methods for measuring stable sulphur (δ34S) and oxygen (δ18O) isotope ratios of dissolved sulphate from watersheds have evolved throughout the last few decades. The current study evaluated if there are differences in the measured stable S and O isotope values of dissolved sulphate from forested watersheds when pretreated using three different methods: Method 1 (M1): adsorb sulphate on anion exchange resins and send directly to isotope facility; Method 2 (M2): adsorb sulphate on anion exchange resins, extract sulphate from anion exchange resins, and send the produced BaSO4 to the isotope facility; and Method 3 (M3): directly precipitate BaSO4 without anion exchange resins with the precipitates being sent to the isotope facility. We found an excellent agreement of the δ34Ssulphate values among all the three methods. However, some differences were observed in the δ18Osulphate values (M1 versus M2:−1.5 ‰; M1 versus M3:−1.2 ‰) associated with possible O contamination before isotope measurement. Several approaches are recommended to improve the pretreatment procedures for δ18Osulphate analysis. [ABSTRACT FROM AUTHOR]
- Published
- 2012
- Full Text
- View/download PDF
34. Application of PLE for the determination of essential oil components from Thymus vulgaris L.
- Author
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Dawidowicz, Andrzej L., Rado, Ewelina, Wianowska, Dorota, Mardarowicz, Marek, and Gawdzik, Jan
- Subjects
- *
PLANTS , *MEDICINE , *ESSENTIAL oils , *CHEMICAL sample preparation , *HISTORY - Abstract
Abstract: Essential plants, due to their long presence in human history, their status in culinary arts, their use in medicine and perfume manufacture, belong to frequently examined stock materials in scientific and industrial laboratories. Because of a large number of freshly cut, dried or frozen plant samples requiring the determination of essential oil amount and composition, a fast, safe, simple, efficient and highly automatic sample preparation method is needed. Five sample preparation methods (steam distillation, extraction in the Soxhlet apparatus, supercritical fluid extraction, solid phase microextraction and pressurized liquid extraction) used for the isolation of aroma-active components from Thymus vulgaris L. are compared in the paper. The methods are mainly discussed with regard to the recovery of components which typically exist in essential oil isolated by steam distillation. According to the obtained data, PLE is the most efficient sample preparation method in determining the essential oil from the thyme herb. Although co-extraction of non-volatile ingredients is the main drawback of this method, it is characterized by the highest yield of essential oil components and the shortest extraction time required. Moreover, the relative peak amounts of essential components revealed by PLE are comparable with those obtained by steam distillation, which is recognized as standard sample preparation method for the analysis of essential oils in aromatic plants. [Copyright &y& Elsevier]
- Published
- 2008
- Full Text
- View/download PDF
35. Determination of Glimepiride in Human Plasma by LC-MS-MS and Comparison of Sample Preparation Methods for Glimepiride.
- Author
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Kim, Hohyun, Chang, Kyu Young, Park, Chang Hun, Jang, Moon Sun, Lee, Jung-Ae, Lee, Hee Joo, and Lee, Kyung Ryul
- Abstract
A sensitive and selective method for quantitation of glimepiride in human plasma was established using liquid chromatography-electrospray ionization tandem mass spectrometry. Three different methods for the sample preparation of glimepiride and an internal standard were investigated (liquid-liquid extraction, solid-phase extraction and protein precipitation). Glipizide was used as an internal standard. Compounds were separated on a C
18 column with 80% acetonitrile and 20% deionized water (adjusted to pH 3.5 with acetic acid), as mobile phase at a flow rate of 200 μL min−1 . By use of multiple reaction monitoring mode in MS-MS with liquid-liquid extraction and solid-phase extraction, glimepiride and glipizide were detected without severe interference from the human plasma matrix. Glimepiride produced a protonated precursor ion ([M+H]+ ) at m/z 491 and a corresponding product ion at m/z 352, and the internal standard produced a protonated precursor ion ([M+H]+ ) at m/z 446 and a corresponding product ion at m/z 321. The limit of quantitation was 0.1 ng mL−1 , 0.5 ng mL−1 and 1.0 ng mL−1 when using liquid-liquid extraction, solid-phase extraction and protein precipitation, respectively. The validation, reproducibility, stability, and recovery of the different sample preparation methods were comparable and all the methods gave reliable results. The method has been successfully applied to pharmacokinetic study of glimepiride in human plasma. [ABSTRACT FROM AUTHOR]- Published
- 2004
- Full Text
- View/download PDF
36. On sample preparation methods for fermented beverage VOCs profiling by GCxGC-TOFMS
- Author
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Penghan Zhang, Urska Vrhovsek, Silvia Carlin, Fulvio Mattivi, and Cesare Lotti
- Subjects
Settore CHIM/01 - CHIMICA ANALITICA ,Endocrinology, Diabetes and Metabolism ,Clinical Biochemistry ,02 engineering and technology ,01 natural sciences ,Biochemistry ,Gas Chromatography-Mass Spectrometry ,Specimen Handling ,Sample preparation ,Solid phase extraction ,Two dimensional gas chromatography–mass spectrometry ,Solid Phase Microextraction ,Wine ,Volatile Organic Compounds ,Chromatography ,Fermented beverages ,Sample preparation methods ,VOC profiling ,Two dimensional gaschromatography–mass spectrometry ,Chemistry ,010401 analytical chemistry ,021001 nanoscience & nanotechnology ,0104 chemical sciences ,13. Climate action ,Comprehensive two-dimensional gas chromatography ,Fermentation ,Odorants ,Mass spectrum ,Original Article ,Gas chromatography ,Time-of-flight mass spectrometry ,Fermented Foods ,0210 nano-technology - Abstract
Introduction Aromas and tastes have crucial influences on the quality of fermented beverages. The determination of aromatic compounds requires global non-targeted profiling of the volatile organic compounds (VOCs) in the beverages. However, experimental VOC profiling result depends on the chosen VOC collection method. Objectives This study aims to observe the impact of using different sample preparation techniques [dynamic headspace (DHS), vortex-assisted liquid–liquid microextraction (VALLME), multiple stir bar sorptive extraction (mSBSE), solid phase extraction (SPE), and solid phase micro-extraction (SPME)] to figure out the most suitable sample preparation protocol for profiling the VOCs from fermented beverages. Methods Five common sample preparation methods were studied with beer, cider, red wine, and white wine samples. After the sample preparation, collected VOCs were analyzed by two-dimensional gas chromatography coupled with time of flight mass spectrometry (GCxGC-TOFMS). Results GCxGC oven parameters can be optimized with the Box–Behnken surface response model and response measure on peak dispersion. Due to the unavoidable column and detector saturation during metabolomic analysis, errors may happen during mass spectrum construction. Profiling results obtained with different sample preparation methods show considerable variance. Common findings occupy a small fraction of total annotated VOCs. For known fermentative aromas, best coverage can be reached by using SPME together with SPE for beer, and VALLME for wine and cider. Conclusions GCxGC-TOFMS is a promising tool for non-targeted profiling on VOCs from fermented beverages. However, a proper data processing protocol is lacking for metabolomic analysis. Each sample preparation method has a specific profiling spectrum on VOC profiling. The coverage of the VOC metabolome can be improved by combining complementary methods.
- Published
- 2020
37. Review of advanced sample preparation methods for the determination of alkylphenol ethoxylates and their degradation products in solid environmental matrices.
- Author
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Petrovic, M. and Barceló, D.
- Abstract
The widespread use and questionable environmental acceptability of non-ionic surfactants make the alkylphenol ethoxylates (APEOs) and their neutral and acidic degradation products a focus of interest in environmental analytical chemistry. An overview of sample preparation methods used for the determination of alkylphenolic compounds in solid environmental samples is presented. Specific issues related to sample preparation, such as sample collection, preservation, advanced extraction and clean up techniques, are discussed. Levels found in sediment, sewage sludge and biota are reviewed briefly. [ABSTRACT FROM AUTHOR]
- Published
- 2002
- Full Text
- View/download PDF
38. Mouse single oocyte imaging by MALDI-TOF MS for lipidomics
- Author
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Piotr Suder, Roberta Arena, Anna Bodzon-Kulakowska, Przemyslaw Mielczarek, Ewa Gibula-Tarlowska, Tomasz P. Wrobel, Kinga Hartman, Paulina Kozoł, Zbigniew Polanski, Łukasz Gąsior, and Grazyna Ptak
- Subjects
0301 basic medicine ,MALDI imaging ,Mink oocyte ,Clinical Biochemistry ,Biomedical Engineering ,Mouse oocyte ,single cell analysis ,Bioengineering ,Mass spectrometry imaging ,03 medical and health sciences ,0302 clinical medicine ,Single-cell analysis ,Lipidomics ,medicine ,Sample preparation ,030219 obstetrics & reproductive medicine ,Single cell analysis ,Chemistry ,MALDI-imaging ,sample preparation methods ,mouse oocyte ,Cell Biology ,Oocyte ,Ion source ,Matrix-assisted laser desorption/ionization ,mink oocyte ,030104 developmental biology ,medicine.anatomical_structure ,Biophysics ,Sample preparation methods ,Original Article ,Biotechnology - Abstract
Reproductive cells are a very special kind of material for the analysis. Depending on the species, their dimensions allow for the application of mass spectrometry imaging-based techniques to receive a reasonable data for interpretation of their condition without any additional sample preparation steps, except for typical sample preparation characteristic for IMS protocols. A comparison between lipid profiles of oocytes could answer the question of the overall quality of the cells in the function of time or conditions of storage. Even tiny differences in the lipid profiles, but still detectable by bioinformatic analysis, could be crucial for the estimation of the conditions of the cells in various stages of development or aging. In our study, MALDI-TOF/TOF MSI was used to analyze and visualize the single oocytes. We deposited the cells on the transparent indium-tin-oxide (ITO) glass and marked their positions, which allowed for the fast localization of the cells and precise laser targeting in the ion source. We also optimized the usage of different MALDI matrices and different approaches. The proposed way of measurement allows analyzing quite a significant quantity of oocytes in a reasonably short time. During the analysis, the lipid composition of the single cell was successfully estimated in a conventional usage of the MALDI ion source, and the localization of lipids was confirmed by imaging mass spectrometry (IMS) analysis. The observed quantity of the lipids allowed for the application of the LIFT™ technique to obtain MS/MS spectra sufficient for lipids’ unambiguous identification. We hope that our idea of the oocyte analysis will help to elucidate chemical changes that accompany different processes in which oocytes are involved. There could be such fascinating phenomena as the oocyte maturation, changes in the lipid components during their storage, and much more.
- Published
- 2019
39. Separation Sciences in Poland.
- Author
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Buszewski, Bogusław
- Subjects
INTERWAR Period (1918-1939) ,CHROMATOGRAPHIC analysis ,ATTITUDES of leaders ,CHEMOMETRICS - Abstract
This paper describes the most significant achievements related to the creation and development of separation methods. Tswiett Nerst's achievements and the role of such centers as Lublin, Warsaw, Gdańsk, Poznań, Łódź, Silesia, Kraków and Toruń are presented, as well as the role of leaders who created theories and methodological studies on chromatography and related techniques. The role of sample preparation methods is emphasized based on the same or similar theoretical foundations. The directions of developing these techniques in Poland today and in the future are presented. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
40. Pecularities of Candida yeast identification by mass spectrometric analysis (MALDI-ToF MS).
- Author
-
Anisimova AS, Poleeva MV, Aronova NV, Tsimbalistova MV, and Pavlovich NV
- Subjects
- Ethanol, Humans, Reproducibility of Results, Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization methods, Candida, Fungi
- Abstract
To carry the comparative analysis of sample preparation methods for the most effective identification of Candida yeast by mass spectrometric analysis. 265 strains of yeast and yeast-like fungi isolated from the sputum of patients with pneumonia were investigated. The selected strains were identified by conventional methods (cultural, morphological, tinctorial, enzymatic properties) and MALDI-ToF MS using the Autoflex speed III Bruker Daltonics mass spectrometer (Germany) and Flex Control software. To evaluate the effectiveness of fungi species determinination, the comparative analysis of sample preparation was performed using 4 methods: direct application to the target, an extended direct application method, protein extraction using ethanol/formic acid or trifluoroacetic acid. The accelerated scheme of identification of fungi by the culture method does not provide clear and unambiguous results. When using mass spectrometric analysis, the reliability of the results depended on the sample preparation. A comparative study of the effectiveness of fungi species determination by various methods of the sample preparation of 50 clinical isolates was carried out. It was revealed that the extraction of cells using TFC acid does not lead to the appearance of the recordable protein spectra. The use of direct and extended direct application methods made it possible to establish the species only in 32-44% of the strains. The most effective method of sample preparation was the method using formic acid and ethanol, which allowed us to determine the species affiliation in 100% of the studied fungi (Score 2.0). Depending on the yeast species, a high statistical indicator (Score≥2.3) was registered for 42-100% of samples. The results of present study show that the use of MALDI-ToF MS is the most reliable and informative method of Candida spp.identification., Competing Interests: The authors declare no conflict of interest.
- Published
- 2022
- Full Text
- View/download PDF
41. Fast and efficient analyses of the post-mortem human blood and bone marrow using DI-SPME/LC-TOFMS method for forensic medicine purposes.
- Author
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Majda, Alicja, Mrochem, Karolina, Wietecha-Posłuszny, Renata, Zapotoczny, Szczepan, and Zawadzki, Marcin
- Subjects
- *
BONE marrow , *AUTOPSY , *FORENSIC medicine , *SEROTONIN uptake inhibitors , *PSYCHIATRIC drugs , *MATRIX effect - Abstract
For the first time the method DI-SPME/LC-TOFMS was used and developed in order to determine the large antidepressant drugs in real forensic cases. The aim of the study was to optimize the new DI-SPME/LC-TOFMS method for the quantification of the large group of psychotropic drugs such as benzodiazepines, selective serotonin reuptake inhibitors, selective serotonin and noradrenaline reuptake inhibitors, tricyclic antidepressants and sleeping pills "Z". The volume of the sample, adsorption time, post-adsorption purification and desorption time were precisely optimized. The validation parameters such as limit of detection and quantification, linearity, precision during and between days and the matrix effect were determined. All obtained values are within the acceptable range for toxicological analyses. The usefulness of the method was confirmed by analyzing the post-mortem samples. Drug concentrations were determined in real samples with high precision, which gives perspectives for the DI-SPME/LC-TOFMS routine application in toxicological and forensic analyses in the future. Image 1 • Blood and Bone marrow aspirate (BMA) as a usefully material in forensic analysis. • Psychotropic drugs determined in blood and bone marrow aspirate. • DI-SPME as a good solution in analytical and forensic analysis. • Postmortem analysis by using new DI-SPME/LC-TOFMS method. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
42. Evaluation and Refinement of Sample Preparation Methods for Extracellular Matrix Proteome Coverage.
- Author
-
McCabe MC, Schmitt LR, Hill RC, Dzieciatkowska M, Maslanka M, Daamen WF, van Kuppevelt TH, Hof DJ, and Hansen KC
- Subjects
- Animals, Extracellular Matrix metabolism, Male, Mice, Inbred C57BL, Proteome, Mice, Extracellular Matrix Proteins metabolism, Proteomics methods
- Abstract
The extracellular matrix is a key component of tissues, yet it is underrepresented in proteomic datasets. Identification and evaluation of proteins in the extracellular matrix (ECM) has proved challenging due to the insolubility of many ECM proteins in traditional protein extraction buffers. Here we separate the decellularization and ECM extraction steps of several prominent methods for evaluation under real-world conditions. The results are used to optimize a two-fraction ECM extraction method. Approximately one dozen additional parameters are tested, and recommendations for analysis based on overall ECM coverage or specific ECM classes are given. Compared with a standard in-solution digest, the optimized method yielded a fourfold improvement in unique ECM peptide identifications., Competing Interests: Conflict of interest The authors declare no competing interests., (Copyright © 2021. Published by Elsevier Inc.)
- Published
- 2021
- Full Text
- View/download PDF
43. COMPARISON OF DRY ASHING, WET ASHING AND MICROWAVE DIGESTION FOR DETERMINATION OF TRACE ELEMENTS IN PERIOSTRACUM SERPENTIS AND PERIOSTRACUM CICADAE BY ICP-AES
- Author
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YANG,LI, LI,YANLAN, XJ,GUOXJ, MA,XIAOQIN, and YAN,QINGHUA
- Subjects
Periostracum cicadae ,Sample preparation methods ,ICP-AEStrace elements ,Periostracum serpentis - Abstract
The work was to demonstrate a repaid, precise and accurate determination method for ten trace elements (Al, Cd, Cr, Cu, Fe, Mg, Mn, Ni, Se and Zn) in periostracum serpentis (PS) and periostracum cicadae (PC) by inductively coupled plasma atomic emission spectrometry (ICP-AES). In order to evaluate the best digestion method, three different sample digestion methods including dry ashing, wet ashing and microwave digestion procedures were compared in this study. Method validation was carried out through the generation of calibration curves with multi-element standard solutions and a standard addition method by using standard reference material (GBW 07604-Poplar leaves). The results revealed the microwave digestion procedures were the best sample digestion method because of dry ashing and wet ashing procedures without any advantages in terms of digestion efficiency than the microwave digestion procedures. Trace element contents in PS and PC samples presented a wide variability from the test results, and ten trace element contents in PC were found to be higher than in PS. Determination of trace elements by ICP-AES after microwave digestion was more sensitive and precise, which can be used for quality control and analysis of pharmacological effect in various ecdyses of some animal samples.
- Published
- 2013
44. Novel nanosample preparation with a helium ion microscope
- Author
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Emile van Veldhoven, Diederik Maas, Henny W. Zandbergen, Maria Rudneva, and Sairam K. Malladi
- Subjects
Diffraction ,Silicon ,Materials science ,NI - Nano Instrumentation ,Analytical chemistry ,chemistry.chemical_element ,Different shapes ,High-resolution imaging ,High Tech Systems & Materials ,02 engineering and technology ,01 natural sciences ,chemistry.chemical_compound ,Physics & Electronics ,0103 physical sciences ,General Materials Science ,Sample preparation ,In-situ heating ,Helium ,Helium ion microscope (HIM) ,Room temperature ,010302 applied physics ,Ion microscopes ,TS - Technical Sciences ,Industrial Innovation ,Mechanical Engineering ,Helium ion microscopes ,021001 nanoscience & nanotechnology ,Condensed Matter Physics ,chemistry ,Strontium titanates ,Mechanics of Materials ,Transmission electron microscopy ,Image reconstruction ,Strontium titanate ,Sample preparation methods ,Electronics ,0210 nano-technology ,Platinum ,Field ion microscope ,Heating stage - Abstract
In this article, we present novel sample preparation methods using a helium ion microscope (HIM). We report the possibility of reshaping, at room temperature, thin metal lines on an electron-transparent membrane: A set of platinum bridges with standard geometry (300 × 200 × 15 nm) was modified at room temperature into different shapes using focused helium (He)-ion beam. Also the applicability of the HIM as a tool for precise modification of silicon (Si) and strontium titanate (SrTiO3) lamellae is shown and discussed. We demonstrated that in situ heating (e.g., at 600 °C) of the samples during He-beam illumination by use of a specially developed heating stage enables production of thin Si and SrTiO3 samples without significant artifacts. The quality of such cuts was inspected by transmission electron microscopy with high-resolution imaging, and the diffraction patterns were analyzed. Copyright © Materials Research Society 2013.
- Published
- 2013
- Full Text
- View/download PDF
45. Novel nanosample preparation with a helium ion microscope
- Subjects
Ion microscopes ,Silicon ,TS - Technical Sciences ,Industrial Innovation ,NI - Nano Instrumentation ,Different shapes ,Helium ion microscopes ,High-resolution imaging ,High Tech Systems & Materials ,Strontium titanates ,Physics & Electronics ,Image reconstruction ,Sample preparation methods ,Electronics ,In-situ heating ,Helium ion microscope (HIM) ,Transmission electron microscopy ,Heating stage ,Room temperature - Abstract
In this article, we present novel sample preparation methods using a helium ion microscope (HIM). We report the possibility of reshaping, at room temperature, thin metal lines on an electron-transparent membrane: A set of platinum bridges with standard geometry (300 × 200 × 15 nm) was modified at room temperature into different shapes using focused helium (He)-ion beam. Also the applicability of the HIM as a tool for precise modification of silicon (Si) and strontium titanate (SrTiO3) lamellae is shown and discussed. We demonstrated that in situ heating (e.g., at 600 °C) of the samples during He-beam illumination by use of a specially developed heating stage enables production of thin Si and SrTiO3 samples without significant artifacts. The quality of such cuts was inspected by transmission electron microscopy with high-resolution imaging, and the diffraction patterns were analyzed. Copyright © Materials Research Society 2013.
- Published
- 2013
46. Extraction approaches used for the determination of biologically active compounds (cyclitols, polyphenols and saponins) isolated from plant material.
- Author
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Ligor M, Ratiu IA, Kiełbasa A, Al-Suod H, and Buszewski B
- Abstract
Based on the bioactive properties of certain compounds, such as antioxidant and anti-inflammatory activities, an interesting subject of research are natural substances present in various parts of plants. The choice of the most appropriate method for separation and quantification of biologically active compounds from plants and natural products is a crucial step of any analytical procedure. The aim of this review article is to present an overview of a comprehensive literature study from the last 10 years (2007-2017), where relevant articles exposed the latest trends and the most appropriate methods applicable for separation and quantification of biologically active compounds from plant material and natural products. Consequently, various extraction methods have been discussed, together with the available procedures for purification and pre-concentration and dedicated methods used for analysis., (© 2018 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.)
- Published
- 2018
- Full Text
- View/download PDF
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