20 results on '"prohorov metric"'
Search Results
2. Correctly modeling plant-insect-herbivore-pesticide interactions as aggregate data
- Author
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H. T. Banks, John E. Banks, Jared Catenacci, Michele Joyner, and John Stark
- Subjects
plant-insect interactions ,inverse problems ,hypothesis testing and standard errors in dynamical models ,aggregate data ,prohorov metric ,Biotechnology ,TP248.13-248.65 ,Mathematics ,QA1-939 - Abstract
We consider a population dynamics model in investigating data from controlled experiments with aphids in broccoli patches surrounded by different margin types (bare or weedy ground) and three levels of insecticide spray (no, light, or heavy spray). The experimental data is clearly aggregate in nature. In previous efforts [1], the aggregate nature of the data was ignored. In this paper, we embrace this aspect of the experiment and correctly model the data as aggregate data, comparing the results to the previous approach. We discuss cases in which the approach may provide similar results as well as cases in which there is a clear difference in the resulting fit to the data.
- Published
- 2020
- Full Text
- View/download PDF
3. DISTANCES BETWEEN STATIONARY DISTRIBUTIONS OF DIFFUSIONS AND SOLVABILITY OF NONLINEAR FOKKER-PLANCK-KOLMOGOROV EQUATIONS.
- Author
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BOGACHEV, V. I., KIRILLOV, A. I., and SHAPOSHNIKOV, S. V.
- Subjects
- *
FOKKER-Planck equation , *PARTIAL differential equations , *MATHEMATICAL models , *STATIONARY states (Quantum mechanics) , *PROBABILITY theory - Abstract
This paper is concerned with investigation of stationary distributions of diffusion processes. We obtain estimates for the Kantorovich, Prohorov, and total variation distances between stationary distributions of diffusions with different diffusion matrices and different drift coefficients. Applications are given to nonlinear stationary Fokker-Planck-Kolmogorov equations, for which new conditions for the existence and uniqueness of probability solutions are found; moreover, these conditions are optimal in a sense. [ABSTRACT FROM AUTHOR]
- Published
- 2018
- Full Text
- View/download PDF
4. ON THE DYNAMICS OF INDUCED MAPS ON THE SPACE OF PROBABILITY MEASURES.
- Author
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BERNARDES JR., NILSON C. and VERMERSCH, RÔMULO M.
- Subjects
- *
PROBABILITY theory , *HOMEOMORPHISMS , *TOPOLOGICAL entropy , *METRIC spaces , *CHAOS theory - Abstract
For the generic continuous map and for the generic homeomorphism of the Cantor space, we study the dynamics of the induced map on the space of probability measures, with emphasis on the notions of Li-Yorke chaos, topological entropy, equicontinuity, chain continuity, chain mixing, shadowing and recurrence. We also establish some results concerning induced maps that hold on arbitrary compact metric spaces. [ABSTRACT FROM AUTHOR]
- Published
- 2016
- Full Text
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5. Quantifying the degradation in thermally treated ceramic matrix composites.
- Author
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Banks, H. T., Catenacci, Jared, and Criner, Amanda
- Subjects
- *
FIBER-reinforced ceramics , *BIODEGRADATION , *NONPARAMETRIC estimation , *INDUSTRIAL efficiency , *PROBABILITY density function - Abstract
Reflectance spectroscopy obtained from thermally treated silicon nitride carbon based ceramic matrix composites is used to quantity the oxidation products SiO2 and SiN. The data collection is described in detail in order to point out the potential biasing present in the data processing. A probability distribution is imposed on selected model parameters, and then nonparametrically estimated. A non-parametric estimation is chosen since the exact composition of the material is unknown due to the inherent heterogeneity of ceramic composites. The probability distribution is estimated using the Prohorov metric framework in which the infinite dimensional optimization is reduced to a finite dimensional optimization using an approximating space composed of linear splines. A weighted least squares estimation is carried out, and uncertainty quantification is performed on the model parameters, including a piecewise asymptotic confidence band for the estimated probability density. Our estimation results indicate a distinguishable increase in the SiO2 present in the samples which were heat treated for 100 hours compared to those treated for 10 hours. [ABSTRACT FROM AUTHOR]
- Published
- 2016
- Full Text
- View/download PDF
6. Aggregate data and the Prohorov Metric Framework: Efficient gradient computation.
- Author
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Banks, H.T. and Catenacci, Jared
- Subjects
- *
MATRICES (Mathematics) , *INVERSE problems , *DISTRIBUTION (Probability theory) , *PARAMETER estimation , *LEAST squares , *SPLINES - Abstract
We discuss efficient methods for computing gradients in inverse problems for estimation of distributions for individual parameters in models where only aggregate or population level data is available. The ideas are illustrated with two examples arising in applications. [ABSTRACT FROM AUTHOR]
- Published
- 2016
- Full Text
- View/download PDF
7. Convergence of bi-measure R-trees and the pruning process.
- Author
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Löhr, Wolfgang, Voisin, Guillaume, and Winter, Anita
- Subjects
- *
STOCHASTIC convergence , *TREE graphs , *MARKOV processes , *DERIVATIVES (Mathematics) , *TOPOLOGY - Abstract
In (Ann. Inst. Henri Poincaré Probab. Stat. 34 (1998) 637-686) a tree-valued Markov chain is derived by pruning off more and more subtrees along the edges of a Galton-Watson tree. More recently, in (Ann. Probab. 40 (2012) 1167-1211), a continuous analogue of the tree-valued pruning dynamics is constructed along Lévy trees. In the present paper, we provide a new topology which allows to link the discrete and the continuous dynamics by considering them as instances of the same strong Markov process with different initial conditions. We construct this pruning process on the space of so-called bi-measure trees, which are metric measure spaces with an additional pruning measure. The pruning measure is assumed to be finite on finite trees, but not necessarily locally finite. We also characterize the pruning process analytically via its Markovian generator and show that it is continuous in the initial bi-measure tree. A series of examples is given, which include the finite variance offspring case where the pruning measure is the length measure on the underlying tree. [ABSTRACT FROM AUTHOR]
- Published
- 2015
- Full Text
- View/download PDF
8. Correctly modeling plant-insect-herbivore-pesticide interactions as aggregate data
- Author
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Michele L. Joyner, Harvey Thomas Banks, Jared Catenacci, John D. Stark, and John E. Banks
- Subjects
hypothesis testing and standard errors in dynamical models ,Insecta ,Population ,Population Dynamics ,02 engineering and technology ,Margin (machine learning) ,0502 economics and business ,Statistics ,QA1-939 ,0202 electrical engineering, electronic engineering, information engineering ,Animals ,Herbivory ,Pesticides ,education ,Mathematics ,Herbivore ,education.field_of_study ,aggregate data ,inverse problems ,Applied Mathematics ,05 social sciences ,Aggregate (data warehouse) ,Experimental data ,General Medicine ,plant-insect interactions ,Pesticide ,prohorov metric ,Computational Mathematics ,Modeling and Simulation ,Aphids ,020201 artificial intelligence & image processing ,Aggregate data ,General Agricultural and Biological Sciences ,TP248.13-248.65 ,050203 business & management ,Biotechnology - Abstract
We consider a population dynamics model in investigating data from controlled experiments with aphids in broccoli patches surrounded by different margin types (bare or weedy ground) and three levels of insecticide spray (no, light, or heavy spray). The experimental data is clearly aggregate in nature. In previous efforts [1], the aggregate nature of the data was ignored. In this paper, we embrace this aspect of the experiment and correctly model the data as aggregate data, comparing the results to the previous approach. We discuss cases in which the approach may provide similar results as well as cases in which there is a clear difference in the resulting fit to the data.
- Published
- 2020
9. Bootstrapping for Significance of Compact Clusters in Multidimensional Datasets.
- Author
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Maitra, Ranjan, Melnykov, Volodymyr, and Lahiri, SoumendraN.
- Subjects
- *
STATISTICAL bootstrapping , *SIMULATION methods & models , *CLUSTER analysis (Statistics) , *METHODOLOGY , *OPTICAL resolution - Abstract
This article proposes a bootstrap approach for assessing significance in the clustering of multidimensional datasets. The procedure compares two models and declares the more complicated model a better candidate if there is significant evidence in its favor. The performance of the procedure is illustrated on two well-known classification datasets and comprehensively evaluated in terms of its ability to estimate the number of components via extensive simulation studies, with excellent results. The methodology is also applied to the problem of k-means color quantization of several standard images in the literature and is demonstrated to be a viable approach for determining the minimal and optimal numbers of colors needed to display an image without significant loss in resolution. Additional illustrations and performance evaluations are provided in the online supplementary material. [ABSTRACT FROM AUTHOR]
- Published
- 2012
- Full Text
- View/download PDF
10. Convergence in distribution of random metric measure spaces (Λ-coalescent measure trees).
- Author
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Greven, Andreas, Pfaffelhuber, Peter, and Winter, Anita
- Subjects
- *
PROBABILITY theory , *STOCHASTIC convergence , *METRIC system , *DISTRIBUTION (Probability theory) , *GENEALOGY , *INVARIANT subspaces - Abstract
We consider the space of complete and separable metric spaces which are equipped with a probability measure. A notion of convergence is given based on the philosophy that a sequence of metric measure spaces converges if and only if all finite subspaces sampled from these spaces converge. This topology is metrized following Gromov’s idea of embedding two metric spaces isometrically into a common metric space combined with the Prohorov metric between probability measures on a fixed metric space. We show that for this topology convergence in distribution follows—provided the sequence is tight—from convergence of all randomly sampled finite subspaces. We give a characterization of tightness based on quantities which are reasonably easy to calculate. Subspaces of particular interest are the space of real trees and of ultra-metric spaces equipped with a probability measure. As an example we characterize convergence in distribution for the (ultra-)metric measure spaces given by the random genealogies of the Λ-coalescents. We show that the Λ-coalescent defines an infinite (random) metric measure space if and only if the so-called “dust-free”-property holds. [ABSTRACT FROM AUTHOR]
- Published
- 2009
- Full Text
- View/download PDF
11. A PROBABILISTIC MULTISCALE APPROACH TO HYSTERESIS IN SHEAR WAVE PROPAGATION IN BIOTISSUE.
- Author
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Banks, H. T. and Pinter, Gabriella A.
- Subjects
- *
WAVES (Physics) , *VISCOELASTIC materials , *HYSTERESIS , *PARTIAL differential equations , *APPROXIMATION theory - Abstract
Motivated by a problem involving wave propagation through viscoelastic biotissue, we present a theoretical framework for treating hysteresis as multiscale phenomena which must be averaged across distributions of internal variables. The resulting systems entail probability measure-dependent partial differential equations for which we establish well-posedness in a framework that leads readily to computationally useful approximations. [ABSTRACT FROM AUTHOR]
- Published
- 2005
- Full Text
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12. Rates of weak convergence for images of measures by families of mappings
- Author
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Mas, André
- Subjects
- *
BANACH spaces , *CONVERGENCE (Telecommunication) - Abstract
Suppose
μn is a sequence of measures on a separable metric space converging weakly toμ with rateπn (in the Prohorov metric). We find a new rate of convergence ofμnf−1 toμf−1 , wheref belongs to a wide class of functions between two Banach spaces. [Copyright &y& Elsevier]- Published
- 2002
- Full Text
- View/download PDF
13. Correctly modeling plant-insect-herbivore-pesticide interactions as aggregate data.
- Author
-
Banks HT, Banks JE, Catenacci J, Joyner M, and Stark J
- Subjects
- Animals, Herbivory, Insecta, Population Dynamics, Aphids, Pesticides
- Abstract
We consider a population dynamics model in investigating data from controlled experiments with aphids in broccoli patches surrounded by different margin types (bare or weedy ground) and three levels of insecticide spray (no, light, or heavy spray). The experimental data is clearly aggregate in nature. In previous efforts [1], the aggregate nature of the data was ignored. In this paper, we embrace this aspect of the experiment and correctly model the data as aggregate data, comparing the results to the previous approach. We discuss cases in which the approach may provide similar results as well as cases in which there is a clear difference in the resulting fit to the data.
- Published
- 2019
- Full Text
- View/download PDF
14. Convergence of bi-measure $\mathbb{R}$-trees and the pruning process
- Author
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Wolfgang Löhr, Guillaume Voisin, and Anita Winter
- Subjects
Statistics and Probability ,Prohorov metric ,Pointed Gromov-weak topology ,Measure (mathematics) ,05C05 ,Non-locally finite measures ,Mathematics::Probability ,60J25 ,60F05 ,CRT ,Pruning (decision trees) ,60G55 ,Statistics, Probability and Uncertainty ,Real trees ,Pruning procedure ,Tree-valued Markov process ,Humanities ,60B12 ,Mathematics ,05C10 - Abstract
Dans (Ann. Inst. Henri Poincare Probab. Stat. 34 (1998) 637–686), les auteurs obtiennent une chaine de Markov a valeurs arbres en elaguant de plus en plus de sous-arbres le long des nœuds d’un arbre de Galton–Watson. Plus recemment dans (Ann. Probab. 40 (2012) 1167–1211), un analogue continu de la dynamique d’elagage a valeurs arbres est construit sur des arbres de Levy. Dans cet article, nous presentons une nouvelle topologie qui permet de relier les dynamiques discretes et continues en les considerant comme des exemples du meme processus de Markov fort avec des conditions initiales differentes. Nous construisons ce processus d’elagage sur l’espace des arbres appeles bi-mesures, qui sont des espaces metriques mesures avec une mesure d’elagage additionnelle. La mesure d’elagage est supposee finie sur les arbres finis, mais pas necessairement localement finie. De plus, nous caracterisons analytiquement le processus d’elagage par son generateur infinitesimal et montrons qu’il est continu en son arbre bi-mesure initial. Plusieurs exemples sont donnes, notamment le cas d’une loi de reproduction a variance finie ou la mesure d’elagage est la mesure des longueurs sur l’arbre sous-jacent.
- Published
- 2015
15. Existence of mark functions in marked metric measure spaces
- Author
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Sandra Kliem and Wolfgang Loehr
- Subjects
Statistics and Probability ,Closed set ,Intrinsic metric ,60J25 ,FOS: Mathematics ,mark function ,Mathematics ,60K35 (Primary), 60J25, 60G17, 60G57 (Secondary) ,Discrete mathematics ,Prohorov metric ,Gromov-weak topology ,Injective metric space ,Probability (math.PR) ,tree-valued Fleming-Viot process ,Convex metric space ,60K35 ,60G17 ,Mathematik ,Metric (mathematics) ,60G57 ,Polish space ,marked metric measure space ,Statistics, Probability and Uncertainty ,mutation ,Metric differential ,Subspace topology ,Mathematics - Probability ,Lusin's theorem - Abstract
We give criteria on the existence of a so-called mark function in the context of marked metric measure spaces (mmm-spaces). If an mmm-space admits a mark function, we call it functionally-marked metric measure space (fmm-space). This is not a closed property in the usual marked Gromov-weak topology, and thus we put particular emphasis on the question under which conditions it carries over to a limit. We obtain criteria for deterministic mmm-spaces as well as random mmm-spaces and mmm-space-valued processes. As an example, our criteria are applied to prove that the tree-valued Fleming-Viot dynamics with mutation and selection from [Depperschmidt, Greven, Pfaffelhuber, Ann. Appl. Probab. '12] admits a mark function at all times, almost surely. Thereby, we fill a gap in a former proof of this fact, which used a wrong criterion. Furthermore, the subspace of fmm-spaces, which is dense and not closed, is investigated in detail. We show that there exists a metric that induces the marked Gromov-weak topology on this subspace and is complete. Therefore, the space of fmm-spaces is a Polish space. We also construct a decomposition into closed sets which are related to the case of uniformly equicontinuous mark functions., 22 pages. Journal version, only minor changes
- Published
- 2015
16. Convergence of bi-measure R-tree and the pruning process
- Author
-
Löhr, Wolfgang, Voisin, Guillaume, Winter, Anita, Universität Duisburg-Essen [Essen], Laboratoire de Mathématiques d'Orsay (LM-Orsay), and Université Paris-Sud - Paris 11 (UP11)-Centre National de la Recherche Scientifique (CNRS)
- Subjects
Prohorov metric ,[MATH.MATH-PR]Mathematics [math]/Probability [math.PR] ,60F05, 60B12, 60J25, 05C05, 05C10, 60G55 ,Mathematics::Probability ,Probability (math.PR) ,FOS: Mathematics ,pruning procedure ,pointed Gromov-weak topology ,CRT ,real trees ,tree-valued Markov process ,non-locally finite measures ,Mathematics - Probability - Abstract
In [Aldous,Pitman,1998] a tree-valued Markov chain is derived by pruning off more and more subtrees along the edges of a Galton-Watson tree. More recently, in [Abraham,Delmas,2012], a continuous analogue of the tree-valued pruning dynamics is constructed along L\'evy trees. In the present paper, we provide a new topology which allows to link the discrete and the continuous dynamics by considering them as instances of the same strong Markov process with different initial conditions. We construct this pruning process on the space of so-called bi-measure trees, which are metric measure spaces with an additional pruning measure. The pruning measure is assumed to be finite on finite trees, but not necessarily locally finite. We also characterize the pruning process analytically via its Markovian generator and show that it is continuous in the initial bi-measure tree. A series of examples is given, which include the finite variance offspring case where the pruning measure is the length measure on the underlying tree.
- Published
- 2013
17. Marked metric measure spaces
- Author
-
Andreas Greven, Peter Pfaffelhuber, and Andrej Depperschmidt
- Subjects
Statistics and Probability ,Prohorov metric ,60B10 ,Injective metric space ,Probability (math.PR) ,05C80 ,Metric measure space ,Pseudometric space ,Intrinsic metric ,Convex metric space ,Combinatorics ,Gromov metric triples ,Metric space ,Gromov- weak topology ,Population model ,FOS: Mathematics ,Classical Wiener space ,Polish space ,60B05 ,Statistics, Probability and Uncertainty ,Real line ,60B12 ,Mathematics - Probability ,Mathematics - Abstract
A marked metric measure space (mmm-space) is a triple (X,r,mu), where (X,r) is a complete and separable metric space and mu is a probability measure on XxI for some Polish space I of possible marks. We study the space of all (equivalence classes of) marked metric measure spaces for some fixed I. It arises as state space in the construction of Markov processes which take values in random graphs, e.g. tree-valued dynamics describing randomly evolving genealogical structures in population models. We derive here the topological properties of the space of mmm-spaces needed to study convergence in distribution of random mmm-spaces. Extending the notion of the Gromov-weak topology introduced in (Greven, Pfaffelhuber and Winter, 2009), we define the marked Gromov-weak topology, which turns the set of mmm-spaces into a Polish space. We give a characterization of tightness for families of distributions of random mmm- spaces and identify a convergence determining algebra of functions, called polynomials., 15 pages
- Published
- 2011
18. Least Squares Estimation of Probability Measures in the Prohorov Metric Framework
- Author
-
NORTH CAROLINA STATE UNIV AT RALEIGH CENTER FOR RESEARCH IN SCIENTIFIC COMPUTATION, Banks, H T, Thompson, W C, NORTH CAROLINA STATE UNIV AT RALEIGH CENTER FOR RESEARCH IN SCIENTIFIC COMPUTATION, Banks, H T, and Thompson, W C
- Abstract
We consider nonparametric estimation of probability measures for parameters in problems where only aggregate (population level) data are available. We summarize an existing computational method for the estimation problem which has been developed over the past several decades. Significant new theoretical results are presented which establish the existence and consistency of very general (ordinary, generalized and other) least squares estimates for the measure estimation problem.
- Published
- 2012
19. Subtree prune and regraft: a reversible real tree-valued Markov process
- Author
-
Anita Winter and Steven N. Evans
- Subjects
Statistics and Probability ,excursion theory ,Markov process ,Real tree ,Quantitative Biology - Quantitative Methods ,symbols.namesake ,Mathematics - Metric Geometry ,60J25 ,Random tree ,92B10 ,FOS: Mathematics ,Quantitative Biology::Populations and Evolution ,phylogenetic tree ,Quantitative Biology - Populations and Evolution ,Quantitative Methods (q-bio.QM) ,Probability measure ,Mathematics ,Discrete mathematics ,Prohorov metric ,Stationary distribution ,60J25, 60J75 (Primary) 92B10 (Secondary) ,Markov chain ,Dirichlet form ,Probability (math.PR) ,Populations and Evolution (q-bio.PE) ,Metric Geometry (math.MG) ,Brownian excursion ,Gromov–Hausdorff metric ,Markov chain Monte Carlo ,continuum random tree ,path decomposition ,FOS: Biological sciences ,Mathematik ,symbols ,simulated annealing ,Statistics, Probability and Uncertainty ,60J75 ,Mathematics - Probability - Abstract
We use Dirichlet form methods to construct and analyze a reversible Markov process, the stationary distribution of which is the Brownian continuum random tree. This process is inspired by the subtree prune and regraft (SPR) Markov chains that appear in phylogenetic analysis. A key technical ingredient in this work is the use of a novel Gromov--Hausdorff type distance to metrize the space whose elements are compact real trees equipped with a probability measure. Also, the investigation of the Dirichlet form hinges on a new path decomposition of the Brownian excursion., Comment: Published at http://dx.doi.org/10.1214/009117906000000034 in the Annals of Probability (http://www.imstat.org/aop/) by the Institute of Mathematical Statistics (http://www.imstat.org)
- Published
- 2005
- Full Text
- View/download PDF
20. Subtree Prune and Regraft: A Reversible Real Tree-Valued Markov Process
- Author
-
Evans, Steven N. and Winter, Anita
- Published
- 2006
- Full Text
- View/download PDF
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