20,787 results on '"polyporaceae"'
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2. Lanostane triterpenoids from artificially cultivated fruiting bodies of Ganoderma cf. mastoporum.
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Yangchum, Arunrat, Rachtawee, Pranee, Srichomthong, Kitlada, Choeyklin, Rattaket, Boonpratuang, Thitiya, Thongpanchang, Chawanee, and Isaka, Masahiko
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FRUITING bodies (Fungi) ,GANODERMA ,TRITERPENOIDS ,COUMARINS ,MASS spectrometry ,BIOACTIVE compounds - Abstract
In the quest for bioactive compounds from Ganoderma, artificially cultivated fruiting bodies of Ganoderma cf. mastoporum, strain TBRC-BCC 47851 were chemically investigated. The study led to the isolation of three undescribed lanostane triterpenoids (1–3) together with twelve known compounds. The structures were elucidated on the basis of NMR spectroscopic and mass spectrometry data. The new compounds were inactive in the antimalarial and antitubercular activity assays. [ABSTRACT FROM AUTHOR]
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- 2024
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3. Qualitative Analysis of Bioactive Compounds from different Polypores from Kolhapur District.
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Patil, Anjali Rajendra, Vedpathak, Mrunalini Ajitkumar, and Patil, Yogesh Sadashiv
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FUNGI ,POLYPORACEAE ,BASIDIOMYCOTA ,BIOACTIVE compounds ,FREE radicals - Abstract
It is now widely recognized that biological activity occurs throughout the fungal kingdom. Since ancient times so called mushrooms belonging to Basidiomycota have been used for medicinal purpose. Various bioactive compounds show important biological activities such as antioxidative, free radical scavenging, anticarcinogenic, immunomodulatory, antiviral, and antibacterial etc. In earlier times, mushrooms were originally regarded as a significant source of medicinal in oriental regions. Discovering new major medicines is becoming a great challenge for scientific community. The present study deals with qualitative analysis and identifies the different classes of bioactive compounds as well as their potential therapeutic properties in three different polypores viz. Earliella scabrosa, Podoscypha petalodes and Polyporus grammocephalous. This information can provide insight about the bioactivity and metabolite production from these Polypore fungi, which can potentially lead to the development of new drugs. [ABSTRACT FROM AUTHOR]
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- 2024
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4. Taxonomic reinvestigation of Favolus in the Neotropics utilizing morphological and multigene phylogenetic analyses.
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Zabin, Denis Augusto, Spirin, Viacheslav, Vlasák, Josef, Coelho-Nascimento, Cristiano, and Menolli Jr., Nelson
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Favolus is a genus of white-rot polypores with a worldwide distribution, characterized by laterally attached, fleshy to flexible basidiomata, and mostly large, radially elongated pores. The generic type, Favolus brasiliensis, originally described from Brazil, has been recently suggested as a species complex based on DNA data. Additionally, new species have been described based on morphological and molecular data without, however, addressing potential earlier available names. Thus, a thorough revision of type specimens of the Neotropical taxa currently associated with Favolus (Polyporus) tenuiculus was conducted. Further morphological studies and multigene (ITS, nucLSU, TEF1, and RPB1) phylogenetic analyses of the newly collected Favolus specimens from the Atlantic Forest of Brazil and other localities in the Neotropics were carried out. In total, 127 new sequences (62 ITS, 30 nucLSU, 22 TEF1, and 13 RPB1) of Favolus species were generated. GenBank sequences of two type specimens incorporated in our analyses clarified the phylogenetic position of F. elongoporus, a species previously described from Brazil, and proved a new combination in Favolus for Polyporus laetiporoides, a recently described species from Costa Rica. In contrast to the previous phylogenetic studies that recognized two supported clades among F. brasiliensis sequences as two probable species, the present study advocates for a broader concept as a single species. Moreover, we select a lectotype and a new epitype for F. brasiliensis and discuss its identity versus P. tenuiculus. Morphological studies and molecular data of new collections and older type specimens support the recovery of Favolus reniformis and Hexagonia rhombipora as distinct species of Favolus. Additionally, F. tessellatus, F. trigonus and F. pseudoprinceps are justified as older names for the recently described F. rugulosus, F. radiatifibrillosus and F. yanomamii, respectively. Detailed morphological descriptions of the collections and pure cultures obtained for this study are provided, along with comments, illustrations, and a key for species of Favolus from the Neotropics. [ABSTRACT FROM AUTHOR]
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- 2024
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5. Novelties in Funalia and the status of Fomitella (Polyporaceae, Basidiomycota).
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DE OLIVEIRA, Virton Rodrigo TARGINO, Roberto de Assis ALVES, Paulo, Correia de LIMA-JÚNIOR, Nelson, SANTOS, Carla, LIMA, Nelson, RYVARDEN, Leif, VLASÁK, Josef, and GIBERTONI, Tatiana Baptista
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FUNGI classification , *POLYPORACEAE , *PHYLOGENY , *BASIDIOMYCOTA , *SYNONYMS - Abstract
During studies on the taxonomical delimitation of some species of Funalia, some inconsistencies were observed in the genus. Based on morphological and phylogenetic analyses, the generic type Fomitella supina was positioned within the Funalia clade; thus, the synonymization of the genus and the new combination of Funalia supina are proposed. Funalia glabrorigens is also combined in the genus, while F. hainanensis is suggested as a synonym of F. floccosa, and F. rigida is assumed as a distinct species geographically separated from F. floccosa. A table with morphological comparison of the 10 Funalia species confirmed by molecular analyses is also presented. [ABSTRACT FROM AUTHOR]
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- 2024
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6. Fomes weberianus, 50 years of taxonomic confusion: lectotypification and taxonomic notes.
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Decock, Cony, Cabarroi-Hernández, Milay, Guzmán-Dávalos, Laura, Kirk, Paul M., García-Beltrán, José Ángel, and Amalfi, Mario
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GANODERMA , *POLYPORACEAE , *BASIDIOMYCOTA , *SPECIES - Abstract
Fomes weberianus Bres. & Henn. ex Sacc. is currently the basionym of two very distinct polypores (Basidiomycota), Ganoderma weberianum (Polyporales) and Phylloporia weberiana (Hymenochaetales). This fact has led to almost fifty years of taxonomic confusion. Fomes weberianus was first lectotypified by Steyaert, who accepted the species as G. weberianum. However, studies of Weber's original material in B, duplicate material in S, the protologue, and early interpretations of the name have shown that Steyaert's choice conflicts with the protologue and early interpretations, and that his interpretation as a species of Ganoderma is erroneous. A new lectotype was designated and the species was re-described under the correct interpretation Phylloporia weberiana. [ABSTRACT FROM AUTHOR]
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- 2024
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7. Morphological and molecular data reveal Cerrena caulinicystidiata sp. nov. and Polyporus minutissimus sp. nov. in Polyporales from Asia.
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Zheng, Zi-Wei, Zhang, Qiu-Yue, Zhang, Li-Rong, Yuan, Hai-Sheng, and Wu, Fang
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BASIDIOSPORES , *STRIPE rust , *WOOD-decaying fungi - Abstract
Two new species of Polyporales, Cerrena caulinicystidiata and Polyporus minutissimus, are illustrated and described on the basis of morphological studies and phylogenetic analyses from southern China and Vietnam. C. caulinicystidiata is characterized by annual, resupinate, sometimes effused-reflexed basidiocarps, greyish orange to brownish orange pore surface, irregular pores (3–8 per mm), a trimitic hyphal system, pyriform to ventricose cystidia, and subglobose basidiospores 3.2–4.5 × 2.8–3.5 µm in size. P. minutissimus is characterized by annual, solitary, fan-shaped with a depressed center or infundibuliform basidiocarps, obvious black stipe, cream to buff yellow pileal surface with glabrous, occasionally zonate and radially aligned stripes, angular pores (6–9 per mm), a dimitic hyphal system, and cylindrical basidiospores, 5–9.2 × 2.2–4 μm. Detailed descriptions and illustrations of the two new species are provided. The differences between the two new species and their morphologically similar and phylogenetically related species are discussed. [ABSTRACT FROM AUTHOR]
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- 2024
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8. Macrofungal Species Richness and Composition of Acre State, Amazon, Brazil: State of the Art.
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Teixeira-Silva, Márcia de Araújo, da Silva, Chirley Gonçalves, Santos, Geyse Souza, Carvalho, Clarice Maia, Cortez, Vagner Gularte, and Silveira, Marcos
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SPECIES diversity , *NUMBERS of species , *MACROFUNGI , *BOTANICAL gardens , *POLYPORACEAE , *SPATIAL variation - Abstract
Data on fungi in the state of Acre lack systematization. A total of 99 species have been recorded, but actual numbers of macrofungi and species composition in local forests are still unknown. In the present study, we sought to produce a checklist of macrofungi collected in Acre, between the years 1901 and 2020. We retrieved and organized information about specimens deposited in the databases of the mycological collections of the New York Botanical Garden and Louisiana State University, and the records made available on the speciesLink platform of the Reference Center for Environmental Information. We added to the information the macrofungi that were published in articles, up to the year 2020. Over 120 years of botanical history in the state, we recorded 1,912 macrofungal specimens collected in Acre. A total of 855 were identified at the species level, corresponding to 279 species distributed in 145 genera and 56 families. The families Polyporaceae, Hypoxylaceae, Xylariaceae and Hymenochaetaceae contribute with about 50% of the identified species. The genera Hypoxylon, Trametes, Xylaria, Ganoderma and Polyporus present the highest species richness, while Hypomontagnella monticulosa, Cerrena caperata, Auricularia delicata, A. fuscosuccinea and Ranadivia modesta are the most abundant species in number of specimens collected. Data analysis allowed us to determine a reliable number that best represents the knowledge of fungi in Acre. However, when considering the estimates of fungal species for the Amazon, these data are insufficient, which demonstrates the need to encourage and invest in more studies on these fungi in the region. [ABSTRACT FROM AUTHOR]
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- 2024
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9. Coriolopsis strumosa as an Orchid Endophytic Fungus and Its Spatial Distribution in Epidendrum sp. (Orchidaceae).
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Yao, Na, Wang, Tao, Jiang, Jingwan, Yang, Yuqian, and Cao, Xiaolu
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ENDOPHYTIC fungi ,WOOD-decaying fungi ,MYCORRHIZAL fungi ,FUNGAL communities ,NUCLEOTIDE sequencing ,PHALAENOPSIS ,ORCHIDS - Abstract
Coriolopsis spp. are wood-decaying fungi that inhabit forests. They are mainly distributed in tropical and subtropical areas. Strain Epi910 was isolated from the asymbiotically germinated protocorm of Epidendrum sp. and identified as Coriolopsis strumosa. Symbiotic germination and high-throughput sequencing of the endophytic fungal communities of different parts were performed to characterize the function and spatial distribution of the Epi910 isolate. Under symbiotic germination, Epi910 promoted seed germination and seedling formation as an endophytic native fungus of Epidendrum sp. Endophytic fungal communities from seven different parts of Epidendrum sp. were characterized. In total, 645 OTUs were identified; 30 OTUs were shared among all seven parts. The internal transcribed spacer sequence of Epi910 was identical to that of a dominant shared OTU (OTU6). The relative abundance of OTU6 in the seven parts was identified as follows: capsule pericarp > seed > root > asymbiotically germinated protocorm > epiphytic root > ovary > rachis. Our results suggest that the isolate belonging to Coriolopsis strumosa could promote the germination of Epidendrum sp. There may, therefore, be endophytic fungi other than common orchid mycorrhizal fungi with the ability to enhance germination in orchids. [ABSTRACT FROM AUTHOR]
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- 2024
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10. Phylogenetic and Taxonomic Analyses Reveal Three New Wood-Inhabiting Fungi (Polyporales, Basidiomycota) in China.
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Yang, Yang, Li, Rong, Jiang, Qianquan, Zhou, Hongmin, Muhammad, Akmal, Wang, Hongjuan, and Zhao, Changlin
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BASIDIOMYCOTA , *FUNGI , *BASIDIOSPORES , *POLYPORACEAE , *BAYESIAN field theory , *WOOD-decaying fungi - Abstract
Three new wood-inhabiting fungal species, Cerioporus yunnanensis, Perenniporiopsis sinensis, and Sarcoporia yunnanensis, are proposed based on a combination of the morphological features and molecular evidence. Cerioporus yunnanensis is characterized by the pileate basidiomata having a fawn brown to black pileal surface, a dimitic hyphal system with clamped generative hyphae, and the presence of the fusoid cystidioles and cylindrical basidiospores (9–12.5 × 3.5–5 µm). Perenniporiopsis sinensis is distinct from the osseous pileus with verrucose, an orange-yellow to dark reddish-brown pileal surface with a cream margin, a trimitic hyphal system with clamped generative hyphae, and the presence of the fusiform cystidioles and ellipsoid basidiospores (9–11 × 5.5–6.5 µm). Sarcoporia yunnanensis is typical of the pileate basidiomata with a salmon to reddish-brown pileal surface, a monomitic hyphal system with clamped generative hyphae, and the presence of the ellipsoid basidiospores (4–5.5 × 2.5–4 µm). Sequences of ITS + nLSU + mt-SSU + TEF1 + RPB1 + RPB2 genes were used for the phylogenetic analyses using maximum likelihood, maximum parsimony, and Bayesian inference methods. The multiple genes with six loci analysis showed that the three new species nested within the order Polyporales, in which C. yunnanensis and P. sinensis nested into the family Polyporaceae, and S. yunnanensis grouped into the family Sarcoporiaceae. [ABSTRACT FROM AUTHOR]
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- 2024
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11. Umbellaceae fam. nov. (Hymenochaetales , Basidiomycota) for Umbellus sinensis gen. et sp. nov. and Three New Combinations.
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Wang, Xue-Wei and Zhou, Li-Wei
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BASIDIOMYCOTA , *SPECIES diversity , *AGARICALES , *POLYPORACEAE , *BASIDIOSPORES - Abstract
Hymenochaetales, belonging to Agaricomycetes, Basidiomycota, comprises most polypores and corticioid fungi and, also, a few agarics. The latest taxonomic framework accepts 14 families in this order. When further exploring species diversity of Hymenochaetales, two corticioid specimens collected from China producing cystidia with large umbrella-shaped crystalline heads attracted our attention. This kind of cystidia was reported only in three unsequenced species, viz. Tubulicrinis corneri, T. hamatus and T. umbraculus, which were accepted in Tubulicrinaceae, Hymenochaetales. The current multilocus-based phylogeny supports that the two Chinese specimens formed an independent lineage from Tubulicrinaceae as well as the additional 13 families and all sampled genera in Hymenochaetales. Therefore, a monotypic family, Umbellaceae, is newly described with the new genus Umbellus as the type genus to represent this lineage. The two Chinese specimens are newly described as U. sinensis, which differs from T. corneri, T. hamatus, and T. umbraculus in a combination of a smooth to grandinioid hymenophoral surface, not flattened, broadly ellipsoid basidiospores with a tiny apiculus, and growth on angiosperm wood. Due to the presence of the unique cystidia, the three species of Tubulicrinis, even though they lack available molecular sequences, are transferred to Umbellus as U. corneri, U. hamatus, and U. umbraculus. Hereafter, all known species with large umbrella-shaped crystalline-headed cystidia are in a single genus. In summary, the current study provides a supplement to the latest taxonomic framework of Hymenochaetales and will help to further explore species diversity and the evolution of this fungal order. [ABSTRACT FROM AUTHOR]
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- 2024
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12. A revised genus-level classification for Cerrenaceae (Polyporales, Agaricomycetes).
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Miettinen, O., Vlasák, J., Larsson, E., Vlasák Jr., J., Seelan, J. S. S., Hernawati, Levicky, Q., Larsson, K.-H., and Spirin, V.
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PATHOGENIC fungi , *POLYPORACEAE , *ROOT rots , *FUNGAL genetics , *MACROFUNGI - Abstract
Cerrenaceae is a small family of polypores and hydnoid fungi in the order Polyporales (Basidiomycota). The family consists of white-rot fungi, some of which are serious tree pathogens. Combining morphological evidence with a phylogenetic dataset of six genetic markers, we revise generic concepts in the family and propose a seven-genus classification system for the family. Two genera are introduced as new: the monotypic Acanthodontia for Radulodon cirrhatinus, and Lividopora for the Rigidoporus vinctus complex. We re-introduce the name Somion for the Spongipellis delectans complex. Other recognized genera in the family are Cerrena, Irpiciporus, Pseudolagarobasidium, and Radulodon. New species introduced are Irpiciporus branchiformis from Tanzania, Lividopora armeniaca, and L. facilis from Southeast Asia, and Somion strenuum from East Asia. We provide nomenclatural comments on all the names combined to the above Cerrenaceae genera and typify Cerrena unicolor, C. zonata, Polyporus carneopallens (= L. vincta), Somion occarium, and S. unicolor. The genus Hyphoradulum belongs to Cystostereaceae (Agaricales), and we transfer the type species H. conspicuum to Crustomyces. Our study highlights the importance of integrating different basidiocarp types in analyses when revising genus classification in macrofungi. [ABSTRACT FROM AUTHOR]
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- 2023
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13. Phylloporia mutabilis sp. nov. from Benin, West Africa.
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Olou, B. A., Krah, F.-S., Piepenbring, M., and Yorou, N. S.
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HYMENOCHAETACEAE , *POLYPORACEAE , *PLANT diversity , *ANGIOSPERMS - Abstract
Phylloporia is a widespread genus of Hymenochaetales (Basidiomycota) with polyporoid basidiomata found mainly in the tropics. Species of Phylloporia are predominantly parasitic of woody plant hosts, while some species grow as saprotrophs. Data on the genus is still scarce for tropical Africa, where we expect a high diversity given the high plant diversity in this area. Two specimens of this genus were collected in Benin (West Africa) and analysed morphologically and phylogenetically based on a multigene dataset (ITS, LSU, EF1a). Strong support for a species new to science was found, described here as Phylloporia mutabilis. It differs from other Phylloporia species by stipitate, coriaceous basidiomata, earth coloured to dark brown when fresh and changing upon drying from golden to yellowish brown, the margin being large in young specimens, becoming narrower with maturity. Basidiomata of Phylloporia mutabilis grow on the soil under angiosperm trees in a dense dry forest, so its lifestyle (saprotrophic, parasitic or mycorrhizal) is not evident, and future ecological studies will be required to elucidate this aspect. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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14. Lanostane triterpenoids from artificially cultivated fruiting bodies of Ganoderma wiiroense.
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Yangchum, Arunrat, Srichomthong, Kitlada, Thummarukcharoen, Tuksaporn, Sommai, Sujinda, and Isaka, Masahiko
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Seven undescribed lanostane triterpenoids (1 – 7) were isolated from artificially cultivated fruiting bodies of Ganoderma wiiroense , strain TBRC-BCC 60613. The structures were elucidated on the basis of NMR spectroscopic and mass spectrometry data. The C-23 absolute configuration of 1 was determined to be 23 S using the modified Mosher's method. The isolated compounds were evaluated for their antitubercular and antimalarial activities. Compound 7 showed activity against Mycobacterium tuberculosis H37Ra (MIC 50 μg/ml). [Display omitted] • Seven undescribed lanostanes were isolated from Ganoderma wiiroense. • The structures were elucidated by spectroscopic methods and chemical correlations. • One of the undescribed lanostanes showed antitubercular activity. [ABSTRACT FROM AUTHOR]
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- 2023
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15. The complete mitochondrial genome of a wood-decaying fungus Vanderbylia fraxinea (Polyporaceae, Polyporales)
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Sung-Eun Cho, Heonil Kang, Dong-Hyeon Lee, Sang-Tae Seo, Namkyu Kim, Sanggon Lee, Misong Kim, and Keumchul Shin
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Perenniporia fraxinea ,Polyporaceae ,wood-decaying fungus ,mitochondrial genome ,Genetics ,QH426-470 - Abstract
AbstractVanderbylia fraxinea (Bull.) D.A. Reid, 1973 is an important wood-inhabiting fungus that plays a significant role in nutrient recycling in most forest ecosystems. In this study, the complete mitochondrial genome of V. fraxinea was characterized through de novo assembly using Illumina sequencing data and genome annotation. The mitochondrial genome is a circular molecule of 115,473 bp with a GC content of 28.66%. It comprises a total of 62 genes. Among these, 36 are protein-coding genes including 21 free-standing open reading frames (ORFs), 24 transfer RNA genes, and two ribosomal RNA genes. Core gene set commonly found in fungal mitochondrial genomes is also present in this genome, such as the apocytochrome b (cob), three subunits of the cytochrome c oxidase (cox1, cox2, and cox3), seven subunits of the NADH dehydrogenase (nad1, nad2, nad3, nad4, nad4L, nad5, and nad6), and three subunits of the ATP synthase (atp6, atp8, and atp9), as well as ribosomal RNA subunits (rns and rnl) and a set of transfer RNA genes. Phylogenetic analysis of the protein-coding sequences from the mitochondrial genome revealed a close relationship between V. fraxinea and the Ganoderma species within the Polyporaceae family.
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- 2023
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16. Nutritional Composition, Antioxidant Activity, Cytotoxicity, and Enzymatic Potential of Ficus nitida -Associated Tomophagus colossus.
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Al-Bedak, Osama Abdel-Hafeez Mohamed, Moharram, Ahmed Mohamed, Abdel-Raheam, Hossam El-Dean Farghaly, Stephenson, Steven L., and Ameen, Fuad
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CYTOTOXINS , *WHEAT bran , *ANALYTICAL chemistry , *FAVA bean , *FRUITING bodies (Fungi) , *SUGARCANE , *RICE hulls , *WHEAT straw - Abstract
A fruiting body of a basidiomycete fungus was discovered growing on chopped Ficus nitida tree trunks in the student housing on the Assiut University campus during the course of this inquiry and a normal collecting operation in the Assiut Governorate, Egypt. Following the growth of the basidioma's inner tissue on PDA, fungal mycelial growth was achieved. Internal transcribed spacer region (ITS) sequencing has allowed for the identification of the fungus as Tomophagus colossus. On the dry weight basis, chemical analysis of T. colossus AUMC 14536 basidioma revealed that it contains 28.81% carbohydrates, 25.34% crude fats, 23.44% crude fibers, 20.64% crude proteins, and 3.02% ash, in addition to potassium, phosphorus, calcium, selenium, iron, and zinc (133.59, 114.46, 6.27, 3.08, 1.28, and 0.73 mg/100 g dry weight, respectively). The total phenolic compounds (39.26 mg/g) and total flavonoids (5.62 mg/g) were also evaluated. The basidioma extract's antioxidant activity was assessed as %DPPH radical scavenging activity with an IC50 of 4.15 µg/mL compared with a 1.89 µg/mL IC50 of ascorbic acid. In solid-state fermentation (SSF), the fungus could ferment broad bean straw, palm leaf hay, rice husk, rice straw, sugarcane bagasse, and wheat bran to produce endoglucanase, exoglucanase, laccase, pectinase, and xylanase in substantial amounts. Specific activity exhibited the highest values for endoglucanase (81.48 U/mg), exoglucanase (114.35 U/mg), pectinase (81.94 U/mg), and xylanase (70.18 U/mg) on the rice husk, while the peak of laccase activity (94.27 U/mg) was gained on bean straw. This is the first assessment of the organism's nutritional value, amino acid content, antioxidant activity, and enzymatic capabilities in Egypt. [ABSTRACT FROM AUTHOR]
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- 2023
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17. Fungal Diversity and Distribution in the Biodiversity Hotspots of the Western Himalayas.
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Yadav, Neelesh, Rakholia, Shrey, Ali, Naseem, and Yosef, Reuven
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BIODIVERSITY , *SPECIES diversity , *SOLAR radiation , *SPECIES distribution , *POLYPORACEAE , *RHODODENDRONS - Abstract
The western Himalayan region is a biodiversity hotspot. Although much of the flora and fauna has been documented, there are very few studies on fungal diversity. We present the statistical analyses of the sample collections from the last 150 years of data in the fungarium of the Forest Research Institute. We found that the host tree species—pine, oak, deodar, and spruce, had very high Shannon diversity (SD) and species richness (SR), while Dalbergia and Rhododendron had moderate to low SD and SR values; although sal occurs at lower altitudes, it has high SD and SR values. Among fungal families, the highest SD and SR value was found in Polyporaceae. Hymenochaetaceae, Peniophoraceae, Coleosporiaceae, and Stereaceae also showed SD with moderate SR. Fomitopsidaceae, Cronartiaceae, Ganodermataceae, and Thelephoraceae have low biodiversity and species. Thelephoraceae are distributed above 2000 m altitude, and Ganodermataceae and Hymenochaetaceae have wider distribution ranges, namely, 0–3500 m and 0–5000 m, respectively. The Polyporaceae show diverse variations in species distribution and occur between 0 and 4500 m; Coleosporiaceae and Cronartiaceae around 2000 m; Stereaceae, Meruliaceae, Peniophoraceae, and Fomitopsidaceae occur between 1700 and 1800 m, with all Stereaceae and Fomitopsidaceae having different distribution ranges of up to 5000 m. We found that areas with relatively low rainfall had lower species richness, and vice versa, and that high solar radiation negatively affected fungal density and SR, as observed in the distribution of Thelephoraceae. While families with high SD and SR values such as Polyporaceae were found under relatively high rainfall, moderate solar radiation, and high temperatures. Similar studies need to be undertaken in other parts of the Himalayas and the importance of fungi in ethnobotany needs to be understood to ensure sustainable use. [ABSTRACT FROM AUTHOR]
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- 2023
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18. 六盘山国家级自然保护区大型真菌多样性.
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李敏奇, 闫兴富, 任玉锋, 周立彪, and 邓晓娟
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MOLECULAR biology ,SPECIES diversity ,NATIONAL parks & reserves ,NATURE reserves ,POLYPORACEAE - Abstract
Copyright of Mycosystema is the property of Mycosystema Editorial Board and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
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- 2023
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19. A contribution to Porogramme (Polyporaceae, Agaricomycetes) and related genera
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Wei-Lin Mao, Ying-Da Wu, Hong-Gao Liu, Yuan Yuan, and Yu-Cheng Dai
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Polyporaceae ,Phylogeny ,Taxonomy ,Wood-rotting fungi ,Five new taxa ,Botany ,QK1-989 - Abstract
Abstract The polypores with shallow pores from tropical Asia and America are studied. Our molecular phylogeny based on the internal transcribed spacer (ITS), the large subunit nuclear ribosomal RNA gene (nLSU), the translation elongation factor 1-α gene (TEF1), and the largest subunit of RNA polymerase II (RPB1) demonstrates six clades are formed among Porogramme and related genera. Two new genera, Cyanoporus and Pseudogrammothele, are established, and the six clades represent Porogramme , Cyanoporus , Grammothele, Epithele, Theleporus, and Pseudogrammothele, respectively. The molecular clock analyses estimate the divergence times of the six clades based on a dataset (ITS + LSU + TEF1 + RPB1 + RPB2), and we recognize the mean stem ages of the six genera are earlier than 50 Mya. Three new species in Porogramme were morphologically and phylogenetically confirmed, and they are described as P. austroasiana, P. cylindrica, and P. yunnanensis. Phylogenetic analysis shows that type species of Tinctoporellus and Porogramme are nested in the same clade, and Tinctoporellus is treated as a synonym of Porogramme. Based on our phylogeny, twelve new combinations are proposed, and the differences between the new species and similar or related species are discussed.
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- 2023
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20. Coriolopsis strumosa as an Orchid Endophytic Fungus and Its Spatial Distribution in Epidendrum sp. (Orchidaceae)
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Na Yao, Tao Wang, Jingwan Jiang, Yuqian Yang, and Xiaolu Cao
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plant endophytes ,symbiosis ,Polyporaceae ,germination ,Biology (General) ,QH301-705.5 - Abstract
Coriolopsis spp. are wood-decaying fungi that inhabit forests. They are mainly distributed in tropical and subtropical areas. Strain Epi910 was isolated from the asymbiotically germinated protocorm of Epidendrum sp. and identified as Coriolopsis strumosa. Symbiotic germination and high-throughput sequencing of the endophytic fungal communities of different parts were performed to characterize the function and spatial distribution of the Epi910 isolate. Under symbiotic germination, Epi910 promoted seed germination and seedling formation as an endophytic native fungus of Epidendrum sp. Endophytic fungal communities from seven different parts of Epidendrum sp. were characterized. In total, 645 OTUs were identified; 30 OTUs were shared among all seven parts. The internal transcribed spacer sequence of Epi910 was identical to that of a dominant shared OTU (OTU6). The relative abundance of OTU6 in the seven parts was identified as follows: capsule pericarp > seed > root > asymbiotically germinated protocorm > epiphytic root > ovary > rachis. Our results suggest that the isolate belonging to Coriolopsis strumosa could promote the germination of Epidendrum sp. There may, therefore, be endophytic fungi other than common orchid mycorrhizal fungi with the ability to enhance germination in orchids.
- Published
- 2024
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21. Status of macrofungal diversity in the wet evergreen forests of Agasthyamala Biosphere Reserve, Western Ghats, India.
- Author
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Akshaya, Kurunnan Kandy, Karthikeyan, Arumugam, and Kunhikannan, Cheravengat
- Subjects
BIOSPHERE reserves ,EVERGREENS ,POLYPORACEAE ,SPECIES diversity ,MACROFUNGI ,ECOSYSTEMS ,BIODIVERSITY ,MYCORRHIZAL fungi - Abstract
Agasthyamala Biosphere Reserve is a part of Western Ghats (India), has diverse ecosystems and constitutes an important biogeographical 'hotspot' which is well known for its species richness and endemism. Since limited information was available on the mycoflora in this area, a survey was conducted to evaluate the macrofungal diversity in the wet evergreen forests of the Agasthyamala Biosphere Reserve. The survey was carried out during the monsoon and post-monsoon seasons of 2021-2022 and revealed the existence of 62 macrofungal species belonging to 43 genera, 24 families, and eight orders. Out of the eight orders, seven orders belong to the division Basidiomycota and the other order Xylariales belongs to Ascomycota. The family Polyporaceae was identified as the dominant family. The survey also noted the presence of saprotrophic and mycorrhizal fungi. Among the identified species, the maximum density was of Panellus pusillus (6.08) followed by Microporus xanthopus (5.38). Microporus xanthopus (82.14%) exhibited the maximum frequency of occurrence and was identified as the most common species. Coprinellus disseminatus was the most abundant species among macrofungi. The assessment of macrofungal diversity using the Shannon biodiversity index resulted in a value of 2.99, indicating a rich and diverse fungal population within the forest. This finding emphasizes the significant role of the forest ecosystem in supporting a wide variety of fungi. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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22. Global phylogeographical distribution of Gloeoporus dichrous.
- Author
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Cho, Yoonhee, Seo, Chang Wan, Jung, Paul Eunil, and Lim, Young Woon
- Subjects
- *
WOOD-decaying fungi , *HAPLOTYPES , *AMERICANS , *POLYPORACEAE , *BIOGEOGRAPHY , *MOLECULAR clock - Abstract
Phylogeographic analyses are efficient in ecological and evolutionary studies to discover the origin of a lineage, its dispersal routes, and the divergence of ancestral traits. Studies on widespread wood-decay fungi have revealed the phylogenetic division of several polypores based on geographical distribution. In this study, specimens of Gloeoporus dichrous, a cosmopolitan polypore species, were collected globally and analyzed for their geographic distribution. Multi-marker Bayesian molecular clock and haplotype analyses revealed a clear division of G. dichrous populations by continent. The species diverged from its neighboring clades 10.3 (16.0–5.6) million years ago, with Asian and North American populations at the center of divergence. Possible dispersal mechanisms and pathways are predicted and discussed based on the evaluated transfer routes. The biogeography of G. dichrous analyzed in this study represents a fraction of the polypore evolution and may advance the understanding of the overall evolution of wood-decay fungi. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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23. New records and barcode sequence data of wood-inhabiting polypores in Benin with notes on their phylogenetic placements and distribution.
- Author
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Olou, B. A., Langer, E., Ryvarden, L., Krah, F.-S., Hounwanou, G. B., Piepenbring, M., and Yorou, N. S.
- Subjects
- *
POLYPORACEAE , *FUNGAL phylogeny , *FUNGAL morphology , *TAXONOMY , *FOREST management - Abstract
Wood-inhabiting fungi (WIF), such as polypores, are extremely species-rich and play vital roles in the functioning of forest ecosystems as decomposers. Despite the importance of polypores, our knowledge of the diversity and distribution of these fungi is still poor in general and especially for West Africa. To advance our knowledge we here summarise results from field collections between 2017 and 2021 and present (i) a taxonomic overview, (ii) phylogenetic placements and (iii) an illustrated catalogue of wood-inhabiting polypore fungi with colour pictures. During the field sampling campaigns, we collected 647 specimens. Based on morphological characteristics and molecular barcode data, 76 polypore species belonging to six orders, 15 families and 39 genera were identified. Of the 76 species, 30 are new to the West Africa, 69 new to Benin, and two new combinations Fuscoporia beninensis and Megasporia minuta are proposed. With this summary, we provide new data for further research. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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24. Mixtures of aromatic compounds induce ligninolytic gene expression in the wood-rotting fungus Dichomitus squalens
- Author
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Daly, Paul, Peng, Mao, Casado López, Sara, Lipzen, Anna, Ng, Vivian, Singan, Vasanth R, Wang, Mei, Grigoriev, Igor V, de Vries, Ronald P, and Mäkelä, Miia R
- Subjects
Agricultural ,Veterinary and Food Sciences ,Biomedical and Clinical Sciences ,Creative Arts and Writing ,Medical Biotechnology ,Art History ,Theory and Criticism ,Agricultural Biotechnology ,Fungal Proteins ,Gene Expression Profiling ,Gene Expression Regulation ,Developmental ,Gene Expression Regulation ,Fungal ,Hydrocarbons ,Aromatic ,Laccase ,Lignin ,Peroxidases ,Polyporaceae ,Wood ,Basidiomycete ,Aromatics ,Gene expression ,White-rot ,Biological Sciences ,Engineering ,Technology ,Biotechnology ,Agricultural biotechnology ,Medical biotechnology ,Art history ,theory and criticism - Abstract
Heterologous production of fungal ligninolytic cocktails is challenging due to the low yields of catalytically active lignin modifying peroxidases. Production using a natural system, such as a wood-rotting fungus, is a promising alternative if specific or preferential induction of the ligninolytic activities could be achieved. Using transcriptomics, gene expression of the white-rot Dichomitus squalens during growth on mixtures of aromatic compounds, with ring structures representing the two major lignin sub-units, was compared to a wood substrate. Most of the genes encoding lignin modifying enzymes (laccases and peroxidases) categorised as highly or moderately expressed on wood were expressed similarly on aromatic compounds. Higher expression levels of a subset of manganese and versatile peroxidases was observed on di- compared to mono-methoxylated aromatics. The expression of polysaccharide degrading enzymes was lower on aromatic compounds compared to wood, demonstrating that the induction of lignin modifying enzymes became more specific. This study suggests potential for aromatic waste streams, e.g. from lignocellulose pretreatment, to produce a lignin-specific enzyme cocktail from D. squalens or other white-rot fungi.
- Published
- 2020
25. Glucose-Mediated Repression of Plant Biomass Utilization in the White-Rot Fungus Dichomitus squalens
- Author
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Daly, Paul, Peng, Mao, Di Falco, Marcos, Lipzen, Anna, Wang, Mei, Ng, Vivian, Grigoriev, Igor V, Tsang, Adrian, Mäkelä, Miia R, and de Vries, Ronald P
- Subjects
Biological Sciences ,Industrial Biotechnology ,Catabolite Repression ,Glucose ,Polyporaceae ,Wood ,Dichomitus ,carbon catabolite repression ,CAZymes ,regulation ,Microbiology ,Medical microbiology - Abstract
The extent of carbon catabolite repression (CCR) at a global level is unknown in wood-rotting fungi, which are critical to the carbon cycle and are a source of biotechnological enzymes. CCR occurs in the presence of sufficient concentrations of easily metabolizable carbon sources (e.g., glucose) and involves downregulation of the expression of genes encoding enzymes involved in the breakdown of complex carbon sources. We investigated this phenomenon in the white-rot fungus Dichomitus squalens using transcriptomics and exoproteomics. In D. squalens cultures, approximately 7% of genes were repressed in the presence of glucose compared to Avicel or xylan alone. The glucose-repressed genes included the essential components for utilization of plant biomass-carbohydrate-active enzyme (CAZyme) and carbon catabolic genes. The majority of polysaccharide-degrading CAZyme genes were repressed and included activities toward all major carbohydrate polymers present in plant cell walls, while repression of ligninolytic genes also occurred. The transcriptome-level repression of the CAZyme genes observed on the Avicel cultures was strongly supported by exoproteomics. Protease-encoding genes were generally not glucose repressed, indicating their likely dominant role in scavenging for nitrogen rather than carbon. The extent of CCR is surprising, given that D. squalens rarely experiences high free sugar concentrations in its woody environment, and it indicates that biotechnological use of D. squalens for modification of plant biomass would benefit from derepressed or constitutively CAZyme-expressing strains.IMPORTANCE White-rot fungi are critical to the carbon cycle because they can mineralize all wood components using enzymes that also have biotechnological potential. The occurrence of carbon catabolite repression (CCR) in white-rot fungi is poorly understood. Previously, CCR in wood-rotting fungi has only been demonstrated for a small number of genes. We demonstrated widespread glucose-mediated CCR of plant biomass utilization in the white-rot fungus Dichomitus squalens This indicates that the CCR mechanism has been largely retained even though wood-rotting fungi rarely experience commonly considered CCR conditions in their woody environment. The general lack of repression of genes encoding proteases along with the reduction in secreted CAZymes during CCR suggested that the retention of CCR may be connected with the need to conserve nitrogen use during growth on nitrogen-scarce wood. The widespread repression indicates that derepressed strains could be beneficial for enzyme production.
- Published
- 2019
26. Transcriptome analysis reveals insight into the protective effect of N-acetylcysteine against cadmium toxicity in Ganoderma lucidum (Polyporales: Polyporaceae).
- Author
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Jin, Xin, Wu, Peng, Li, Ping, Xiong, Chuan, Gui, Mingying, and Huang, Wenli
- Subjects
GANODERMA lucidum ,CADMIUM poisoning ,HEAVY metal toxicology ,POLYPORACEAE ,ATP-binding cassette transporters ,CHINESE medicine ,CADMIUM - Abstract
Ganoderma lucidum is widely cultivated and used as traditional medicine in China and other Asian countries. As a member of macrofungi, Ganoderma lucidum is also prone to bioaccumulation of cadmium and other heavy metals in a polluted environment, which affects the growth and production of Ganoderma lucidum, as well as human health. N-Acetyl-l-cysteine (NAC) is considered a general antioxidant and free radical scavenger that is involved in the regulation of various stress responses in plants and animals. However, whether NAC could regulate cadmium stress responses in macrofungi, particularly edible fungi, is still unknown. In this work, we found that the exogenous NAC could alleviate Cd-induced growth inhibition and reduce the cadmium accumulation in Ganoderma lucidum. The application of the NAC cloud also inhibit cadmium-induced H
2 O2 production in the mycelia. By using transcriptome analysis, 2920 and 1046 differentially expressed unigenes were identified in "Cd100 vs CK" and "NAC_Cd100 vs Cd100," respectively. These differential unigenes were classified into a set of functional categories and pathways, which indicated that various biological pathways may play critical roles in the protective effect of NAC against Cd‑induced toxicity in Ganoderma lucidum. Furthermore, it suggested that the ATP-binding cassette transporter, ZIP transporter, heat shock protein, glutathione transferases, and Cytochrome P450 genes contributed to the increased tolerance to cadmium stress after NAC application in Ganoderma lucidum. These results provide new insight into the physiological and molecular response of Ganoderma lucidum to cadmium stress and the protective role of NAC against cadmium toxicity. [ABSTRACT FROM AUTHOR]- Published
- 2023
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27. Diversity of bracket fungi (Basidiomycota: Agaricomycetes: Polyporaceae) in Jammu Division, Jammu & Kashmir, India.
- Author
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Bala, Brij
- Subjects
POLYPORACEAE ,BASIDIOMYCOTA ,FUNGI ,BROWN rot ,CAENORHABDITIS elegans - Abstract
The 24 taxa comprising of 13 genera belonging to Polyporaceae (Basidiomycota, Agaricomycetes) are described and illustrated on the basis of basidiome collected during the rainy season in the years from 2014-2019 in Doda, Jammu, Kathua, Kishtwar, Ramban, and Udhampur districts of Jammu division of the Union Territory of Jammu & Kashmir. Of these, five (Dichomitus campestris, Perenniporia adnata, Pilatoporus bondartsevae, Polyporus efibulatus, and Tyromyces amazonicus) are new records for India, 14 (Abortiporus biennis, Cerrena zonata, Favolus glaber, Fuscopostia leucomallella, Hexagonia nitida, Lenzites elegans, Lenzites warnieri, Perreniporia fraxniea, P. ochroleuca, Poriella subacida, Polyporus alveolaris, Pycnoporus sanguineus, Tyromyces chioneus, and Trichaptum biforme), are new records for the Union territory of Jammu & Kashmir, two (Pycnoporus cinnabarinus and Polyporus squamosus), and the remaining three (Fomes fomentarius, Lenzites betulina, and Trichaptum abietinum) are re-recorded from the study area. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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28. A contribution to Porogramme (Polyporaceae, Agaricomycetes) and related genera.
- Author
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Mao, Wei-Lin, Wu, Ying-Da, Liu, Hong-Gao, Yuan, Yuan, and Dai, Yu-Cheng
- Subjects
- *
RNA polymerase II , *POLYPORACEAE , *MOLECULAR phylogeny , *MOLECULAR clock , *RIBOSOMAL DNA , *RIBOSOMAL RNA , *RNA polymerases - Abstract
The polypores with shallow pores from tropical Asia and America are studied. Our molecular phylogeny based on the internal transcribed spacer (ITS), the large subunit nuclear ribosomal RNA gene (nLSU), the translation elongation factor 1-α gene (TEF1), and the largest subunit of RNA polymerase II (RPB1) demonstrates six clades are formed among Porogramme and related genera. Two new genera, Cyanoporus and Pseudogrammothele, are established, and the six clades represent Porogramme, Cyanoporus, Grammothele, Epithele, Theleporus, and Pseudogrammothele, respectively. The molecular clock analyses estimate the divergence times of the six clades based on a dataset (ITS + LSU + TEF1 + RPB1 + RPB2), and we recognize the mean stem ages of the six genera are earlier than 50 Mya. Three new species in Porogramme were morphologically and phylogenetically confirmed, and they are described as P. austroasiana, P. cylindrica, and P. yunnanensis. Phylogenetic analysis shows that type species of Tinctoporellus and Porogramme are nested in the same clade, and Tinctoporellus is treated as a synonym of Porogramme. Based on our phylogeny, twelve new combinations are proposed, and the differences between the new species and similar or related species are discussed. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
29. 云南省文山地区木腐菌真菌资源多样性研究.
- Author
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董军红, 顾金莹, and 赵长林
- Subjects
WOOD-decaying fungi ,FIELD research ,LINEAR orderings ,BAYESIAN field theory ,POLYPORACEAE ,PARSIMONIOUS models - Abstract
Copyright of Mycosystema is the property of Mycosystema Editorial Board and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
- Published
- 2023
- Full Text
- View/download PDF
30. An Updated Phylogenetic Assessment and Taxonomic Revision of Perenniporia sensu lato (Polyporales, Basidiomycota).
- Author
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Ji, Xing, Sun, Yi-Fei, Wu, Dong-Mei, Gao, Neng, and Cui, Bao-Kai
- Subjects
- *
BASIDIOMYCOTA , *RIBOSOMAL RNA , *PHYLOGENY , *MOLECULAR phylogeny , *DNA sequencing , *POLYPORACEAE - Abstract
Perenniporia is an important genus of Polyporaceae. In its common acceptation, however, the genus is polyphyletic. In this study, phylogenetic analyses on a set of Perenniporia species and related genera were carried out using DNA sequences of multiple loci, including the internal transcribed spacer (ITS) regions, the large subunit nuclear ribosomal RNA gene (nLSU), the small subunit mitochondrial rRNA gene (mtSSU), the translation elongation factor 1-α gene (TEF1) and the b-tubulin gene (TBB1). Based on morphology and phylogeny, 15 new genera, viz., Aurantioporia, Citrinoporia, Cystidioporia, Dendroporia, Luteoperenniporia, Macroporia, Macrosporia, Minoporus, Neoporia, Niveoporia, Rhizoperenniporia, Tropicoporia, Truncatoporia, Vanderbyliella, and Xanthoperenniporia, are proposed; 2 new species, Luteoperenniporia australiensis and Niveoporia subrusseimarginata, are described; and 37 new combinations are proposed. Illustrated descriptions of the new species are provided. Identification keys to Perenniporia and its related genera and keys to the species of these genera are provided. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
31. 东北地区蒙古栎木生大型真菌物种多样性和区系 特征.
- Author
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孙渤洋, 武英达, and 员瑗
- Subjects
SECONDARY forests ,MACROFUNGI ,POLYPORACEAE ,OAK ,SPECIES - Abstract
Copyright of Mycosystema is the property of Mycosystema Editorial Board and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
- Published
- 2023
- Full Text
- View/download PDF
32. Macrofungi in Some Areas of Borail Reserve Forest of Dima Hasao District, Assam.
- Author
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Jarambusa, Mairingdi and Baruah, Pradip Kumar
- Subjects
FOREST reserves ,MACROFUNGI ,ECOSYSTEM dynamics ,TROPICAL climate ,POLYPORACEAE ,ECOSYSTEMS - Abstract
Macrofungi are ecologically resourceful group of organisms exists in every possible ecosystem. Borail Reserve Forest of Dima Hasao district, Assam is endowed with typical Sub tropical monsoon climate which provide adequate habitat for the growth and development of various types of vegetation as well as diverse species of macrofungi. The study attempts to assess the macrofungal diversity in certain areas of Borail Reserve Forest as it is yet to explore. The investigation was conducted in the year 2021 (June-December). Sampling was done using quadrat method each measuring 100×100m2. During the survey, a total of 21 species belonging to 15 families were encountered and identified up to species level i.e. Auriculariaceae, Clavulinaceae, Psathyrellaceae, Fomitopsidaceae, Ganodermataceae, Agaricaceae, Lyophyllaceae, Marasmiaceae, Polyporaceae, Phallaceae, Pluteaceae, Schizophyllaceae, Stereaceae, Tremellaceae and Xylariaceae. It is found that 20 species belong to basidiomycota group and only 1 species belongs to ascomycota group. However, Marasmiaceae and Polyporaceae family are found to be the most dominant family of macrofungi in the region. The inference of the study revealed the diverse treasure of macrofungi of Borail Reserve Forest. The record of macrofungi of the study gives the baseline information for the biological diversity. The significance of macrofungi is not only to balance the ecosystem dynamics but also in human diet and beneficial impact to health, which increases the need for the conservation of this valuable resource. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
33. Lithium bioaccumulation in Lentinus crinitus mycelia grown in media with different lithium sources and pH values.
- Author
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Faria, Maria Graciela Iecher, Avelino, Katielle Vieira, Philadelpho, Biane Oliveira, dos Santos Bomfim, Rafaela, do Valle, Juliana Silveira, Júnior, Affonso Celso Gonçalves, Dragunski, Douglas Cardoso, de Souza Ferreira, Ederlan, de Souza, Carolina Oliveira, Ribeiro, Camila Duarte Ferreira, Colauto, Nelson Barros, and Linde, Giani Andrea
- Subjects
LITHIUM ,LITHIUM carbonate ,BIOACCUMULATION ,BIOMASS production ,MOOD stabilizers ,MYCELIUM ,PLANT growing media - Abstract
Lentinus crinitus bioaccumulates lithium in mycelia, but bioaccumulation may be affected by pH of the culture medium. Lithium is used in clinical practice as a mood stabilizer and antidepressant. This study aimed to assess the effect of culture medium pH and lithium source (LiCl or Li
2 CO3 ) on lithium bioaccumulation in vegetative mycelia of L. crinitus grown in malt extract broth. Lentinus crinitus U9-1 was cultured in malt extract broth supplemented with Li2 CO3 or LiCl (50 mg L−1 lithium) in the pH range of 3.0 to 6.0. The pH was adjusted using HCl solution. The results showed that medium pH affected mycelial biomass production, lithium bioaccumulation in mycelial biomass, and lithium transfer from the culture medium to mycelial biomass. The effect of lithium source on the bioaccumulation capacity of mycelial biomass varied according to pH. At pH 4.0, both lithium sources stimulated mycelial biomass production compared to the control without the addition of lithium. At pH 5.5, Li2 CO3 provided the highest lithium bioaccumulation in mycelial biomass. Lithium transfer from the culture medium to mycelia was highest in Li2 CO3 -supplemented cultures at pH 4.5. LiCl reduced hyphal width compared with Li2 CO3 and the control. However, pH and lithium sources did not affect the formation of clamp connections in hyphae. For the first time, the influence of the pH of the culture medium on lithium bioaccumulation by Lentinus crinitus is reported. Finally, we conclude that the culture medium pH affected lithium transfer and bioaccumulation in mycelial biomass differently depending on the lithium source. Additionally, we report the presence of clamp connections in the hyphae of L. crinitus as an indicator of even growth. [ABSTRACT FROM AUTHOR]- Published
- 2022
- Full Text
- View/download PDF
34. AN APPROACH TO THE BIOGEOGRAPHY OF POLYPORE FUNGI (AGARICOMYCOTINA, BASIDIOMYCOTA) IN SOUTHERN SOUTH AMERICA.
- Author
-
Rajchenberg, Mario
- Subjects
- *
BASIDIOMYCOTA , *POLYPORACEAE , *BIOGEOGRAPHY , *POINT processes , *FUNGI , *PHYLOGENY , *GENETIC speciation - Abstract
The polyporoid fungi from the Patagonian Andes forests of Argentina and Chile were analyzed from a biogeographic point of view through the optics of phylogenetic studies. A total of 72 species are accepted, including 4 that are still unpublished. Species were distributed as either Cosmopolitan (14 spp.), Antitropical (7 spp.), Pantropical + Austral-antarctic (3 spp.), Neotropical (4 spp.), Southtemperate (= endemic, 28 spp.), Austral-antarctic (14 spp.) or Circum-austral (2 spp.) in distribution. They were recorded in the Valdivian province (71 spp.), but also in the Magellanic province (22 spp.) and the Maule province (21 spp.). Three species were also distributed northward in Chile and other 8 species were also found in Juan Fernández province. Almost 35% of the species are brown woodrotting taxa, representing a relatively high percentage in the polypore funga of Patagonia as compared with other world regions; they are mostly associated with Nothofagaceae, not conifers as in the North Hemisphere. Nothophellinus proved to be the single endemic genus, Neophellinus is shown to be a sub-Amazonian genus, and Arambarria an austral genus with representatives in southern South America (south of the Tropic of Capricorn) and the Cape floristic region. For each species, a detailed account of the phylogeny is presented according to the literature, along with insights into its geographical distribution and relationships with other taxa in the genus where it is accepted. Austral lineages are highlighted at genus level (Gloeoporellus, Macrohyporia, Neolentiporus, Ryvardenia; incl. 5 species) and species level (another 12 taxa). Ongoing and completed speciation processes are pointed out. The following new combinations are proposed: Cyanosporus venatus, Neophellinus livescens and Postia exigua. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
35. Ganoaustralins A and B, Unusual Aromatic Triterpenes from the Mushroom Ganoderma australe.
- Author
-
Zhou, Lin, Chen, He-Ping, Li, Xinyang, and Liu, Ji-Kai
- Subjects
- *
GANODERMA , *FRUITING bodies (Fungi) , *MUSHROOMS , *METHYL formate , *TRITERPENES , *PHENYLGLYCINE - Abstract
Two triterpenes, ganoaustralins A (1) and B (2), featuring unprecedented 6/6/6/5/6 scaffolds were isolated from the fruiting bodies of the mushroom Ganoderma australe. The structures were determined by extensive NMR and HRESIMS spectroscopic analysis. The absolute configuration of the C-25 in ganoaustralin A was assigned by the phenylglycine methyl ester (PGME) method. The relative and absolute configurations of the polycyclic backbones were determined by NMR and ECD calculations, respectively. The plausible biosynthetic pathways of ganoaustralins A and B were proposed. Ganoaustralin B showed weak inhibition against β-secretase 1. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
36. Chemical Profiles and Bioactivities of Ethanol and Water Extracts of Sclerotium and Fruiting Body of Lignosus rhinocerotis (Cooke) from Banggai Islands, Indonesia.
- Author
-
Timotius, Kris H., Santoso, Adit W., and Simamora, Adelina
- Subjects
ETHANOL ,SCLEROTIUM (Genus) ,ANTIOXIDANTS ,POLYPORACEAE - Abstract
Lignosus rhinocerotis (tiger milk mushroom), a sclerotium-forming mushroom, has been shown to have various pharmacological properties. However, its chemical constituents were not much investigated. In addition, its enzymes' inhibitory potentials are not yet described. Hence, the study aimed to investigate the chemical compositions of its sclerotium and fruiting body. The UPLC-QTOF-MS/MS was used to analyze ethanol and water extracts of both sclerotium and fruiting bodies. The ethanol extracts of the sclerotium and fruiting body were investigated for their antioxidant (DPPH and phosphomolybdenum) and enzymes (a-glucosidase, xanthine oxidase, and trypsin) inhibitory activities. The UPLC-QTOF-MS/MS analyses showed the presence of adenosine, chelidimerine, and pingpeimine B in the water extracts of the sclerotium and the fruiting body. Whereas cytidine, feroxin A, hirsuteine, mangiferin, neomangiferin and sophoraisoflavone A were identified in ethanol extracts of the sclerotium and the fruiting body. The fruiting body showed higher phenolic content than the sclerotium. The fruiting body also exhibited relatively higher radical scavenging and reducing activities, as well as a-glucosidase inhibition activities, when compared with the sclerotium. However, both the sclerotium and the fruiting body showed slight xanthine oxidase (compared to allopurinol) and trypsin inhibition activities. Findings provide a basis for further exploration of phytotherapeutic applications of L. rhinocerotis. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
37. (3045) Proposal to conserve the name Fomitopsis against Daedalea and Caloporus (Basidiomycota: Polyporales: Fomitopsidaceae).
- Author
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Spirin, Viacheslav, Vlasák, Josef, Malysheva, Vera, Barrett, Matthew, Viner, Ilya, Ryvarden, Leif, Niemelä, Tuomo, Larsson, Karl‐Henrik, and Miettinen, Otto
- Subjects
ENDANGERED species ,PERSONAL names ,KARST ,POLYPORACEAE ,METHAMPHETAMINE - Published
- 2024
- Full Text
- View/download PDF
38. Purification and Identification of Chemical Constituents of Basidiomycete Daedaleopsis tricolor Collected from Mazandaran Province, Iran
- Author
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Atefeh Arab Firozjae, Mohammad Azadbakht, and Emran Habibi
- Subjects
daedaleopsis tricolor ,polyporaceae ,phytochemistry ,Medicine ,Medicine (General) ,R5-920 - Abstract
Background and purpose: Mushrooms are natural sources that have antitumoral effects, immunomodulatory and anti-oxidant effects. One of the fungus which remained intact is Daedaleopsis tricolor that belongs to the family of Polyporaceae. There are limited phytochemical investigations on other species of this genus, so, we aimed at performing a phytochemical analysis of this fungus. Materials and methods: Fungal components were extracted by hexane using maceration method. Then, the extract was concentrated under reduced pressure using a rotary evaporator. The concentration extract was subjected to silica gel column chromatography through mobile phases consisting of hexane: ethyl acetate. Three fractions of hexane purified extract were called F3, F2, and F1. They were analyzed by 1H-NMR and 13C-NMR Spectroscopy and DEPT 90 and DEPT 135 experiments. Results: After analysis and receiving the spectrum results and comparing them with other studies, we identified ergosterol derived compounds, ergosterol peroxide, ergosta-7, 22-dien-3β-ol, and linoleic acid. Conclusion: The three compounds, including ergosterol peroxide, ergosta-7, 22-dien-3β-ol, and linoleic acid were reported for the first time in this fungus.
- Published
- 2022
39. Two new species of Haploporus (Polyporales, Basidiomycota) from China and Ecuador based on morphology and phylogeny
- Author
-
Xiao-Wu Man, Yu-Cheng Dai, Lu-Sen Bian, Meng Zhou, Heng Zhao, and Josef Vlasák
- Subjects
polyporaceae ,wood-rotting fungi ,taxonomy ,fungi diversity ,new taxa ,Microbiology ,QR1-502 - Abstract
At present, 25 species are accepted in Haploporus and are distributed in Asia, Europe, North America, South America, Australia, and Africa. In this study, two new species, Haploporus ecuadorensis from Ecuador and H. monomitica from China, are described and illustrated based on morphological examination and phylogenetic analyses. H. ecuadorensis is characterized by annual, resupinate basidiomata with pinkish buff to honey yellow hymenophore when dry, round to angular pores of 2–4 per mm, a dimitic hyphal structure with generative hyphae bearing clamp connections, hyphae at dissepiment edge usually with one or two simple septa, the presence of dendrohyphidia and cystidioles, and oblong to ellipsoid basidiospores measuring 14.9–17.9 × 6.9–8.8 µm. Haploporus monomitica differs from other Haploporus species in that it has a monomitic hyphal system and strongly dextrinoid basidiospores. The differences between the new species and morphologically similar and phylogenetically related species are discussed. In addition, an updated key to 27 species of Haploporus is provided.
- Published
- 2023
- Full Text
- View/download PDF
40. Dichomitus squalens partially tailors its molecular responses to the composition of solid wood
- Author
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Daly, Paul, López, Sara Casado, Peng, Mao, Lancefield, Christopher S, Purvine, Samuel O, Kim, Young‐Mo, Zink, Erika M, Dohnalkova, Alice, Singan, Vasanth R, Lipzen, Anna, Dilworth, David, Wang, Mei, Ng, Vivian, Robinson, Errol, Orr, Galya, Baker, Scott E, Bruijnincx, Pieter CA, Hildén, Kristiina S, Grigoriev, Igor V, Mäkelä, Miia R, and de Vries, Ronald P
- Subjects
Plant Biology ,Biological Sciences ,Basidiomycota ,Betula ,Fungal Proteins ,Laccase ,Lignin ,Mannans ,Peroxidases ,Picea ,Polyporaceae ,Wood ,Evolutionary Biology ,Microbiology ,Ecology - Abstract
White-rot fungi, such as Dichomitus squalens, degrade all wood components and inhabit mixed-wood forests containing both soft- and hardwood species. In this study, we evaluated how D. squalens responded to the compositional differences in softwood [guaiacyl (G) lignin and higher mannan content] and hardwood [syringyl/guaiacyl (S/G) lignin and higher xylan content] using semi-natural solid cultures. Spruce (softwood) and birch (hardwood) sticks were degraded by D. squalens as measured by oxidation of the lignins using 2D-NMR. The fungal response as measured by transcriptomics, proteomics and enzyme activities showed a partial tailoring to wood composition. Mannanolytic transcripts and proteins were more abundant in spruce cultures, while a proportionally higher xylanolytic activity was detected in birch cultures. Both wood types induced manganese peroxidases to a much higher level than laccases, but higher transcript and protein levels of the manganese peroxidases were observed on the G-lignin rich spruce. Overall, the molecular responses demonstrated a stronger adaptation to the spruce rather than birch composition, possibly because D. squalens is mainly found degrading softwoods in nature, which supports the ability of the solid wood cultures to reflect the natural environment.
- Published
- 2018
41. A new contribution to Megasporoporia sensu lato: Six new species and three new combinations
- Author
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Ya-Rong Wang, Yu-Cheng Dai, Hong-Gao Liu, Josef Vlasák, Peter Buchanan, Yuan Yuan, and Ying-Da Wu
- Subjects
taxonomy ,phylogeny ,morphology ,Polyporaceae ,polymerase ,Microbiology ,QR1-502 - Abstract
Megasporoporia sensu lato has recently been intensively studied in China and South America, and four independent clades representing four genera have been recognized phylogenetically. In this study, more samples, mostly from subtropical and tropical Asia, Oceania, and East Africa, are analyzed. A phylogeny based on a 4-gene dataset of sequences (ITS + nLSU + mtSSU + tef) has confirmed the presence of four genera in Megasporoporia sensu lato: Jorgewrightia, Mariorajchenbergia, Megasporia, and Megasporoporia sensu stricto. Six new species, Jorgewrightia austroasiana, Jorgewrightia irregularis, Jorgewrightia tenuis, Mariorajchenbergia subleucoplaca, Megasporia olivacea, and Megasporia sinuosa, are described based on morphology and phylogenetic analysis. Three new combinations are proposed, viz. Jorgewrightia kirkii, Mariorajchenbergia epitephra, and Mariorajchenbergia leucoplaca. To date, 36 species of Megasporoporia sensu lato are accepted and an identification key to these species is provided. In addition, the identification of Dichomitus amazonicus, Dichomitus cylindrosporus, and Megasporoporia hexagonoides is discussed.
- Published
- 2022
- Full Text
- View/download PDF
42. Checklist of Reported Macrofungi in the Philippines.
- Author
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Jacob, James Kennard S., Romorosa, Excelsis S., Arguelles, Eldrin D. L. R., and Paguirigan, Jaycee Augusto G.
- Subjects
- *
MACROFUNGI , *MORPHOLOGY , *POLYPORACEAE , *SPECIES diversity , *BASIDIOMYCOTA - Abstract
The Philippines is known for its ecological diversity due to its climatic condition and geographical location. However, despite having a wide range of organisms, the macrofungal species in the country remain poorly documented. Recent mycological research in the tropics states that more species have yet to be discovered in the Philippines. Despite this, a mycological study still focuses on the ethnomycological survey and species listing. In this study, a survey of publications in macrofungi from 1906 to the present revealed that the Philippines have currently 376 validated species names of macrofungi classified under 66 families and 130 genera. Macrofungal species reported in the country belong to class Ascomycota and Basidiomycota with high species diversity under family Agaricaceae, Lycoperdaceae, Marasmiaceae, and Polyporaceae. Most studies were published internationally and were concentrated in Luzon Island, Philippines. Looking into these, we suggest a biodiversity analysis of macrofungi in other regions of the country. A shift into applying molecular systematics and biotechnology would further develop Philippine macrofungal research, given that the historical trend has focused on morphological identification and classification. We hope that this paper will be a call to further fill the gaps in what is known about the macrofungi in the Philippines, given the country's potential for further discoveries. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
43. 胶瘤菌属和孔生胶瘤菌——中国新记录属、种.
- Author
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朱学泰, 杜 璠, 冶晓燕, 范佳馨, and 蒋长生
- Subjects
- *
NATIONAL parks & reserves , *NATURE reserves , *BOTANY , *POLYPORACEAE , *BASIDIOSPORES , *BOTANICAL specimens , *BIOLOGICAL specimens - Abstract
This study reported a macrofungus specimen with special morphology collected from Liancheng National Nature Reserve in Gansu Province. Morphological characteristics observation and molecular phylogenetic analysis based on ITS sequences were performed. The results show that the specimen is Carcinomyces polyporina, belonging to Basidiomycota, Tremellomycetes, Tremellales, Carcinomycetaceae, which represents a newly recorded genus and species in China, and is the first report of this genus in East Asia. Carcinomyces polyporina is characterized by parasitism on polypores fruitbody, forming gelatinous mycocecidium, basidia with longitudinally septate, and conidia commonly gemmated from basidiospores germination. The specimen is deposited in the Herbarium of Cryptoflora, Kunming Institute of Botany, Chinese Academy of Sciences(HKAS 115765). [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
44. 黄山大型真菌的物种多样性.
- Author
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郭婷, 杨瑞恒, 汤明霞, 侯娣, 孙鑫良, 王立, 李焱, 鲍大鹏, and 周选围
- Subjects
SPECIES diversity ,NATURAL resources ,MACROFUNGI ,POLYPORACEAE ,GANODERMA ,BIODIVERSITY conservation - Abstract
Copyright of Mycosystema is the property of Mycosystema Editorial Board and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
- Published
- 2022
- Full Text
- View/download PDF
45. Solanapyrone analogues from endophytic Nigrospora sphaerica MZW-A associated with the endangered conifer Pinus wangii.
- Author
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Wang M, Chen H, Yan L, Chen J, Gan L, Shen Z, Xiong J, Hu J, and Li J
- Abstract
Eight previously undescribed solanapyrone analogues, sphasolanapyrones A-H (1-8), together with four structurally related known compounds (9-12) were obtained from the solid fermentation of Nigrospora sphaerica MZW-A, an endophytic fungus isolated from the fresh branches of the endangered conifer Pinus wangii. This study represents the first investigation on the secondary metabolites of endophytic fungus associated with this precious plant. The structures and absolute configurations of compounds 1-8 were elucidated by extensive spectroscopic analysis and electronic circular dichroism (ECD) calculations. 1 and 2 are first examples of 3,4-vic diol solanapyrone analogues, whereas 7 and 8 are rare 17-nor-solanapyrones. Among these isolates, 3, 4, 5, and 11 showed weak inhibitory against Staphylococcus aureus. In addition, compound 5 displayed weak cytotoxic effects against several tumor cell lines., Competing Interests: Declaration of competing interest The authors confirm that this article content has no conflict of interest., (Copyright © 2024. Published by Elsevier B.V.)
- Published
- 2024
- Full Text
- View/download PDF
46. Physivitrins I-R, lanostane triterpenoids with anti-inflammatory activities from the fungus Physisporinus vitreus.
- Author
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Wei FL, Liu H, Zhang SH, Du JX, Feng T, and He J
- Abstract
Chemical investigation on the rice fermentation of the fungus Physisporinus vitreus led to the isolation of ten previously undescribed lanostane triterpenoids, physivitrins I-R, and three known analogues. The new structures were elucidated on the basis of extensive spectroscopic methods, including 1D & 2D NMR, HRESIMS, UV and ECD. Physivitrins I and P exhibited significant inhibitory activities against NO production in LPS-activated RAW267.4 macrophages with IC
50 values of 8.2 and 11.5 μM, respectively. The comprehensive data indicated that P. vitreus is rich in lanostane triterpenes and has potential anti-inflammatory application prospects., Competing Interests: Declaration of competing interest The corresponding authors, on behalf of all authors of the manuscript, disclose that there is no potential competing or non-financial interest., (Copyright © 2024 Elsevier Ltd. All rights reserved.)- Published
- 2024
- Full Text
- View/download PDF
47. Ultra-Pressurized Deposition of Hydrophobic Chitosan Surface Coating on Wood for Fungal Resistance.
- Author
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Facchi SP, de Almeida DA, Abrantes KKB, Rodrigues PCDS, Tessmann DJ, Bonafé EG, da Silva MF, Gashti MP, Martins AF, and Cardozo-Filho L
- Subjects
- Antifungal Agents pharmacology, Antifungal Agents chemistry, Surface Properties, Polyporaceae, Chitosan chemistry, Chitosan pharmacology, Wood chemistry, Wood microbiology, Hydrophobic and Hydrophilic Interactions
- Abstract
Fungi ( Neolentinus lepideus , Nl , and Trametes versicolor , Tv ) impart wood rot, leading to economic and environmental issues. To overcome this issue, toxic chemicals are commonly employed for wood preservation, impacting the environment and human health. Surface coatings based on antimicrobial chitosan (CS) of high molar mass (145 × 10
5 Da) were tested as wood preservation agents using an innovative strategy involving ultra-pressurizing CS solutions to deposit organic coatings on wood samples. Before coating deposition, the antifungal activity of CS in diluted acetic acid (AcOOH) solutions was evaluated against the rot fungi models Neolentinus lepideus ( Nl ) and Trametes versicolor ( Tv ). CS effectively inhibited fungal growth, particularly in solutions with concentrations equal to or higher than 0.125 mg/mL. Wood samples ( Eucalyptus sp. and Pinus sp.) were then coated with CS under ultra-pressurization at 70 bar. The polymeric coating deposition on wood was confirmed through X-ray photoelectron spectroscopy (XPS), energy dispersive X-ray spectroscopy (EDS), scanning electron microscopy (SEM) images, and water contact angle measurements. Infrared spectroscopy (FTIR) spectra of the uncoated and coated samples suggested that CS does not penetrate the bulk of the wood samples due to its high molar mass but penetrates in the surface pores, leading to its impregnation in wood samples. Coated and uncoated wood samples were exposed to fungi ( Tv and Nl ) for 12 weeks. In vivo testing revealed that Tv and Nl fungi did not grow on wood samples coated with CS, whereas the fungi proliferated on uncoated samples. CS of high molar mass has film-forming properties, leading to a thin hydrophobic film on the wood surface (water contact angle of 118°). This effect is mainly attributed to the high molar mass of CS and the hydrogen bonding interactions established between CS chains and cellulose. This hydrophobic film prevents water interaction, resulting in a stable coating with insignificant leaching of CS after the stability test. The CS coating can offer a sustainable strategy to prevent wood degradation, overcoming the disadvantages of toxic chemicals often used as wood preservative agents.- Published
- 2024
- Full Text
- View/download PDF
48. Investigation of laccase activity in cholinium-based ionic liquids using experimental and molecular dynamics techniques.
- Author
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Chan KK, Pereira AF, Valente AI, Tavares APM, Coutinho JAP, and Ooi CW
- Subjects
- Trametes enzymology, Solvents chemistry, Choline chemistry, Polyporaceae, Laccase chemistry, Laccase metabolism, Ionic Liquids chemistry, Molecular Dynamics Simulation
- Abstract
Laccases hold great potential for biotechnological applications, particularly in environmental pollutant remediation. Laccase activity is governed by the solvent environment, and ionic liquids (ILs) emerge as a versatile solvent for activation or stabilization of enzymes. Herein, effects of cholinium-based ILs formulated with carboxylic acids, inorganic acid, and amino acids as anionic species, on the catalytic activity of laccase from Trametes versicolor were investigated by experimental and computational approaches. Experimental results showed that laccase activity was enhanced by 21.39 % in 0.5 M cholinium dihydrogen citrate ([Cho][DHC]), in relation to the laccase activity in phosphate buffer medium. However, cholinium aminoate ILs negatively affected laccase activity, as evidenced by the partial deactivation of laccase in both cholinium glycinate and cholinium phenylalaninate, at concentrations of 0.1 M and 0.5 M, respectively. Molecular dynamics studies revealed that the enhancement of laccase activity in [Cho][DHC] might be attributed to the highly stabilized and compact structure of laccase, facilitating a better internal electron transfer during the laccase-substrate interactions. Enhanced catalytic performance of laccase in [Cho][DHC] was postulated to be driven by the high accumulation level of dihydrogen citrate anions around laccase's surface. [Cho][DHC] holds great promise as a cosolvent in laccase-catalyzed biochemical reactions., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 The Author(s). Published by Elsevier B.V. All rights reserved.)
- Published
- 2024
- Full Text
- View/download PDF
49. Draft Genome Sequence of the Reference Strain of the Korean Medicinal Mushroom Wolfiporia cocos KMCC03342.
- Author
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Kim, Bogun, Min, Byoungnam, Han, Jae-Gu, Park, Hongjae, Baek, Seungwoo, Jeong, Subin, and Choi, In-Geol
- Subjects
- *
WOOD-decaying fungi , *BROWN rot , *MUSHROOMS , *WHOLE genome sequencing , *RNA sequencing , *POLYPORACEAE , *GENETIC techniques , *GENE clusters - Abstract
Wolfiporia cocos is a wood-decay brown rot fungus belonging to the family Polyporaceae. While the fungus grows, the sclerotium body of the strain, dubbed Bokryeong in Korean, is formed around the roots of conifer trees. The dried sclerotium has been widely used as a key component of many medicinal recipes in East Asia. Wolfiporia cocos strain KMCC03342 is the reference strain registered and maintained by the Korea Seed and Variety Service for commercial uses. Here, we present the first draft genome sequence of W. cocos KMCC03342 using a hybrid assembly technique combining both short- and long-read sequences. The genome has a total length of 55.5 Mb comprised of 343 contigs with N50 of 332 kb and 95.8% BUSCO completeness. The GC ratio was 52.2%. We predicted 14,296 protein-coding gene models based on ab initio gene prediction and evidence-based annotation procedure using RNAseq data. The annotated genome was predicted to have 19 terpene biosynthesis gene clusters, which was the same number as the previously sequenced W. cocos strain MD-104 genome but higher than Chinese W. cocos strains. The genome sequence and the predicted gene clusters allow us to study biosynthetic pathways for the active ingredients of W. cocos. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
50. ROT EVALUATION IN SPRUCE LOGS AND ROT REFLECTION INTO DIMENSIONS OF CHIPS FOR PARTICLEBOARDS .
- Author
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Satinová, Viktória, Hlaváč, Pavol, Iždinský, Ján, and Reinprecht, Ladislav
- Subjects
- *
NORWAY spruce , *PARTICLE board , *WOOD chips , *POLYPORACEAE , *ACOUSTIC devices - Abstract
Chips for particleboards (PBs) can be obtained from different tree species or other lignin-saccharide sources. In this work, the following factors are analysed: (1) the degree and type of fungal rot in the Norway spruce (Picea abies) logs using the drill-resistance device “Resistograph” and the acoustic devices “Sylvatest-Duo”, “Fakopp” and “Arbotom”, and (2) following the reflection of wood-rot into dimensions of chips prepared for PBs. Using the devices, milder damage of logs caused by the white-rot Dark honey fungus (Armillaria ostoyae) was not detectable, but on the contrary, more serious damage of logs with the brown-rot Red banded polypore fungus (Fomitopsis pinicola) was clearly detectable. Wood chips prepared from the rotten logs had smaller dimensions compared to chips from the sound logs. By the sieve analysis, using the mesh diameters from 80 mm to 0.125 mm, the total percentage fractions marked as 7, 4, 2, 1, 0.5, 0.25, 0.125 and 0 were 31.1% for chips from the sound logs, 41.89% for chips from logs attacked by white rot, and 71.13% for chips from log attacked by brown rot. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
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