30 results on '"rapid diagnostic tests (RDTs)"'
Search Results
2. Plasmodium falciparum with pfhrp2 and pfhrp3 gene deletions in asymptomatic malaria infections in the Lake Victoria region, Kenya.
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Okai, Takatsugu, Chan, Chim W., KC, Achyut, Omondi, Protus, Musyoka, Kelvin, Kongere, James, Kagaya, Wataru, Okomo, Gordon, Kanoi, Bernard N., Kido, Yasutoshi, Gitaka, Jesse, and Kaneko, Akira
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RAPID diagnostic tests , *MEDICAL sciences , *MEDICAL microbiology , *LOGISTIC regression analysis , *MIXED infections - Abstract
Malaria rapid diagnostic tests (RDTs) targeting the Plasmodium falciparum histidine-rich protein 2 (PfHRP2) are widely used to diagnose P. falciparum infection. However, reports of P. falciparum strains lacking PfHRP2 and the structurally similar PfHRP3 have raised concerns about the utility and reliability of PfHRP2-based RDTs. This study investigated the presence of P. falciparum with pfhrp2 and/or pfhrp3 gene deletions among infected residents in the Lake Victoria region, Kenya. Four cross-sectional malaria, surveys were conducted in four sites (Suba South, Mfangano, Kibuogi, and Ngodhe) from September 2018 to January 2020. P. falciparum infections were detected using a PfHRP2-based RDT, microscopy, and PCR on 9120 finger-prick blood samples. Samples negative by RDT but positive by PCR were selected for PCR amplification of pfmsp1 and pfmsp2 to confirm the quality and quantity of P. falciparum DNA. Samples positive for both pfmsp1 and pfmsp2 were included for detection of deletions of exons 1 and 2 in pfhrp2 and pfhrp3 PCR. The multiplicity of infection (MOI) was determined as the higher allele count between pfmsp1 and pfmsp2. Logistic regression analysis was performed to analyze the association between pfhrp2 and/or pfhrp3 deletions and demographic and infection variables. Of the 445 RDT-negative and PCR-positive samples, 125 (28.1%) were analyzed for pfhrp2 and pfhrp3 deletions. Single pfhrp2 deletion, single pfhrp3 deletion, and pfhrp2/3 double deletions were detected in 13 (10.4%), 19 (15.2%), and 36 (28.8%) samples, respectively. Single pfhrp2 deletion was found in all sites while single pfhrp3 deletion was found in all sites except Kibuogi. The majority of samples with pfhrp2 and/or pfhrp3 deletions were submicroscopic (73.5%), asymptomatic (80.9%), and monoclonal (80.9%). Polyclonal infection was significantly (p = 0.022) associated with a lower odds of pfhrp2/3 double deletion, suggesting detection of intact pfhrp2/3 in mixed infections. We report the presence of P. falciparum with pfhrp2/pfhrp3 double deletions among asymptomatic and submicroscopic infections in Kenya. Our findings highlight the need for active monitoring of pfhrp2 and pfhrp3 deletions at the community level to improve malaria detection and control in the region. [ABSTRACT FROM AUTHOR]
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- 2024
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3. Comparison of fine-scale malaria strata derived from population survey data collected using RDTs, microscopy and qPCR in South-Eastern Tanzania
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Issa H. Mshani, Frank M. Jackson, Elihaika G. Minja, Said Abbasi, Nasoro S. Lilolime, Faraja E. Makala, Alfred B. Lazaro, Idrisa S. Mchola, Linda N. Mukabana, Najat F. Kahamba, Alex J. Limwagu, Rukia M. Njalambaha, Halfan S. Ngowo, Donal Bisanzio, Francesco Baldini, Simon A. Babayan, and Fredros Okumu
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Malaria ,Fine scale stratifications ,Prevalence rate ,Rapid diagnostic tests (RDTs) ,Polymerase chain reaction (PCR) ,Microscopy ,Arctic medicine. Tropical medicine ,RC955-962 ,Infectious and parasitic diseases ,RC109-216 - Abstract
Abstract Background Malaria-endemic countries are increasingly adopting data-driven risk stratification, often at district or higher regional levels, to guide their intervention strategies. The data typically comes from population-level surveys collected by rapid diagnostic tests (RDTs), which unfortunately perform poorly in low transmission settings. Here, a high-resolution survey of Plasmodium falciparum prevalence rate (PfPR) was conducted in two Tanzanian districts using rapid diagnostic tests (RDTs), microscopy, and quantitative polymerase chain reaction (qPCR) assays, enabling the comparison of fine-scale strata derived from these different diagnostic methods. Methods A cross-sectional survey was conducted in 35 villages in Ulanga and Kilombero districts, south-eastern Tanzania between 2022 and 2023. A total of 7,628 individuals were screened using RDTs (SD-BIOLINE) and microscopy, with two thirds of the samples further analysed by qPCR. The data was used to categorize each district and village as having very low (PfPR 50%. Prevalence varied by testing method: Kilombero was low risk by RDTs (PfPR = 3%) and microscopy (PfPR = 2%) but moderate by qPCR (PfPR = 9%); Ulanga was high risk by RDTs (PfPR = 39%) and qPCR (PfPR = 54%) but moderate by microscopy (PfPR = 26%). RDTs and microscopy classified majority of the 35 villages as very low to low risk (18–21 villages). In contrast, qPCR classified most villages as moderate to high risk (29 villages). Using qPCR as the reference, PPV for RDTs and microscopy ranged from as low as 80% in moderate and high transmission villages. Sensitivity was 62% for RDTs and 41% for microscopy; specificity was 93% and 96%, respectively. Kappa values were 0.7 for RDTs and 0.5 for microscopy. School-age children (5–15 years) had higher malaria prevalence and parasite densities than adults (P
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- 2024
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4. Plasmodium falciparum with pfhrp2 and pfhrp3 gene deletions in asymptomatic malaria infections in the Lake Victoria region, Kenya
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Takatsugu Okai, Chim W. Chan, Achyut KC, Protus Omondi, Kelvin Musyoka, James Kongere, Wataru Kagaya, Gordon Okomo, Bernard N. Kanoi, Yasutoshi Kido, Jesse Gitaka, and Akira Kaneko
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Malaria ,Plasmodium falciparum ,Rapid diagnostic tests (RDTs) ,pfhrp2 ,pfhrp3 ,Gene deletions ,Arctic medicine. Tropical medicine ,RC955-962 - Abstract
Abstract Malaria rapid diagnostic tests (RDTs) targeting the Plasmodium falciparum histidine-rich protein 2 (PfHRP2) are widely used to diagnose P. falciparum infection. However, reports of P. falciparum strains lacking PfHRP2 and the structurally similar PfHRP3 have raised concerns about the utility and reliability of PfHRP2-based RDTs. This study investigated the presence of P. falciparum with pfhrp2 and/or pfhrp3 gene deletions among infected residents in the Lake Victoria region, Kenya. Four cross-sectional malaria, surveys were conducted in four sites (Suba South, Mfangano, Kibuogi, and Ngodhe) from September 2018 to January 2020. P. falciparum infections were detected using a PfHRP2-based RDT, microscopy, and PCR on 9120 finger-prick blood samples. Samples negative by RDT but positive by PCR were selected for PCR amplification of pfmsp1 and pfmsp2 to confirm the quality and quantity of P. falciparum DNA. Samples positive for both pfmsp1 and pfmsp2 were included for detection of deletions of exons 1 and 2 in pfhrp2 and pfhrp3 PCR. The multiplicity of infection (MOI) was determined as the higher allele count between pfmsp1 and pfmsp2. Logistic regression analysis was performed to analyze the association between pfhrp2 and/or pfhrp3 deletions and demographic and infection variables. Of the 445 RDT-negative and PCR-positive samples, 125 (28.1%) were analyzed for pfhrp2 and pfhrp3 deletions. Single pfhrp2 deletion, single pfhrp3 deletion, and pfhrp2/3 double deletions were detected in 13 (10.4%), 19 (15.2%), and 36 (28.8%) samples, respectively. Single pfhrp2 deletion was found in all sites while single pfhrp3 deletion was found in all sites except Kibuogi. The majority of samples with pfhrp2 and/or pfhrp3 deletions were submicroscopic (73.5%), asymptomatic (80.9%), and monoclonal (80.9%). Polyclonal infection was significantly (p = 0.022) associated with a lower odds of pfhrp2/3 double deletion, suggesting detection of intact pfhrp2/3 in mixed infections. We report the presence of P. falciparum with pfhrp2/pfhrp3 double deletions among asymptomatic and submicroscopic infections in Kenya. Our findings highlight the need for active monitoring of pfhrp2 and pfhrp3 deletions at the community level to improve malaria detection and control in the region.
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- 2024
- Full Text
- View/download PDF
5. Comparison of fine-scale malaria strata derived from population survey data collected using RDTs, microscopy and qPCR in South-Eastern Tanzania
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Mshani, Issa H., Jackson, Frank M., Minja, Elihaika G., Abbasi, Said, Lilolime, Nasoro S., Makala, Faraja E., Lazaro, Alfred B., Mchola, Idrisa S., Mukabana, Linda N., Kahamba, Najat F., Limwagu, Alex J., Njalambaha, Rukia M., Ngowo, Halfan S., Bisanzio, Donal, Baldini, Francesco, Babayan, Simon A., and Okumu, Fredros
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- 2024
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6. Poor performance of malaria rapid diagnostic tests for the detection of Plasmodium malariae among returned international travellers in China
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Jingyao Wu, Jianxia Tang, Weiming Wang, Gangcheng Chen, Xiaoqin He, Sui Xu, Yuanyuan Cao, Yaping Gu, Guoding Zhu, and Jun Cao
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Malaria ,Plasmodium malariae ,Rapid diagnostic tests (RDTs) ,Prevention of re-establishment ,Arctic medicine. Tropical medicine ,RC955-962 ,Infectious and parasitic diseases ,RC109-216 - Abstract
Abstract Background Malaria is a worldwide infectious disease. For countries that have achieved malaria elimination, the prevention of re-establishment due to infections in returned travellers has become important. The accurate and timely diagnosis of malaria is the key in preventing re-establishment, and malaria rapid diagnostic tests (RDTs) are frequently used due to their convenience. However, the RDT performance in Plasmodium malariae (P. malariae) infection diagnosis remains unknown. Methods This study analysed epidemiological features and diagnosis patterns of imported P. malariae cases from 2013 to 2020 in Jiangsu Province and evaluated the sensitivity of four parasite enzyme lactate dehydrogenase (pLDH)-targeting RDTs (Wondfo, SD BIONLINE, CareStart and BioPerfectus) and one aldolase-targeting RDT(BinaxNOW) for P. malariae detection. Furthermore, influential factors were investigated, including parasitaemia load, pLDH concentration and target gene polymorphisms. Results The median duration from symptom onset to diagnosis among patients with P. malariae infection was 3 days, which was longer than that with Plasmodium falciparum (P. falciparum) infection. The RDTs had a low detection rate (39/69, 56.5%) among P. malariae cases. All tested RDT brands had poor performance in P. malariae detection. All the brands except the worst-performing SD BIOLINE, achieved 75% sensitivity only when the parasite density was higher than 5000 parasites/μL. Both pLDH and aldolase showed relatively conserved and low gene polymorphism rates. Conclusions The diagnosis of imported P. malariae cases was delayed. The RDTs had poor performance in P. malariae diagnosis and may threaten the prevention of malaria re-establishment from returned travellers. The improved RDTs or nucleic acid tests for P. malariae cases are urgently needed for the detection of imported cases in the future.
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- 2023
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7. Poor performance of malaria rapid diagnostic tests for the detection of Plasmodium malariae among returned international travellers in China.
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Wu, Jingyao, Tang, Jianxia, Wang, Weiming, Chen, Gangcheng, He, Xiaoqin, Xu, Sui, Cao, Yuanyuan, Gu, Yaping, Zhu, Guoding, and Cao, Jun
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RAPID diagnostic tests , *MALARIA , *PLASMODIUM , *MALARIA prevention , *LACTATE dehydrogenase - Abstract
Background: Malaria is a worldwide infectious disease. For countries that have achieved malaria elimination, the prevention of re-establishment due to infections in returned travellers has become important. The accurate and timely diagnosis of malaria is the key in preventing re-establishment, and malaria rapid diagnostic tests (RDTs) are frequently used due to their convenience. However, the RDT performance in Plasmodium malariae (P. malariae) infection diagnosis remains unknown. Methods: This study analysed epidemiological features and diagnosis patterns of imported P. malariae cases from 2013 to 2020 in Jiangsu Province and evaluated the sensitivity of four parasite enzyme lactate dehydrogenase (pLDH)-targeting RDTs (Wondfo, SD BIONLINE, CareStart and BioPerfectus) and one aldolase-targeting RDT(BinaxNOW) for P. malariae detection. Furthermore, influential factors were investigated, including parasitaemia load, pLDH concentration and target gene polymorphisms. Results: The median duration from symptom onset to diagnosis among patients with P. malariae infection was 3 days, which was longer than that with Plasmodium falciparum (P. falciparum) infection. The RDTs had a low detection rate (39/69, 56.5%) among P. malariae cases. All tested RDT brands had poor performance in P. malariae detection. All the brands except the worst-performing SD BIOLINE, achieved 75% sensitivity only when the parasite density was higher than 5000 parasites/μL. Both pLDH and aldolase showed relatively conserved and low gene polymorphism rates. Conclusions: The diagnosis of imported P. malariae cases was delayed. The RDTs had poor performance in P. malariae diagnosis and may threaten the prevention of malaria re-establishment from returned travellers. The improved RDTs or nucleic acid tests for P. malariae cases are urgently needed for the detection of imported cases in the future. [ABSTRACT FROM AUTHOR]
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- 2023
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8. Fitness Costs of pfhrp2 and pfhrp3 Deletions Underlying Diagnostic Evasion in Malaria Parasites.
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Nair, Shalini, Li, Xue, Nkhoma, Standwell C, and Anderson, Tim
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Background: Rapid diagnostic tests based on detection of histidine-rich proteins (HRPs) are widely used for malaria diagnosis, but parasites carrying pfhrp deletions can evade detection and are increasing in frequency in some countries. Models aim to predict conditions under which pfhrp2 and/or pfhrp3 deletions will increase, but a key parameter-the fitness cost of deletions-is unknown.Methods: We removed pfhrp2 and/or pfhrp3 from a Malawian parasite clone using gene editing approaches) and measured fitness costs by conducting pairwise competition experiments.Results: We observed significant fitness costs of 0.087 ± 0.008 (1 standard error) per asexual cycle for pfhrp2 deletion and 0.113 ± 0.008 for the pfhrp2/3 double deletion, relative to the unedited progenitor parasite. Selection against deletions is strong and comparable to that resulting from drug resistance mutations.Conclusions: Prior modeling suggested that diagnostic selection may drive increased frequency of pfhrp deletions only when fitness costs are mild. Our experiments show that costs of pfhrp deletions are higher than these thresholds, but modeling and empirical results can be reconciled if the duration of infection is short. These results may inform future modeling to understand why pfhrp2/3 deletions are increasing in some locations (Ethiopia and Eritrea) but not in others (Mekong region). [ABSTRACT FROM AUTHOR]- Published
- 2022
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9. Malaria diagnosis and mapping with m-Health and geographic information systems (GIS): evidence from Uganda
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Alberto Larocca, Roberto Moro Visconti, and Michele Marconi
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Remote diagnosis ,Malaria mapping ,Mobile phones ,Rapid diagnostic tests (RDTs) ,Process innovation ,Healthcare ,Arctic medicine. Tropical medicine ,RC955-962 ,Infectious and parasitic diseases ,RC109-216 - Abstract
Abstract Background Rural populations experience several barriers to accessing clinical facilities for malaria diagnosis. Increasing penetration of ICT and mobile-phones and subsequent m-Health applications can contribute overcoming such obstacles. Methods GIS is used to evaluate the feasibility of m-Health technologies as part of anti-malaria strategies. This study investigates where in Uganda: (1) malaria affects the largest number of people; (2) the application of m-Health protocol based on the mobile network has the highest potential impact. Results About 75% of the population affected by Plasmodium falciparum malaria have scarce access to healthcare facilities. The introduction of m-Health technologies should be based on the 2G protocol, as 3G mobile network coverage is still limited. The western border and the central-Southeast are the regions where m-Health could reach the largest percentage of the remote population. Six districts (Arua, Apac, Lira, Kamuli, Iganga, and Mubende) could have the largest benefit because they account for about 28% of the remote population affected by falciparum malaria with access to the 2G mobile network. Conclusions The application of m-Health technologies could improve access to medical services for distant populations. Affordable remote malaria diagnosis could help to decongest health facilities, reducing costs and contagion. The combination of m-Health and GIS could provide real-time and geo-localized data transmission, improving anti-malarial strategies in Uganda. Scalability to other countries and diseases looks promising.
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- 2016
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10. Impact of COVID-19 on routine malaria indicators in rural Uganda: an interrupted time series analysis
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Jane F. Namuganga, Jessica Briggs, Michelle E. Roh, Jaffer Okiring, Yasin Kisambira, Asadu Sserwanga, James A. Kapisi, Emmanuel Arinaitwe, Chris Ebong, Isaac Ssewanyana, Catherine Maiteki-Ssebuguzi, Moses R. Kamya, Sarah G. Staedke, Grant Dorsey, and Joaniter I. Nankabirwa
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Infection Control ,Pre-COVID ,RC955-962 ,COVID-19 ,COVID-19 pandemic ,Interrupted Time Series Analysis ,rapid diagnostic tests (RDTs) ,Infectious and parasitic diseases ,RC109-216 ,Rural Health ,Article ,Malaria ,Chronic Disease Indicators ,Infectious Diseases ,Arctic medicine. Tropical medicine ,ITSA ,parasitic diseases ,Ambulatory Care ,Humans ,Uganda ,Parasitology - Abstract
Background In March 2020, the government of Uganda implemented a strict lockdown policy in response to the COVID-19 pandemic. Interrupted time series analysis (ITSA) was performed to assess whether major changes in outpatient attendance, malaria burden, and case management occurred after the onset of the COVID-19 epidemic in rural Uganda. Methods Individual level data from all outpatient visits collected from April 2017 to March 2021 at 17 facilities were analysed. Outcomes included total outpatient visits, malaria cases, non-malarial visits, proportion of patients with suspected malaria, proportion of patients tested using rapid diagnostic tests (RDTs), and proportion of malaria cases prescribed artemether-lumefantrine (AL). Poisson regression with generalized estimating equations and fractional regression was used to model count and proportion outcomes, respectively. Pre-COVID trends (April 2017-March 2020) were used to predict the’expected’ trend in the absence of COVID-19 introduction. Effects of COVID-19 were estimated over two six-month COVID-19 time periods (April 2020-September 2020 and October 2020–March 2021) by dividing observed values by expected values, and expressed as ratios. Results A total of 1,442,737 outpatient visits were recorded. Malaria was suspected in 55.3% of visits and 98.8% of these had a malaria diagnostic test performed. ITSA showed no differences between observed and expected total outpatient visits, malaria cases, non-malarial visits, or proportion of visits with suspected malaria after COVID-19 onset. However, in the second six months of the COVID-19 time period, there was a smaller mean proportion of patients tested with RDTs compared to expected (relative prevalence ratio (RPR) = 0.87, CI (0.78–0.97)) and a smaller mean proportion of malaria cases prescribed AL (RPR = 0.94, CI (0.90–0.99)). Conclusions In the first year after the COVID-19 pandemic arrived in Uganda, there were no major effects on malaria disease burden and indicators of case management at these 17 rural health facilities, except for a modest decrease in the proportion of RDTs used for malaria diagnosis and the mean proportion of malaria cases prescribed AL in the second half of the COVID-19 pandemic year. Continued surveillance will be essential to monitor for changes in trends in malaria indicators so that Uganda can quickly and flexibly respond to challenges imposed by COVID-19.
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- 2021
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11. Malaria diagnosis and mapping with m-Health and geographic information systems (GIS): evidence from Uganda.
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Larocca, Alberto, Visconti, Roberto Moro, and Marconi, Michele
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MALARIA diagnosis , *DISEASE mapping , *MOBILE health , *GEOGRAPHIC information systems , *PUBLIC health , *DATA transmission systems - Abstract
Background: Rural populations experience several barriers to accessing clinical facilities for malaria diagnosis. Increasing penetration of ICT and mobile-phones and subsequent m-Health applications can contribute overcoming such obstacles. Methods: GIS is used to evaluate the feasibility of m-Health technologies as part of anti-malaria strategies. This study investigates where in Uganda: (1) malaria affects the largest number of people; (2) the application of m-Health protocol based on the mobile network has the highest potential impact. Results: About 75% of the population affected by Plasmodium falciparum malaria have scarce access to healthcare facilities. The introduction of m-Health technologies should be based on the 2G protocol, as 3G mobile network coverage is still limited. The western border and the central-Southeast are the regions where m-Health could reach the largest percentage of the remote population. Six districts (Arua, Apac, Lira, Kamuli, Iganga, and Mubende) could have the largest benefit because they account for about 28% of the remote population affected by falciparum malaria with access to the 2G mobile network. Conclusions: The application of m-Health technologies could improve access to medical services for distant populations. Affordable remote malaria diagnosis could help to decongest health facilities, reducing costs and contagion. The combination of m-Health and GIS could provide real-time and geo-localized data transmission, improving antimalarial strategies in Uganda. Scalability to other countries and diseases looks promising. [ABSTRACT FROM AUTHOR]
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- 2016
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12. Towards subsidized malaria rapid diagnostic tests. Lessons learned from programmes to subsidise artemisinin-based combination therapies in the private sector: a review.
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Lussiana, Cristina
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MALARIA diagnosis ,ARTEMISININ ,MALARIA treatment ,MEDICAL care ,PUBLIC health ,THERAPEUTICS - Abstract
Copyright of Health Policy & Planning is the property of Oxford University Press / USA and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
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- 2016
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13. Challenges with implementing malaria rapid diagnostic tests at primary care facilities in a Ghanaian district: a qualitative study.
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Boadu, Nana Yaa, Amuasi, John, Ansong, Daniel, Einsiedel, Edna, Menon, Devidas, and Yanow, Stephanie K.
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MALARIA diagnosis , *ROUTINE diagnostic tests , *PRIMARY care , *MEDICAL quality control , *ATTITUDES of medical personnel - Abstract
Background: Rapid diagnostic Tests (RDTs) for malaria enable diagnostic testing at primary care facilities in resource-limited settings, where weak infrastructure limits the use of microscopy. In 2010, Ghana adopted a test-before-treat guideline for malaria, with RDT use promoted to facilitate diagnosis. Yet healthcare practitioners still treat febrile patients without testing, or despite negative malaria test results. Few studies have explored RDT implementation beyond the notions of provider or patient acceptability. The aim of this study was to identify the factors directly influencing malaria RDT implementation at primary care facilities in a Ghanaian district. Methods: Qualitative interviews, focus groups and direct observations were conducted with 50 providers at six purposively selected primary care facilities in the Atwima–Nwabiagya district. Data were analysed thematically. Results: RDT implementation was hampered by: (1) healthcare delivery constraints (weak supply chain, limited quality assurance and control, inadequate guideline emphasis, staffing limitations); (2) provider perceptions (entrenched case-management paradigms, limited preparedness for change); (3) social dynamics of care delivery (expected norms of provider-patient interaction, test affordability); and (4) limited provider engagement in policy processes leading to fragmented implementation of health sector reform. Conclusion: Limited health system capacity, socio-economic, political, and historical factors hampered malaria RDT implementation at primary care facilities in the study district. For effective RDT implementation providers must be: (1) adequately enabled through efficient allocation and management of essential healthcare commodities; (2) appropriately empowered with the requisite knowledge and skill through ongoing, effective professional development; and (3) actively engaged in policy dialogue to demystify socio-political misconceptions that hinder health sector reform policies from improving care delivery. Clear, consistent guideline emphasis, with complementary action to address deep-rooted provider concerns will build their confidence in, and promote uptake of recommended policies, practices, and technology for diagnosing malaria. [ABSTRACT FROM AUTHOR]
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- 2016
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14. КОРОНАВІРУСНА ХВОРОБА(COVID-19). ВИКЛИКИ ТА ПЕРСПЕКТИВИ СПЕЦИФІЧНОЇ ДІАГНОСТИКИ
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иммуноферментный анализ (ИФА) ,полімеразна ланцюгова реакція зі зворотною транскрипцією в реальному часі (рЗТ-ПЛР) ,быстрые диагностические тесты ,SARS-CoV-2 virus ,rapid diagnostic tests (RDTs) ,специфічна діагностика ,імуноферментний аналіз (ІФА) ,полимеразная цепная реакция с обратной транскрипцией в реальном времени (рОТ-ПЦР) ,вірус SARS-CoV-2 ,specific diagnostics ,вирус SARS-CoV-2 ,enzyme-linked immunosorbent assay (ELISA) ,reverse transcription and real-time polymerase chain reaction (rRT-PCR) ,специфическая диагностика ,швидкі діагностичні тести - Abstract
The coronavirus disease (COVID-19) pandemic, which started in the late 2019 in China, has become an unforeseen challenge to the health care system of all the countries in the world. Establishment of a mass specific diagnostics of emergent infection caused by the coronavirus SARS-CoV-2 was one of the problems that needed immediate solution. This review presents the technologies used for the specific diagnostics of COVID-19. The advantages and limitations of the most common methodologies for detection of the pathogen or virus-specific antibodies are discussed. Detection of the virus genome fragments by reverse transcription and real-time polymerase chain reaction (rRT-PCR) allowed to achieve high accuracy of diagnosis. From the beginning of the pandemic, this method has been considered as the "gold" standard, despite the limitations associated with its high cost, complexity and the need for testing in specialized laboratories. Cheaper immunological methods have insufficient diagnostic efficiency and can be used only as complements to molecular testing. The review also presents promising methods of specific diagnostics of COVID-19 which are based on molecular genetic technologies, characterized by simplicity and rapidity, do not require expensive equipment and can be performed in points of care., Пандемия коронавирусной болезни (COVID-19), которая стартовала в конце 2019 года в Китае, стала непредсказуемым вызовом для системы здравоохранения абсолютно всех стран мира. Среди проблем, которые требовали немедленного решения, стало налаживание массовой специфической диа гностики эмерджентной инфекции, вызванной коронавирусом SARS-CoV-2. В данном обзоре представлены технологии, применяемые для специфической диагностики COVID-19. Обсуждаются преимущества и ограничения наиболее распространенных методологий, направленных на выявление возбудителя или специфических к нему антител. Выявление фрагментов генома вируса с помощью полимеразной цепной реакции с обратной транскрипцией в реальном времени (рОТ-ПЦР) позволило достичь высокой точности диагностики. С самого начала пандемии и до сих пор этот метод считается «золотым» стандартом, несмотря на ограничения, связанные с его высокой стоимостью, трудоемкостью и необходимостью проведения исследований в специализированных лабораториях. Более дешевые иммунологические методы имеют недостаточную диагностическую эффективность и могут использоваться только как дополнение к молекулярному тестированию. В обзоре также представлены перспективные методы специфической диагностики COVID-19, которые основаны на молекулярно-генетических технологиях, характеризуются простотой и быстротой выполнения, не требуют дорогостоящего оборудования и могут выполняться в пунктах оказания медицинской помощи., Пандемія коронавірусної хвороби (COVID-19), яка стартувала наприкінці 2019 року в Китаї, стала непередбаченим викликом для системи охорони здоров’я абсолютно усіх країн світу. Серед проблем, які потребували негайного вирішення, стало налагодження масової специфічної діагностики емерджентної інфекції, спричиненої коронавірусом SARS-CoV-2. У даному огляді представлені технології, які застосовуються для специфічної діагностики COVID-19. Обговорено переваги та обмеження найбільш поширених методологій, спрямованих на виявлення збудника або специфічних до нього антитіл. Виявлення фрагментів геному вірусу за допомогою полімеразної ланцюгової реакції зі зворотною транскрипцією в реальному часі (рЗТ-ПЛР) дозволило досягти високої точності діагностики. З самого початку пандемії та дотепер цей метод вважається «золотим» стандартом, незважаючи на обмеження, пов’язані з його високою вартістю, трудомісткістю та необхідністю проведення досліджень в спеціалізованих лабораторіях. Більш дешеві імунологічні методи мають недостатню діагностичну ефективність і можуть використовуватися лише як додаткові до молекулярного тестування. В огляді також представлені перспективні методи специфічної діагностики COVID-19, які засновані на молекулярно-генетичних технологіях, характеризуються простотою та швидкістю виконання, не потребують дорогого обладнання і можуть виконуватись в пунктах надання медичної допомоги.
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- 2021
15. Evaluation of histidine-rich proteins 2 and 3 gene deletions in Plasmodium falciparum in endemic areas of the Brazilian Amazon
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José Mário Velosos Peres, Leandro Góes, Ana Ruth Lima Arcanjo, Giselle Mr Viana, Suiane Costa Negreiros do Valle, Marcus V. G. Lacerda, Liana Blume, Nathália Nogueira Chamma-Siqueira, José Maria Nascimento, and Marinete Póvoa
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Cruzeiro do Sul (Acre) ,Health, Toxicology and Mutagenesis ,Protozoan Proteins ,lcsh:Medicine ,pfhrp3 ,rapid diagnostic tests (RDTs) ,pfhrp2 ,chemistry.chemical_compound ,Exon ,0302 clinical medicine ,Parasite hosting ,Malaria, Falciparum ,Testes Imediatos ,Dele??o de Genes ,0303 health sciences ,education.field_of_study ,Amazon rainforest ,Sensibilidade e Especificidade ,Plasmodium falciparum ,Plasmodium falciparum / patogenicidade ,Manaus (AM) ,Brazil ,Histidina / an?lise ,030231 tropical medicine ,Population ,Antigens, Protozoan ,Mal?ria falciparum / diagn?stico ,Biology ,Article ,03 medical and health sciences ,parasitic diseases ,medicine ,Humans ,Rea??o em Cadeia da Polimerase / m?todos ,education ,Gene ,030304 developmental biology ,Plasmodium falciparum / gen?tica ,Diagnostic Tests, Routine ,gene deletion ,lcsh:R ,Public Health, Environmental and Occupational Health ,Proteins ,medicine.disease ,biology.organism_classification ,Virology ,chemistry ,DNA ,Malaria - Abstract
This study was supported by the National Council for Scientific and Technological Development?Brazil (CNPq)?Grant 302292/2017-9 as well as by the Evandro Chagas Institute?s own budget resource Minist?rio da Sa?de. Secretaria de Vigil?ncia em Sa?de. Instituto Evandro Chagas. Programa de P?s-Gradua??o em epidemiologia e Vigil?ncia em Sa?de. Ananindeua, PA, Brasil. Minist?rio da Sa?de. Secretaria de Vigil?ncia em Sa?de. Instituto Evandro Chagas. Ananindeua, PA, Brasil. Minist?rio da Sa?de. Secretaria de Vigil?ncia em Sa?de. Instituto Evandro Chagas. Ananindeua, PA, Brasil. Minist?rio da Sa?de. Secretaria de Vigil?ncia em Sa?de. Instituto Evandro Chagas. Ananindeua, PA, Brasil. State Health Department of Acre. Hemon?cleo Cruzeiro do Sul. Cruzeiro do Sul, AC, Brazil. Central Public Health Laboratory of Amazonas. Manaus, AM, Brazil. Heitor Vieira Dourado Tropical Medicine Foundation. Manaus, AM, Brazil / Funda??o Oswaldo cruz. Le?nidas and Maria Deane Institute. Manaus, AM, Brazil. Ministry of Health. Health Surveillance Secretariat. Department of Immunization and Communicable Diseases. General Coordination for the Monitoring of Zoonoses and Malaria Vector Transmission Diseases. Malaria Technical Group. Bras?lia, DF, Brazil. Minist?rio da Sa?de. Secretaria de Vigil?ncia em Sa?de. Instituto Evandro Chagas. Ananindeua, PA, Brasil / National Council for Scientific and Technological Development. Bras?lia, DF, Brazil. Minist?rio da Sa?de. Secretaria de Vigil?ncia em Sa?de. Instituto Evandro Chagas. Ananindeua, PA, Brasil. Histidine-rich proteins 2 and 3 gene (pfhrp2 and pfhrp3) deletions affect the efficacy of rapid diagnostic tests (RDTs) based on the histidine-rich protein 2 (HRP2), compromising the correct identification of the Plasmodium falciparum species. Therefore, molecular surveillance is necessary for the investigation of the actual prevalence of this phenomenon and the extent of the disappearance of these genes in these areas and other South American countries, thus guiding national malaria control programs on the appropriate use of RDTs. This study aimed to evaluate the pfhrp2 and pfhrp3 gene deletion in P. falciparum in endemic areas of the Brazilian Amazon. Aliquots of DNA from the biorepository of the Laboratory of Basic Research in Malaria, Evandro Chagas Institute, with a positive diagnosis for P. falciparum infection as determined by microscopy and molecular assays, were included. Monoinfection was confirmed by nested-polymerase chain reaction assay, and DNA quality was assessed by amplification of the merozoite surface protein-2 gene (msp2). The pfhrp2 and pfhrp3 genes were amplified using primers for the region between exons 1 and 2 and for all extension of exon 2. Aliquots of DNA from 192 P. falciparum isolates were included in the study, with 68.7% (132/192) from the municipality of Cruzeiro do Sul (Acre) and 31.3% (60/192) from Manaus (Amazonas). Of this total, 82.8% (159/192) of the samples were considered of good quality. In the state of Acre, 71.7% (71/99) showed pfhrp2 gene deletion and 94.9% (94/99) showed pfhrp3 gene deletion, while in the state of Amazonas, 100.0% (60/60) of the samples showed pfhrp2 gene deletion and 98.3% (59/60) showed pfhrp3 gene deletion. Moreover, 79.8% (127/159) of isolates displayed gene deletion. Our findings confirm the presence of a parasite population with high frequencies of pfhrp2 and pfhrp3 gene deletions in the Brazilian Amazon region. This suggests reconsidering the use of HRP2-based RDTs in the Acre and Amazonas states and calls attention to the importance of molecular surveillance and mapping of pfhrp2/pfhrp3 deletions in this area and in other locations in the Amazon region to guarantee appropriate patient care, control and ultimately contribute to achieving P. falciparum malaria elimination
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- 2021
16. Rapid diagnostic tests for malaria and health workers' adherence to test results at health facilities in Zambia.
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Manyando, Christine, Njunju, Eric M., Chileshe, Justin, Siziya, Seter, and Shiff, Clive
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MALARIA prevention , *ROUTINE diagnostic tests , *ANTIMALARIALS , *MEDICAL personnel , *FEVER - Abstract
Background In Zambia, there has been a large scaling up of interventions to control malaria in recent years including the deployment of rapid diagnostic tests (RDTs) to improve malaria surveillance data as well as guide malaria treatment in health facilities. The practical challenge is the impact of RDT results on subsequent management of patients. This study explored the role of RDTs in malaria diagnosis and the health workers' adherence to test results. Methods An observational prospective study was carried out at health centres in four districts, namely Chibombo, Chingola, Chipata, and Choma. Children under the age of five years with history of fever were recruited and the clinicians' use of RDT results was observed to establish whether prescriptions were issued prior to the availability of parasitological results or after, and whether RDT results influenced their prescriptions. Results Of the 2, 393 recruited children, 2, 264 had both RDT and microscopic results. Two in three (68.6%) children were treated with anti-malarials despite negative RDT results and almost half (46.2%) of these were prescribed Coartem®. Only 465 (19.4%) of the 2,393 children were prescribed drugs before receiving laboratory results. A total of 76.5% children were prescribed drugs after laboratory results. Children with RDT positive results were 2.66 (95% CI (2.00, 3.55)) times more likely to be prescribed anti-malarial drugs. Children who presented with fever at admission (although history of fever or presence of fever at admission was an entry criterion) were 42% less likely to be prescribed an anti-malarial drug compared to children who had no fever (AOR = 0.58, 95% CI (0.52, 0.65)). It was noted that proportions of children who were RDT- and microscopy-positive significantly declined over the years from 2005 to 2008. Conclusions RDTs may contribute to treatment of febrile illness by confirming malaria cases from nonmalaria cases in children under the age of five. However, the adherence of the health workers to prescribing anti-malarials to only RDT-positive cases at health facility level will still require to be explored further as their role is crucial in more precise reporting of malaria cases in this era towards malaria elimination as the target. [ABSTRACT FROM AUTHOR]
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- 2014
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17. Performance of two rapid diagnostic tests for malaria diagnosis at the China-Myanmar border area.
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Juan Yan, Nana Li, Xu Wei, Peipei Li, Zhenjun Zhao, Lili Wang, Siying Li, Xiaomei Li, Ying Wang, Shuying Li, Zhaoqing Yang, Bin Zheng, Guofa Zhou, Guiyun Yan, Liwang Cui, Yaming Cao, and Qi Fan
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DIAGNOSTIC examinations , *MALARIA diagnosis , *MALARIA prevention , *HUMIDITY - Abstract
The article focuses on the performance of rapid diagnostic tests (RDT) for diagnosis of malaria at the China-Myanmar border area. It discusses the importance of RDT in malaria control and management programmes in the world. It states that the performance of RDT under different endemic conditions suggests its requirement for malaria diagnosis. It reports the effect of humidity and extreme temperatures on the performance of RDT.
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- 2013
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18. Genetic deletions and high diversity of Plasmodium falciparum histidine-rich proteins 2 and 3 genes in parasite populations in Ghana.
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Duah-Quashie NO, Opoku-Agyeman P, Bruku S, Adams T, Tandoh KZ, Ennuson NA, Matrevi SA, Abuaku B, Quashie NB, Watters C, Wolfe D, Quijada HM, and Sanders T
- Abstract
Rapid diagnostic tests (RDTs) are used to diagnose malaria in Ghana and other malaria endemic countries. Plasmodium falciparum histidine-rich protein 2 (PFHRP2 ) based RDTs are widely used, however the occurrence of deletions of the pfhrp2 gene in some parasites have resulted in false negative test results. Monoclonal antibodies of PFHRP2 cross reacts with PFHRP3 because they share structural similarities and this complements the detection of the parasites by RDT. These two genes were investigated in Ghanaian P. falciparum parasite population to detect deletions and the polymorphisms in exon 2 of the pfhrp2 and pfhrp3 genes. Parasite isolates (2,540) from children ≤ 12 years with uncomplicated malaria from 2015 to 2020 transmission seasons were used. Both genes were amplified using nested PCR and negative results indicated the presence of the deletion of genes. Amplified genes were sequenced for the detection of the amino acid repeats. Deletions were observed in 30.7% (780/2,540) and 17.2% (438/2,540) of the samples for pfhrp2 and pfhrp3 respectively with increasing trends over the three time periods (χ2 -10.305, p = 0.001). A total of 1,632 amplicons were sequenced for each gene, analysis was done on 1,124 and 1,307 good quality sequences for pfhrp2 and pfhrp3 respectively. Pfhrp2 repeat polymorphisms were dominantly of types 2 (AHHAHHAAD) and 7 (AHHAAD) with large numbers of variants. A novel variant of type 14 (AHHANHATD) was seen for pfhrp2 . For the pfhrp3 repeat types, 16 (AHHAAN), 17 (AHHDG) and 18 (AHHDD) were the dominant types observed. Variants of type 16 (AHHAAH) and (AHHASH) were also dominant. Repeat types 1, 2, 3, 4, 5, 6, 7, 8, 11, 13, 15, 16, and 19 were observed be shared by both genes. The haplotype diversity of both genes ranged between 0.872 and 1 indicating high diversity of the polymorphisms in the isolates. The implication of the findings of the frequencies of the pfhrp2 and pfhrp3 deletions as well as the variants of the main epitopes of the monoclonal antibodies for the RDT (types 2 and 7) in our isolates is an indication of decreased sensitivity of the RDTs in diagnosing malaria infections in Ghana., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2022 Duah-Quashie, Opoku-Agyeman, Bruku, Adams, Tandoh, Ennuson, Matrevi, Abuaku, Quashie, Watters, Wolfe, Quijada and Sanders.)
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- 2022
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19. Reliability of rapid diagnostic tests in diagnosing pregnancy-associated malaria in north-eastern Tanzania.
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Minja, Daniel T. R., Schmiegelow, Christentze, Oesterholt, Mayke, Magistrado, Pamela A., Bostr”m, St‚phanie, John, Davis, Pehrson, Caroline, Andersen, Daniel, Deloron, Philippe, Salanti, Ali, Lemnge, Martha, Luty, Adrian J. F., Alifrangis, Michael, Theander, Thor, and Lusingu, John P. A.
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MALARIA , *PREGNANCY , *MICROSCOPY , *POLYMERASE chain reaction - Abstract
Background: Accurate diagnosis and prompt treatment of pregnancy-associated malaria (PAM) are key aspects in averting adverse pregnancy outcomes. Microscopy is the gold standard in malaria diagnosis, but it has limited detection and availability. When used appropriately, rapid diagnostic tests (RDTs) could be an ideal diagnostic complement to microscopy, due to their ease of use and adequate sensitivity in detecting even sub-microscopic infections. Polymerase chain reaction (PCR) is even more sensitive, but it is mainly used for research purposes. The accuracy and reliability of RDTs in diagnosing PAM was evaluated using microscopy and PCR. Methods: A cohort of pregnant women in north-eastern Tanzania was followed throughout pregnancy for detection of plasmodial infection using venous and placental blood samples evaluated by histidine rich protein 2 (HRP-2) and parasite lactate dehydrogenase (pLDH) based RDTs (Parascreen™ or HRP-2 only (Paracheck Pf® and ParaHIT®f), microscopy and nested Plasmodium species diagnostic PCR. Results: From a cohort of 924 pregnant women who completed the follow up, complete RDT and microscopy data was available for 5,555 blood samples and of these 442 samples were analysed by PCR. Of the 5,555 blood samples, 49 ((proportion and 95% confidence interval) 0.9% [0.7-1.1]) samples were positive by microscopy and 91 (1.6% [1.3-2.0]) by RDT. Forty-six (50.5% [40.5-60.6]) and 45 (49.5% [39.4--59.5]) of the RDT positive samples were positive and negative by microscopy, respectively, whereas nineteen (42.2% [29.0-56.7]) of the microscopy negative, but RDT positive, samples were positive by PCR. Three (0.05% [0.02-0.2]) samples were positive by microscopy but negative by RDT. 351 of the 5,461 samples negative by both RDT and microscopy were tested by PCR and found negative. There was no statistically significant difference between the performances of the different RDTs. Conclusions: Microscopy underestimated the real burden of malaria during pregnancy and RDTs performed better than microscopy in diagnosing PAM. In areas where intermittent preventive treatment during pregnancy may be abandoned due to low and decreasing malaria risk and instead replaced with active case management, screening with RDT is likely to identify most infections in pregnant women and out-performs microscopy as a diagnostic tool. [ABSTRACT FROM AUTHOR]
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- 2012
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20. Systematic review and meta-analysis: rapid diagnostic tests versus placental histology, microscopy and PCR for malaria in pregnant women
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Kattenberg Johanna H, Ochodo Eleanor A, Boer Kimberly R, Schallig Henk DFH, Mens Petra F, and Leeflang Mariska MG
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Malaria ,pregnancy ,malaria in pregnancy (MiP) ,rapid diagnostic tests (RDTs) ,PCR ,microscopy ,histology ,diagnostic test accuracy ,systematic review ,meta-analysis ,Arctic medicine. Tropical medicine ,RC955-962 ,Infectious and parasitic diseases ,RC109-216 - Abstract
Abstract Background During pregnancy, malaria infection with Plasmodium falciparum or Plasmodium vivax is related to adverse maternal health and poor birth outcomes. Diagnosis of malaria, during pregnancy, is complicated by the absence or low parasite densities in peripheral blood. Diagnostic methods, other than microscopy, are needed for detection of placental malaria. Therefore, the diagnostic accuracy of rapid diagnostic tests (RDTs), detecting antigen, and molecular techniques (PCR), detecting DNA, for the diagnosis of Plasmodium infections in pregnancy was systematically reviewed. Methods MEDLINE, EMBASE and Web of Science were searched for studies assessing the diagnostic accuracy of RDTs, PCR, microscopy of peripheral and placental blood and placental histology for the detection of malaria infection (all species) in pregnant women. Results The results of 49 studies were analysed in metandi (Stata), of which the majority described P. falciparum infections. Although both placental and peripheral blood microscopy cannot reliably replace histology as a reference standard for placental P. falciparum infection, many studies compared RDTs and PCR to these tests. The proportion of microscopy positives in placental blood (sensitivity) detected by peripheral blood microscopy, RDTs and PCR are respectively 72% [95% CI 62-80], 81% [95% CI 55-93] and 94% [95% CI 86-98]. The proportion of placental blood microscopy negative women that were negative in peripheral blood microscopy, RDTs and PCR (specificity) are 98% [95% CI 95-99], 94% [95% CI 76-99] and 77% [95% CI 71-82]. Based on the current data, it was not possible to determine if the false positives in RDTs and PCR are caused by sequestered parasites in the placenta that are not detected by placental microscopy. Conclusion The findings suggest that RDTs and PCR may have good performance characteristics to serve as alternatives for the diagnosis of malaria in pregnancy, besides any other limitations and practical considerations concerning the use of these tests. Nevertheless, more studies with placental histology as reference test are urgently required to reliably determine the accuracy of RDTs and PCR for the diagnosis of placental malaria. P. vivax-infections have been neglected in diagnostic test accuracy studies of malaria in pregnancy.
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- 2011
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21. Evaluation of Histidine-Rich Proteins 2 and 3 Gene Deletions in Plasmodium falciparum in Endemic Areas of the Brazilian Amazon.
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Góes L, Chamma-Siqueira N, Peres JM, Nascimento JM, Valle S, Arcanjo AR, Lacerda M, Blume L, Póvoa M, and Viana G
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- Antigens, Protozoan genetics, Brazil epidemiology, Diagnostic Tests, Routine, Gene Deletion, Humans, Malaria, Falciparum, Plasmodium falciparum genetics, Proteins genetics, Protozoan Proteins genetics
- Abstract
Histidine-rich proteins 2 and 3 gene ( pfhrp2 and pfhrp3 ) deletions affect the efficacy of rapid diagnostic tests (RDTs) based on the histidine-rich protein 2 (HRP2), compromising the correct identification of the Plasmodium falciparum species. Therefore, molecular surveillance is necessary for the investigation of the actual prevalence of this phenomenon and the extent of the disappearance of these genes in these areas and other South American countries, thus guiding national malaria control programs on the appropriate use of RDTs. This study aimed to evaluate the pfhrp2 and pfhrp3 gene deletion in P. falciparum in endemic areas of the Brazilian Amazon. Aliquots of DNA from the biorepository of the Laboratory of Basic Research in Malaria, Evandro Chagas Institute, with a positive diagnosis for P. falciparum infection as determined by microscopy and molecular assays, were included. Monoinfection was confirmed by nested-polymerase chain reaction assay, and DNA quality was assessed by amplification of the merozoite surface protein-2 gene ( msp2). The pfhrp2 and pfhrp3 genes were amplified using primers for the region between exons 1 and 2 and for all extension of exon 2. Aliquots of DNA from 192 P. falciparum isolates were included in the study, with 68.7% (132/192) from the municipality of Cruzeiro do Sul (Acre) and 31.3% (60/192) from Manaus (Amazonas). Of this total, 82.8% (159/192) of the samples were considered of good quality. In the state of Acre, 71.7% (71/99) showed pfhrp2 gene deletion and 94.9% (94/99) showed pfhrp3 gene deletion, while in the state of Amazonas, 100.0% (60/60) of the samples showed pfhrp2 gene deletion and 98.3% (59/60) showed pfhrp3 gene deletion. Moreover, 79.8% (127/159) of isolates displayed gene deletion. Our findings confirm the presence of a parasite population with high frequencies of pfhrp2 and pfhrp3 gene deletions in the Brazilian Amazon region. This suggests reconsidering the use of HRP2-based RDTs in the Acre and Amazonas states and calls attention to the importance of molecular surveillance and mapping of pfhrp2/pfhrp3 deletions in this area and in other locations in the Amazon region to guarantee appropriate patient care, control and ultimately contribute to achieving P. falciparum malaria elimination.
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- 2020
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22. Challenges with implementing malaria rapid diagnostic tests at primary care facilities in a Ghanaian district: a qualitative study
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Stephanie K. Yanow, Daniel Ansong, John H Amuasi, Nana Yaa Boadu, Devidas Menon, and Edna F. Einsiedel
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Adult ,Male ,medicine.medical_specialty ,Health Personnel ,030231 tropical medicine ,Staffing ,Ghana ,03 medical and health sciences ,Young Adult ,0302 clinical medicine ,Nursing ,Health care ,parasitic diseases ,Medicine ,Humans ,Health system ,030212 general & internal medicine ,Qualitative Research ,Aged ,Primary Health Care ,business.industry ,Diagnostic Tests, Routine ,Public health ,Research ,Professional development ,Guideline ,Middle Aged ,Primary care ,Focus group ,Rapid diagnostic tests (RDTs) ,Malaria ,Infectious Diseases ,Preparedness ,Practice Guidelines as Topic ,Parasitology ,Female ,Guideline Adherence ,business ,Guideline compliance ,Qualitative research ,Healthcare provider - Abstract
Background Rapid diagnostic Tests (RDTs) for malaria enable diagnostic testing at primary care facilities in resource-limited settings, where weak infrastructure limits the use of microscopy. In 2010, Ghana adopted a test-before-treat guideline for malaria, with RDT use promoted to facilitate diagnosis. Yet healthcare practitioners still treat febrile patients without testing, or despite negative malaria test results. Few studies have explored RDT implementation beyond the notions of provider or patient acceptability. The aim of this study was to identify the factors directly influencing malaria RDT implementation at primary care facilities in a Ghanaian district. Methods Qualitative interviews, focus groups and direct observations were conducted with 50 providers at six purposively selected primary care facilities in the Atwima–Nwabiagya district. Data were analysed thematically. Results RDT implementation was hampered by: (1) healthcare delivery constraints (weak supply chain, limited quality assurance and control, inadequate guideline emphasis, staffing limitations); (2) provider perceptions (entrenched case-management paradigms, limited preparedness for change); (3) social dynamics of care delivery (expected norms of provider-patient interaction, test affordability); and (4) limited provider engagement in policy processes leading to fragmented implementation of health sector reform. Conclusion Limited health system capacity, socio-economic, political, and historical factors hampered malaria RDT implementation at primary care facilities in the study district. For effective RDT implementation providers must be: (1) adequately enabled through efficient allocation and management of essential healthcare commodities; (2) appropriately empowered with the requisite knowledge and skill through ongoing, effective professional development; and (3) actively engaged in policy dialogue to demystify socio-political misconceptions that hinder health sector reform policies from improving care delivery. Clear, consistent guideline emphasis, with complementary action to address deep-rooted provider concerns will build their confidence in, and promote uptake of recommended policies, practices, and technology for diagnosing malaria.
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- 2015
23. Towards subsidized malaria rapid diagnostic tests. Lessons learned from programmes to subsidise artemisinin-based combination therapies in the private sector: a review
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Cristina Lussiana
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Economic growth ,subsidy ,030231 tropical medicine ,Psychological intervention ,malaria ,Reviews ,Affordable Medicines Facility-malaria (AMFm) ,Inappropriate Prescribing ,rapid diagnostic tests (RDTs) ,03 medical and health sciences ,Antimalarials ,0302 clinical medicine ,Order (exchange) ,parasitic diseases ,medicine ,Economics ,Humans ,030212 general & internal medicine ,Artemisinin ,health care economics and organizations ,Cost–benefit analysis ,Public economics ,Diagnostic Tests, Routine ,Health Policy ,Subsidy ,medicine.disease ,Private sector ,Crowding out ,Artemisinins ,Private Sector ,artemisinin-based combination therapies (ACTs) ,Malaria ,medicine.drug - Abstract
The idea of a private sector subsidy programme of artemisinin-based combination therapies (ACTs) was first proposed in 2004. Since then, several countries around the world have hosted pilot projects or programmes on subsidized ACTs and/or the Affordable Medicines Facility-malaria programme (AMFm). Overall the private sector subsidy programmes of ACTs have been effective in increasing availability of ACTs in the private sector and driving down average prices but struggled to crowd out antimalarial monotherapies. The results obtained from this ambitious strategy should inform policy makers in the designing of future interventions aimed to control malaria morbidity and mortality. Among the interventions recently proposed, a subsidy of rapid diagnostic tests (RDTs) in the private sector has been recommended by governments and international donors to cope with over-treatment with ACTs and to delay the emergence of resistance to artemisinin. In order to improve the cost-effectiveness of co-paid RDTs, we should build on the lessons we learned from almost 10 years of private sector subsidy programmes of ACTs in malaria-endemic countries.
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- 2015
24. Performance of two rapid diagnostic tests for malaria diagnosis at the China-Myanmar border area
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Guofa Zhou, Siying Li, Peipei Li, Shuying Li, Juan Yan, Yaming Cao, Liwang Cui, Qi Fan, Ying Wang, Guiyun Yan, Bin Zheng, Nana Li, Zhaoqing Yang, Xu Wei, Zhenjun Zhao, Lili Wang, and Xiaomei Li
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Male ,Plasmodium ovale ,Plasmodium vivax ,Myanmar ,Sensitivity ,0302 clinical medicine ,030212 general & internal medicine ,Child ,Aged, 80 and over ,Microscopy ,Diagnostic test ,Middle Aged ,3. Good health ,PCR ,Infectious Diseases ,Child, Preschool ,Specificity ,Female ,Adult ,China ,medicine.medical_specialty ,Adolescent ,Plasmodium falciparum ,030231 tropical medicine ,Biology ,Sensitivity and Specificity ,Young Adult ,03 medical and health sciences ,parasitic diseases ,medicine ,Humans ,Aged ,Malaria diagnosis ,Clinical Laboratory Techniques ,Diagnostic Tests, Routine ,Research ,Infant ,biology.organism_classification ,medicine.disease ,Virology ,Rapid diagnostic tests (RDTs) ,Malaria ,Parasitology ,Immunology ,Tropical medicine ,Nested polymerase chain reaction - Abstract
Background Rapid diagnostic tests (RDTs) have become an essential tool in the contemporary malaria control and management programmes in the world. This study aims to evaluate the performance of two commonly used RDTs for malaria diagnosis in the China-Myanmar border area. Methods A total 606 febrile patients in the China-Myanmar border were recruited to this study and were diagnosed for malaria infections by microscopy, two RDTs tests (Pf/Pan device, and Pv/Pf device) and nested PCR. Results Malaria parasites were found in 143 patients by microscopy, of which 51, 73, and 19 were Plasmodium falciparum, Plasmodium vivax and P. falciparum/P. vivax mixed infections, respectively. Compared to microscopy, the sensitivity of the Pf/Pan device was 88.6% for P. falciparum and 69.9% for P. vivax with the specificity of 90.4%. For a subset of 350 patients, the sensitivity of the Pf/Pan device and Pv/Pf device for detection of P. falciparum was 87.5% and 91.7%, respectively; and for detection of P. vivax was 72.0% and 73.8%, respectively. The specificity of the Pf/Pan device and Pv/Pf device was 94.3% and 96.5%, respectively. Nested PCR detected malaria parasites in 174 of 606 samples, of which 67, 79, two and 26 were P. falciparum, P. vivax, P. ovale and P. falciparum/P. vivax mixed infections, respectively. Compared to nested PCR, all other methods had sensitivity below 80%, suggesting that a significant number of cases were missed. Conclusions Compared to PCR, both microscopy and RDTs had lower sensitivities. RDTs had similar performance to microscopy for P. falciparum diagnosis, but performed worse for P. vivax diagnosis. Other RDT products should be selected with higher sensitivity (and good specificity) for both P. falciparum and P. vivax diagnosis.
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- 2013
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25. Reliability of rapid diagnostic tests in diagnosing pregnancy-associated malaria in north-eastern Tanzania
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Davis John, Christentze Schmiegelow, Martha M. Lemnge, John Lusingu, Pamela Magistrado, Daniel T. R. Minja, Philippe Deloron, Caroline Pehrson, Ali Salanti, Michael Alifrangis, Thor G. Theander, Mayke Oesterholt, Daniel Andersen, Adrian J. F. Luty, and Stéphanie Boström
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Tanzania ,Cohort Studies ,0302 clinical medicine ,Sensitivity ,Pregnancy ,Medicine ,030212 general & internal medicine ,Prospective Studies ,Pregnancy Complications, Infectious ,Prospective cohort study ,Diagnosis & treatment ,Microscopy ,biology ,Obstetrics ,Pregnancy-Associated Malaria (PAM) ,Reliability ,3. Good health ,Infectious Diseases ,Blood ,Cohort ,Female ,Adult ,Plasmodium falciparum ,medicine.medical_specialty ,lcsh:Arctic medicine. Tropical medicine ,Adolescent ,lcsh:RC955-962 ,Sub-microscopic infections ,030231 tropical medicine ,Antigens, Protozoan ,Sensitivity and Specificity ,Polymerase chain reaction (PCR) ,lcsh:Infectious and parasitic diseases ,03 medical and health sciences ,Young Adult ,parasitic diseases ,Humans ,lcsh:RC109-216 ,Pregnancy-associated malaria ,Pregnancy outcomes ,business.industry ,Clinical Laboratory Techniques ,Diagnostic Tests, Routine ,Research ,Gold standard (test) ,medicine.disease ,biology.organism_classification ,Rapid diagnostic tests (RDTs) ,Malaria ,Parasitology ,Immunology ,business - Abstract
Background Accurate diagnosis and prompt treatment of pregnancy-associated malaria (PAM) are key aspects in averting adverse pregnancy outcomes. Microscopy is the gold standard in malaria diagnosis, but it has limited detection and availability. When used appropriately, rapid diagnostic tests (RDTs) could be an ideal diagnostic complement to microscopy, due to their ease of use and adequate sensitivity in detecting even sub-microscopic infections. Polymerase chain reaction (PCR) is even more sensitive, but it is mainly used for research purposes. The accuracy and reliability of RDTs in diagnosing PAM was evaluated using microscopy and PCR. Methods A cohort of pregnant women in north-eastern Tanzania was followed throughout pregnancy for detection of plasmodial infection using venous and placental blood samples evaluated by histidine rich protein 2 (HRP-2) and parasite lactate dehydrogenase (pLDH) based RDTs (Parascreen™) or HRP-2 only (Paracheck Pf® and ParaHIT®f), microscopy and nested Plasmodium species diagnostic PCR. Results From a cohort of 924 pregnant women who completed the follow up, complete RDT and microscopy data was available for 5,555 blood samples and of these 442 samples were analysed by PCR. Of the 5,555 blood samples, 49 ((proportion and 95% confidence interval) 0.9% [0.7 -1.1]) samples were positive by microscopy and 91 (1.6% [1.3-2.0]) by RDT. Forty-six (50.5% [40.5 - 60.6]) and 45 (49.5% [39.4 – 59.5]) of the RDT positive samples were positive and negative by microscopy, respectively, whereas nineteen (42.2% [29.0 - 56.7]) of the microscopy negative, but RDT positive, samples were positive by PCR. Three (0.05% [0.02 - 0.2]) samples were positive by microscopy but negative by RDT. 351 of the 5,461 samples negative by both RDT and microscopy were tested by PCR and found negative. There was no statistically significant difference between the performances of the different RDTs. Conclusions Microscopy underestimated the real burden of malaria during pregnancy and RDTs performed better than microscopy in diagnosing PAM. In areas where intermittent preventive treatment during pregnancy may be abandoned due to low and decreasing malaria risk and instead replaced with active case management, screening with RDT is likely to identify most infections in pregnant women and out-performs microscopy as a diagnostic tool.
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- 2012
26. Reliability of rapid diagnostic tests in diagnosing pregnancy-associated malaria in north-eastern Tanzania
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Minja, Daniel T., Schmiegelow, Christentze, Oesterholt, Mayke, Magistrado, Pamela A., Boström, Stéphanie, John, Davis, Pehrson, Caroline, Andersen, Daniel, Deloron, Philippe, Salanti, Ali, Lemnge, Martha, Luty, Adrian J., Alifrangis, Michael, Theander, Thor, Lusingu, John P., Minja, Daniel T., Schmiegelow, Christentze, Oesterholt, Mayke, Magistrado, Pamela A., Boström, Stéphanie, John, Davis, Pehrson, Caroline, Andersen, Daniel, Deloron, Philippe, Salanti, Ali, Lemnge, Martha, Luty, Adrian J., Alifrangis, Michael, Theander, Thor, and Lusingu, John P.
- Abstract
Background: Accurate diagnosis and prompt treatment of pregnancy-associated malaria (PAM) are key aspects in averting adverse pregnancy outcomes. Microscopy is the gold standard in malaria diagnosis, but it has limited detection and availability. When used appropriately, rapid diagnostic tests (RDTs) could be an ideal diagnostic complement to microscopy, due to their ease of use and adequate sensitivity in detecting even sub-microscopic infections. Polymerase chain reaction (PCR) is even more sensitive, but it is mainly used for research purposes. The accuracy and reliability of RDTs in diagnosing PAM was evaluated using microscopy and PCR. Methods: A cohort of pregnant women in north-eastern Tanzania was followed throughout pregnancy for detection of plasmodial infection using venous and placental blood samples evaluated by histidine rich protein 2 (HRP-2) and parasite lactate dehydrogenase (pLDH) based RDTs (Parascreen™) or HRP-2 only (Paracheck Pf® and ParaHIT®f), microscopy and nested Plasmodium species diagnostic PCR. Results: From a cohort of 924 pregnant women who completed the follow up, complete RDT and microscopy data was available for 5,555 blood samples and of these 442 samples were analysed by PCR. Of the 5,555 blood samples, 49 ((proportion and 95% confidence interval) 0.9% [0.7 -1.1]) samples were positive by microscopy and 91 (1.6% [1.3-2.0]) by RDT. Forty-six (50.5% [40.5 - 60.6]) and 45 (49.5% [39.4-59.5]) of the RDT positive samples were positive and negative by microscopy, respectively, whereas nineteen (42.2% [29.0 - 56.7]) of the microscopy negative, but RDT positive, samples were positive by PCR. Three (0.05% [0.02 - 0.2]) samples were positive by microscopy but negative by RDT. 351 of the 5,461 samples negative by both RDT and microscopy were tested by PCR and found negative. There was no statistically significant difference between the performances of the different RDTs. Conclusions: Microscopy underestimated the real burden of malaria du
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- 2012
27. Rapid diagnostic tests for malaria and health workers’ adherence to test results at health facilities in Zambia
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Seter Siziya, Christine Manyando, Justin Chileshe, Clive Shiff, and Eric M. Njunju
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Male ,Pediatrics ,medicine.medical_specialty ,Elimination ,Health Personnel ,Psychological intervention ,Zambia ,Febrile illness ,Antimalarials ,Health facility ,parasitic diseases ,medicine ,Humans ,Prospective Studies ,Medical prescription ,Practice Patterns, Physicians' ,Prospective cohort study ,Anti-malarials ,Health centre ,Microscopy ,business.industry ,Diagnostic Tests, Routine ,Public health ,Research ,Infant, Newborn ,Infant ,medicine.disease ,Rapid diagnostic tests (RDTs) ,Malaria ,Infectious Diseases ,Child, Preschool ,Tropical medicine ,Parasitology ,Observational study ,Female ,Guideline Adherence ,Health Facilities ,business - Abstract
Background: In Zambia, there has been a large scaling up of interventions to control malaria in recent years including the deployment of rapid diagnostic tests (RDTs) to improve malaria surveillance data as well as guide malaria treatment in health facilities. The practical challenge is the impact of RDT results on subsequent management of patients. This study explored the role of RDTs in malaria diagnosis and the health workers’ adherence to test results. Methods: An observational prospective study was carried out at health centres in four districts, namely Chibombo, Chingola, Chipata, and Choma. Children under the age of five years with history of fever were recruited and the clinicians’ use of RDT results was observed to establish whether prescriptions were issued prior to the availability of parasitological results or after, and whether RDT results influenced their prescriptions. Results: Of the 2, 393 recruited children, 2, 264 had both RDT and microscopic results. Two in three (68.6%) children were treated with anti-malarials despite negative RDT results and almost half (46.2%) of these were prescribed Coartem®. Only 465 (19.4%) of the 2,393 children were prescribed drugs before receiving laboratory results. A total of 76.5% children were prescribed drugs after laboratory results. Children with RDT positive results were 2.66 (95% CI (2.00, 3.55)) times more likely to be prescribed anti-malarial drugs. Children who presented with fever at admission (although history of fever or presence of fever at admission was an entry criterion) were 42% less likely to be prescribed an anti-malarial drug compared to children who had no fever (AOR = 0.58; 95% CI (0.52, 0.65)). It was noted that proportions of children who were RDT- and microscopy-positive significantly declined over the years from 2005 to 2008. Conclusions: RDTs may contribute to treatment of febrile illness by confirming malaria cases from non-malaria cases in children under the age of five. However, the adherence of the health workers to prescribing anti-malarials to only RDT-positive cases at health facility level will still require to be explored further as their role is crucial in more precise reporting of malaria cases in this era towards malaria elimination as the target.
- Published
- 2014
28. Who to test and how to test for chronic hepatitis C infection – 2016 WHO testing guidance for low- and middle-income countries.
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Easterbrook, Philippa J.
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- *
CHRONIC hepatitis C , *SOCIAL stigma , *HEPATITIS C , *NUCLEIC acid analysis , *PATIENTS , *DIAGNOSIS , *THERAPEUTICS - Abstract
Summary Testing and diagnosis of hepatitis C virus (HCV) infection is the gateway for access to both treatment and prevention services, and crucial for an effective hepatitis epidemic response. In contrast to HIV, a systematic approach to hepatitis C testing has been fragmented and limited to a few countries, and there remains a large burden of undiagnosed cases globally. Key challenges in the current hepatitis testing response, include lack of simple, reliable, and low cost diagnostic tests, laboratory capacity, and testing facilities; inadequate data to guide country-specific hepatitis testing approaches and who to test; stigmatization and social marginalization of some groups with or at risk of viral hepatitis; and lack of international or national guidelines on hepatitis testing for resource-limited settings. New tools to support the hepatitis global response include the 2016 Global Hepatitis Health Sector Strategy which include targets for testing and diagnosis, and World Health Organization (WHO) 2016 hepatitis testing guidelines for adults, adolescents, and children in low- and middle-income countries. The testing guidance complements recent published WHO guidance on the prevention, care and treatment of chronic hepatitis C and hepatitis B infection. These testing guidelines outline the public health approach to strengthening and expanding current testing practices for HCV and HBV and address what serological and virological assays to use, and who to test, as well as interventions to promote linkage to prevention and care after testing. They are intended for use across all age groups and populations. See boxes for key recommendations. Future directions and innovations in viral hepatitis testing include use of point-of-care assays for nucleic acid testing (NAT) and core antigen; validation of dried blood spots specimens with different commercial serological and NAT assays; multiplex and polyvalent platforms for integrated testing of HIV, HBV and HCV; and potential for self-testing. [ABSTRACT FROM AUTHOR]
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- 2016
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29. Systematic review and meta-analysis: rapid diagnostic tests versus placental histology, microscopy and PCR for malaria in pregnant women
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Eleanor A Ochodo, Petra F. Mens, Kimberly R. Boer, Johanna H. Kattenberg, Henk D. F. H. Schallig, Mariska M.G. Leeflang, and Faculteit der Geneeskunde
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medicine.medical_specialty ,lcsh:Arctic medicine. Tropical medicine ,lcsh:RC955-962 ,Placenta ,Plasmodium vivax ,Plasmodium falciparum ,rapid diagnostic tests (RDTs) ,Antigens, Protozoan ,Parasitemia ,Review ,Polymerase Chain Reaction ,lcsh:Infectious and parasitic diseases ,histology ,systematic review ,Pregnancy ,parasitic diseases ,medicine ,Malaria, Vivax ,Humans ,lcsh:RC109-216 ,Malaria, Falciparum ,Pregnancy Complications, Infectious ,Microscopy ,biology ,Obstetrics ,Diagnostic Tests, Routine ,Histocytochemistry ,DNA, Protozoan ,biology.organism_classification ,medicine.disease ,Malaria ,diagnostic test accuracy ,meta-analysis ,Diagnosis of malaria ,medicine.anatomical_structure ,Infectious Diseases ,PCR ,Parasitology ,Immunology ,Female ,malaria in pregnancy (MiP) - Abstract
Background During pregnancy, malaria infection with Plasmodium falciparum or Plasmodium vivax is related to adverse maternal health and poor birth outcomes. Diagnosis of malaria, during pregnancy, is complicated by the absence or low parasite densities in peripheral blood. Diagnostic methods, other than microscopy, are needed for detection of placental malaria. Therefore, the diagnostic accuracy of rapid diagnostic tests (RDTs), detecting antigen, and molecular techniques (PCR), detecting DNA, for the diagnosis of Plasmodium infections in pregnancy was systematically reviewed. Methods MEDLINE, EMBASE and Web of Science were searched for studies assessing the diagnostic accuracy of RDTs, PCR, microscopy of peripheral and placental blood and placental histology for the detection of malaria infection (all species) in pregnant women. Results The results of 49 studies were analysed in metandi (Stata), of which the majority described P. falciparum infections. Although both placental and peripheral blood microscopy cannot reliably replace histology as a reference standard for placental P. falciparum infection, many studies compared RDTs and PCR to these tests. The proportion of microscopy positives in placental blood (sensitivity) detected by peripheral blood microscopy, RDTs and PCR are respectively 72% [95% CI 62-80], 81% [95% CI 55-93] and 94% [95% CI 86-98]. The proportion of placental blood microscopy negative women that were negative in peripheral blood microscopy, RDTs and PCR (specificity) are 98% [95% CI 95-99], 94% [95% CI 76-99] and 77% [95% CI 71-82]. Based on the current data, it was not possible to determine if the false positives in RDTs and PCR are caused by sequestered parasites in the placenta that are not detected by placental microscopy. Conclusion The findings suggest that RDTs and PCR may have good performance characteristics to serve as alternatives for the diagnosis of malaria in pregnancy, besides any other limitations and practical considerations concerning the use of these tests. Nevertheless, more studies with placental histology as reference test are urgently required to reliably determine the accuracy of RDTs and PCR for the diagnosis of placental malaria. P. vivax-infections have been neglected in diagnostic test accuracy studies of malaria in pregnancy.
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- 2011
30. Malaria diagnosis and mapping with m-Health and geographic information systems (GIS): evidence from Uganda
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Alberto Larocca, Roberto Moro Visconti, and Michele Marconi
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Male ,Veterinary medicine ,Geographic information system ,Malaria mapping ,Information communication technology (ICT) ,Process innovation ,0302 clinical medicine ,Health care ,Medicine ,Uganda ,Mobile phones ,Rapid Diagnostic Tests (RDTs) ,030212 general & internal medicine ,Malaria, Falciparum ,Child ,Socioeconomics ,Aged, 80 and over ,education.field_of_study ,Healthcare ,Middle Aged ,Telemedicine ,Medical services ,Infectious Diseases ,Child, Preschool ,Cellular network ,Female ,Topography, Medical ,Geographic information systems (GIS) ,Geospatial health technology ,Rapid diagnostic tests (RDTs) ,Remote diagnosis ,Adult ,medicine.medical_specialty ,lcsh:Arctic medicine. Tropical medicine ,Adolescent ,lcsh:RC955-962 ,Plasmodium falciparum ,030231 tropical medicine ,Population ,healthcare ,Settore MED/17 - MALATTIE INFETTIVE ,lcsh:Infectious and parasitic diseases ,Young Adult ,03 medical and health sciences ,parasitic diseases ,Humans ,lcsh:RC109-216 ,education ,Aged ,Diagnostic Tests, Routine ,business.industry ,Research ,Public health ,Infant, Newborn ,Infant ,medicine.disease ,Information and Communications Technology ,Geographic Information Systems ,Parasitology ,business ,Malaria - Abstract
Background Rural populations experience several barriers to accessing clinical facilities for malaria diagnosis. Increasing penetration of ICT and mobile-phones and subsequent m-Health applications can contribute overcoming such obstacles. Methods GIS is used to evaluate the feasibility of m-Health technologies as part of anti-malaria strategies. This study investigates where in Uganda: (1) malaria affects the largest number of people; (2) the application of m-Health protocol based on the mobile network has the highest potential impact. Results About 75% of the population affected by Plasmodium falciparum malaria have scarce access to healthcare facilities. The introduction of m-Health technologies should be based on the 2G protocol, as 3G mobile network coverage is still limited. The western border and the central-Southeast are the regions where m-Health could reach the largest percentage of the remote population. Six districts (Arua, Apac, Lira, Kamuli, Iganga, and Mubende) could have the largest benefit because they account for about 28% of the remote population affected by falciparum malaria with access to the 2G mobile network. Conclusions The application of m-Health technologies could improve access to medical services for distant populations. Affordable remote malaria diagnosis could help to decongest health facilities, reducing costs and contagion. The combination of m-Health and GIS could provide real-time and geo-localized data transmission, improving anti-malarial strategies in Uganda. Scalability to other countries and diseases looks promising.
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