8,985 results on '"photosynthetic bacteria"'
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2. Bioreduction mechanisms of high-concentration hexavalent chromium using sulfur salts by photosynthetic bacteria
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Su, Yan-Qiu, Min, Shuang-Nan, Jian, Xin-Yi, Guo, Yuan-Cheng, He, Shu-Hao, Huang, Chun-Yi, Zhang, Zheng, Yuan, Shu, and Chen, Yang-Er
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- 2023
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3. Valorization of food waste fermentation liquid into single cell protein by photosynthetic bacteria via stimulating carbon metabolic pathway and environmental behaviour
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Zhu, Zizeng, Wu, Yang, Hu, Wanying, Zheng, Xiong, and Chen, Yinguang
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- 2022
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4. Cometabolic biodegradation system employed subculturing photosynthetic bacteria: A new degradation pathway of 4-chlorophenol in hypersaline wastewater
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Wang, Liang, Hu, Zhongce, Hu, Mian, Zhao, Jun, Zhou, Peijie, Zhang, Yongjie, Zheng, Xin, Zhang, Yifeng, Hu, Zhong-Ting, and Pan, Zhiyan
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- 2022
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5. Crystal structure of the alternative complex III from the phototrophic bacterium Chloroflexus aurantiacus
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Wu, Wenping, Fang, Han, He, Huimin, Wu, Jingyi, Gong, Zijun, Li, Chunyang, Pei, Xinkai, and Xu, Xiaoling
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- 2025
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6. A Native LH1–RC–HiPIP Supercomplex from an Extremophilic Phototroph.
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Tani, Kazutoshi, Kanno, Ryo, Nagashima, Kenji V. P., Kawakami, Mai, Hiwatashi, Naho, Nakata, Kazuna, Nagashima, Sakiko, Inoue, Kazuhito, Takaichi, Shinichi, Purba, Endang R., Hall, Malgorzata, Yu, Long-Jiang, Madigan, Michael T., Mizoguchi, Akira, Humbel, Bruno M., Kimura, Yukihiro, and Wang-Otomo, Zheng-Yu
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ELECTRON donors , *CHARGE exchange , *LIFE sciences , *PHOTOSYNTHETIC bacteria , *ELECTRON tunneling , *SURFACE charges - Abstract
Halorhodospira (Hlr.) halophila strain BN9622 is an extremely halophilic and alkaliphilic purple phototrophic bacterium and has been widely used as a model for exploring the osmoadaptive and photosynthetic strategies employed by phototrophic extreme halophiles that enable them to thrive in hypersaline environments. Here we present the cryo-EM structures of (1) a unique native Hlr. halophila triple-complex formed from light-harvesting (LH1), the reaction center (RC), and high-potential iron–sulfur protein (HiPIP) at 2.44 Å resolution, and (2) a HiPIP-free LH1–RC complex at 2.64 Å resolution. Differing from the LH1 in the Hlr. halophila LH1–LH2 co-complex where LH1 encircles LH2, the RC-associated LH1 complex consists of 16 (rather than 18) αβ-subunits circularly surrounding the RC. These distinct forms of LH1 indicate that the number of subunits in a Hlr. halophila LH1 complex is flexible and its size is a function of the photocomplex it encircles. Like LH1 in the LH1–LH2 co-complex, the RC-associated LH1 complex also contained two forms of αβ-polypeptides and both dimeric and monomeric molecules of bacteriochlorophyll a. The majority of the isolated Hlr. halophila LH1–RC complexes contained the electron donor HiPIP bound to the surface of the RC cytochrome subunit near the heme-1 group. The bound HiPIP consisted of an N-terminal functional domain and a long C-terminal extension firmly attached to the cytochrome subunit. Despite overall highly negative surface-charge distributions for both the cytochrome subunit and HiPIP, the interface between the two proteins was relatively uncharged and neutral, forming a pathway for electron tunneling. The structure of the Hlr. halophila LH1–RC–HiPIP complex provides insights into the mechanism of light energy acquisition coupled with a long-distance electron donating process toward the charge separation site in a multi-extremophilic phototroph. The bacterial light-harvesting–reaction center in complex with its electron donor HiPIP in their native form is presented, characterized and discussed with mechanistic implications for the photosynthetic electron transfer pathway. [ABSTRACT FROM AUTHOR]
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- 2025
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7. Insights into the divergence of the photosynthetic LH1 complex obtained from structural analysis of the unusual photocomplexes of Roseospirillum parvum.
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Wang, Xiang-Ping, Wang, Guang-Lei, Fu, Yuan, Minamino, Akane, Zou, Mei-Juan, Ma, Fei, Xu, Bo, Wang-Otomo, Zheng-Yu, Kimura, Yukihiro, Madigan, Michael T., Overmann, Jörg, and Yu, Long-Jiang
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PHOTOSYNTHETIC bacteria , *AMINO acid sequence , *ANTENNAS (Electronics) , *GENOMICS , *SOLAR energy - Abstract
Purple phototrophic bacteria produce two kinds of light-harvesting complexes that function to capture and transmit solar energy: the core antenna (LH1) and the peripheral antenna (LH2). The apoproteins of these antennas, encoded respectively by the genes pufBA and pucBA within and outside the photosynthetic gene cluster, respectively, exhibit conserved amino acid sequences and structural topologies suggesting they were derived from a shared ancestor. Here we present the structures of two photosynthetic complexes from Roseospirillum (Rss.) parvum 930I: an LH1–RC complex and a variant of the LH1 complex also encoded by pufBA that we designate as LH1′. The LH1–RC complex forms a closed elliptical structure consisting of 16 pairs of αβ-polypeptides that surrounds the RC. By contrast, the LH1′ complex is a closed ring structure composed of 14 pairs of αβ-polypeptides, and it shows significant similarities to LH2 complexes both spectrally and structurally. Although LH2-like, the LH1′ complex is larger than any known LH2 complexes, and genomic analyses of Rss. parvum revealed the absence of pucBA, genes that encode classical LH2 complexes. Characterization of the unique Rss. parvum photocomplexes not only underscores the diversity of such structures but also sheds new light on the evolution of light-harvesting complexes from phototrophic bacteria. Wang et al. present the structures of two unique light-harvesting complexes from Roseospirillum parvum, enhancing the understanding of solar energy capture in purple phototrophic bacteria. These findings highlight the evolutionary diversity of light-harvesting complexes in purple phototrophic bacteria, revealing adaptations that may have originated from a common ancestor. [ABSTRACT FROM AUTHOR]
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- 2024
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8. Toward Artificial Photosynthetic Assemblies Inspired by Photosynthetic Bacteria.
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Han, Yifei, Li, Zhan‐Ting, and Tian, Jia
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PHOTOSYSTEMS , *ARTIFICIAL photosynthesis , *CYANOBACTERIA , *PORPHYRINS , *SIMULATION methods & models - Abstract
The photosynthetic assemblies in bacteria, as critical structures in early evolutionary photosynthesis, are pivotal for understanding the molecular mechanisms of photosynthesis and for the design of artificial photosynthetic systems. In recent decades, various artificial systems based on synthetic molecules have been developed to mimic these photosynthetic assemblies from structures to functions. This review summarizes the latest advancements in mimicking the photosynthetic assembly systems, discussing three fundamental models: the chlorosome and related complexes in green bacteria, the chromatophore and reaction center system in purple bacteria, and the phycobilisome and photosystem II (PSII) in cyanobacteria, along with their representative mimicking systems. We also address the challenges and unexplored areas in the simulation of photosynthetic systems. [ABSTRACT FROM AUTHOR]
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- 2024
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9. 笼养鸭粪水酸化贮藏条件对其保肥与重金属去除的影响.
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向秋豪, 张 琦, 崔 宪, 刘玉环, 王允圃, 巫小丹, 郑洪立, 彭 红, 赖江玲, 李 锐, 刘晓成, 黄 娜, 何幼军, and 阮榕生
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HEAVY metal toxicology , *PHOTOSYNTHETIC bacteria , *WATER pollution , *PADDY fields , *HEAVY metals - Abstract
The caged duck industry in China has developed rapidly because it can solve the pollution problem of the water environment caused by the free-range breeding of the duck to a large extent. However, the feces of caged ducks not only yield large volumes but also a high moisture content, which does not match the time required for fertilizer demanding of major crops such as paddy rice, and often requires storage. The traditional long-term open-storage method of high moisture content duck feces (HMCDF) leads to a great loss of ammonia nitrogen and a prominent problem of heavy metal (Cu2+ and Zn2+) residue, which leads to the loss of the value of HMCDF as a fertilizer. To promote the sustainable development of the caged duck industry, it is essential to improve traditional open storage methods for HMCDF. Traditionally, the long-term open-storage of HMCDF results in rapid nitrogen escape, leading to low nitrogen content and high residual of heavy metals, rendering it useless as fertilizer. In this study, the nitrogen, phosphorus, potassium, and carbon content, as well as the concentrations of Cu2+ and Zn2+ in the liquid phase of HMCDF, were continuously tracked and analyzed under maintained quasi-anaerobic storage conditions for a duration of 12 months. During this process, effective microorganisms (EM) and photosynthetic bacteria (PSB) were inoculated sequentially, with pH monitored every two weeks, and sulfuric acid was gradually added to maintain the liquid phase pH at the required experimental levels. After 12 months of quasi-anaerobic storage, phase separation occurred in the substances in HMCDF, with the formation of floating layer, liquid phase, and solid sediment. There were significant differences (P<0.05) among the different acidity treatments. In the acidic environment of pH 4, the total organic carbon (TOC) in the liquid phase of HMCDF accumulated significantly (P<0.05). At the end of storage, the TOC content reached 10 366.67 mg/L; the ammonium nitrogen (NH4+ -N) content first increased and then stabilized, effectively preserving nitrogen. At the end of storage, the NH4+ -N content reached 2 785.07 mg/L; the total phosphorus (TP) content first decreased and then gradually recovered to 99.14% of the initial value. At the end of storage, the TP content reached 249.50 mg/L. indicating that the retention effect of phosphorus in the liquid phase of HMCDF was significant; the removal rates of Cu2+ and Zn2+ in the liquid phase were 82.02% and 90.15%, respectively. At the end of storage, the Cu2+ and Zn2+ contents were 0.64 mg/mL and 0.16 mg/mL, respectively, significantly reducing the heavy metal pollution risk in the fertilizer utilization of HMCDF; while the K+ content increased by 11.02% compared to the initial value, at the end of storage, the K+ content reached 2 430.67 mg/L, significantly enhancing the fertilizer efficacy of HMCDF used as a basal fertilizer after quasi-anaerobic storage. In the quasianaerobic storage of HMCDF, maintaining the pH of the liquid phase at 4 and sequentially inoculating the liquid with EM and PSB achieves the best preservation effect and the highest heavy metal removal efficiency. This is an effective technical approach to solving the HMCDF problem in large-scale caged duck farms. [ABSTRACT FROM AUTHOR]
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- 2024
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10. Self-aggregation of 132,132-disubstituted bacteriochlorophyll-d analog.
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Hashimoto, Yamato, Takeda, Toyoho, Ogasawara, Shin, and Tamiaki, Hitoshi
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TRITON X-100 , *STERIC hindrance , *PHOTOSYNTHETIC bacteria , *ZINC compounds , *METHYL groups - Abstract
Zinc methyl 132,132-disubstituted 3-hydroxymethyl-pyropheophorbides-a were prepared as models of bacteriochlorophyll-d, which self-aggregated in the main light-harvesting antenna (chlorosome) of photosynthetic green bacteria. The synthetic zinc 31-hydroxy-131-oxo-chlorins possessing methyl and methoxycarbonyl groups at the 132-position could not self-aggregate in an aqueous Triton X-100 solution. However, another model compound bearing an ethane-1,2-diyl group at the 132-position did self-aggregate under the same conditions to give red-shifted and broadened Qy and Soret absorption bands. The spiro-cyclopropane condensation slightly suppressed the chlorosome-like self-aggregation due to an increase in the steric hindrance around the 13-carbonyl group. The red-shifted and broadened values of these bands by the self-aggregation were dependent on the 132-substituents. The 132-substitution substantially controlled the aqueous J-aggregation. [ABSTRACT FROM AUTHOR]
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- 2024
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11. Direct interspecies electron transfer for environmental treatment and chemical electrosynthesis: A review.
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Fang, Zhen, Huang, Yu, Tang, Sirui, Fan, Qichao, Zhang, Yafei, Xiao, Leilei, and Yong, Yang-Chun
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CARBON dioxide reduction , *PHOTOSYNTHETIC bacteria , *CHARGE exchange , *MICROBIAL remediation , *ENVIRONMENTAL remediation , *ANAEROBIC digestion , *ELECTROSYNTHESIS - Abstract
Microbial electric syntrophy, involving direct electron transfer between electron-donating strains and electron-accepting strains, could reduce more than 50% of methane emissions and remove 90% of nitrate pollution in some wastewaters. Microbial electric syntrophy is also a key natural process allowing the survival of bacteria in harsh environmental conditions. Here we review natural and artificial cases of interspecies electron transfer in microbial syntrophy, with emphasis on methane production, electroactive bacteria, methanogens, anaerobic methane-oxidizing consortia, Geobacter species, phototrophic bacteria, co-cultures, anaerobic digestion, environmental remediation and microbial electrosynthesis. Environmental remediation includes nitrogen removal, reductive dechlorination and pollutant degradation. Microbial electrosynthesis can be used for carbon dioxide reduction. Conductive proteins and materials, and light-assisted electron transfer contribute to the direct interspecies electron transfer. [ABSTRACT FROM AUTHOR]
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- 2024
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12. Aerobic anoxygenic phototrophic bacteria correlate with picophytoplankton across the Atlantic Ocean but show unique vertical bioenergetics.
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Gazulla, Carlota R., Koblížek, Michal, Mercado, Jesús M., Gasol, Josep M., Sánchez, Olga, and Ferrera, Isabel
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PHOTOSYNTHETIC bacteria , *EUPHOTIC zone , *OCEAN zoning , *DEPTH profiling , *ENERGY harvesting - Abstract
Aerobic anoxygenic phototrophic (AAP) bacteria are a common part of microbial communities in the sunlit ocean. They contain bacteriochlorophyll a (BChl a)‐based photosystems that harvest solar energy for their metabolism. Across different oceanic regions, AAP bacteria seem to be more abundant in eutrophic areas, associated with high chlorophyll concentrations. While most previous studies focused on surface samplings, there is limited information regarding their vertical distribution in euphotic zones of the major ocean basins. Here, we hypothesized that AAP bacteria will follow a similar structure to the chlorophyll depth profile across areas with different degrees of stratification. To test this hypothesis, we enumerated AAP cells and determined bulk water BChl a concentrations along the photic zone of a latitudinal transect in the South and Central Atlantic Ocean. Overall, the distribution of AAP bacteria was highly correlated to that of chlorophyll a and to the abundance of picophytoplankton across both vertical and horizontal gradients. Furthermore, estimated light energy captured across the water column showed that, while AAP bacteria share a common latitudinal pattern of light absorption with picophytoplankton, they display a unique vertical arrangement with highest photoheterotrophic activity in the top 50 m of the surface ocean. [ABSTRACT FROM AUTHOR]
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- 2024
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13. Probiotics application in aquaculture: its potential effects, current status in China and future prospects.
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Rahayu, Silvana, Amoah, Kwaku, Yu Huang, Jia Cai, Bei Wang, Shija, Vicent Michael, Xiao Jin, Anokyewaa, Melody Abena, and Mouyan Jiang
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WATER quality management ,PHOTOSYNTHETIC bacteria ,DENITRIFYING bacteria ,DIETARY proteins ,PLANT proteins ,WOOD pellets - Abstract
Today's increasing demand for aquaculture production is accompanied by various challenges such as diseases, broodstock improvement, domestication, development of suitable pellets and feeding methods, hatchery technology, and water quality management. Thus, probiotic usage has been reported as the ideal alternative to antibiotics, other chemotherapeutics, and additional supplements to other alternative ingredients. The main beneficial roles of probiotics include the enhancement of disease and stress resistance, immunity, promotion of growth and reproduction, improvement of digestion, provide several nutrients, and enhancement of water microbial composition. To guarantee safety, the probiotics provided must be noninvasive and non-pathogenic. The use of probiotics in aquaculture, either directly or in combination with alternative materials such as plant protein diets, vitamins, microalgae, fermented products, and so on, has been shown to improve the health and growth of aquatic animals and offer significant benefits to the sustainability of the industry. There is advocacy for a systematic approach to conducting innovative research to unearth new putative strains, which is substantial in ensuring sustainable probiotic usage and, thus, can help in the continuous development of the aquaculture industry especially in China. Some examples of the probiotics found in China are mainly photosynthetic bacteria (PSB) which are autotroph bacteria capable of photosynthesis, antagonistic bacteria (Pseudoalteromonas sp., Flavobacterium sp., Alteromonas sp., Phaeobacter sp., Bacillus sp., etc.), bacteria that contribute nutrients and enzymes during digestion (lactic acid bacteria, yeasts, etc.), bacteria that improve water quality (nitrifying bacteria, denitrifying bacteria, etc.), Bdellovibrio, and other probiotics. This review also focuses on the potential use of probiotics in aquaculture, especially in China, and probiotics' prospective future role. [ABSTRACT FROM AUTHOR]
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- 2024
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14. 光合细菌废水处理技术的研究进展.
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冉婷婷, 李乐卓, 王兆冉, and 石瑞莲
- Abstract
Copyright of Industrial Water Treatment is the property of CNOOC Tianjin Chemical Research & Design Institute and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
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- 2024
- Full Text
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15. Photosynthetic Bacteria: Light-Responsive Biomaterials for Anti-Tumor Photodynamic Therapy
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Jiang Y
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photosynthetic bacteria ,pdt ,hypoxia ,cyanobacteria ,purple bacteria ,ptt ,Medicine (General) ,R5-920 - Abstract
Yuan Jiang Department of Rehabilitation Medicine, School of Clinical Medicine and The First Affiliated Hospital of Chengdu Medical College, Chengdu, Sichuan, People’s Republic of ChinaCorrespondence: Yuan Jiang, Email 85741920@qq.comAbstract: Photodynamic therapy (PDT) is a promising noninvasive tumor treatment modality that relies on generating reactive oxygen species (ROS) and requires an adequate oxygen supply to the target tissue. However, hypoxia is a common feature of solid tumors and profoundly restricts the anti-tumor efficacy of PDT. In recent years, scholars have focused on exploring nanomaterial-based strategies for oxygen supplementation and integrating non-oxygen-consuming treatment approaches to overcome the hypoxic limitations of PDT. Some scholars have harnessed the photosynthetic oxygen production of cyanobacteria under light irradiation to overcome tumor hypoxia and engineered them as carriers of photosensitizers instead of inorganic nanomaterials, resulting in photosynthetic bacteria (PSB) attracting significant attention. Recent studies have shown that light-triggered PSB can exhibit additional properties, such as photosynthetic hydrogen production, ROS generation, and photothermal conversion, facilitating their use as promising light-responsive biomaterials for enhancing the anti-tumor efficacy of PDT. Therefore, understanding PSB can provide new insights and ideas for future research. This review mainly introduces the characteristics of PSB and recent research on light-triggered PSB in anti-tumor PDT to enrich our knowledge in this area. Finally, the challenges and prospects of using PSB to enhance the anti-tumor efficacy of PDT were also discussed.Keywords: photosynthetic bacteria, PDT, hypoxia, cyanobacteria, purple bacteria, PTT
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- 2025
16. Research progress of photosynthetic bacteria wastewater treatment technology
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RAN Tingting, LI Lezhuo, WANG Zhaoran, and SHI Ruilian
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photosynthetic bacteria ,wastewater treatment ,resource recovery ,Environmental technology. Sanitary engineering ,TD1-1066 - Abstract
Large amount of organic matter in wastewater is the main reason for the deterioration of environmental water bodies. Traditional wastewater treatment technologies have good treatment efficiency, but there are problems such as secondary pollution, high treatment costs, and the inability to recycle organic matter from wastewater. Therefore, it is particularly necessary to find a green, environmental friendly, and sustainable alternative solution. Photosynthetic bacteria(PSB) wastewater treatment technology, as a potential resource utilization method, has received widespread attention in the field of wastewater treatment. This article reviewed the research progress of photosynthetic bacteria wastewater treatment technology in wastewater treatment in recent years, with a focus on exploring the pathways and influencing factors of pollutant degradation by photosynthetic bacteria. It also introduced the main forms, large-scale applications, and resource utilization status of photosynthetic bacteria wastewater treatment technology. Finally, the future development trends of photosynthetic bacteria wastewater treatment and resource utilization were discussed.
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- 2024
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17. The potential use of cow (Bos taurus) and swiftlet (Collocalia vestita) feces as basic ingredients of compost bioproducts: A review.
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Ramadhan, N. F., Said, M. I., and Jamila, J.
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NATURAL resources , *CATTLE , *PHOTOSYNTHETIC bacteria , *BIOLOGICAL products , *LACTIC acid , *ORGANIC wastes - Abstract
Feces are livestock by-products which are waste from undigested feed ingredients. It will pollute the environment and can cause various diseases if no processing is done. Feces processing can be done through the process of bioconversion into compost bioproducts. There is a promising development potential for the utilization of feces for bioproducts due to its abundant availability, but it has not been utilized optimally. Feces is material from biological resources originating from livestock which is processed using technology so that it becomes a new or semi-finished product. The results of this process will have a large added value and economical potential. Cow feces contain organic and inorganic components, micronutrients and thousands of types of bacteria. These bacteria consist of photosynthetic bacteria, fixation and lactic acid. Application to soil, water or organic waste media will result in a regeneration process that takes place on an ongoing basis. Edible-nest swiftlet feces contain very high minerals and are suitable for soil. It contains nitrogen, phosphorus, potassium, magnesium and sulfur as well as organic matter which are effective for improving and enriching soil structure. This review discusses and explains the potential use of cow feces and edible-nest swiftlets as basic ingredients for making compost bioproducts. [ABSTRACT FROM AUTHOR]
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- 2024
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18. Research of photosynthetic microorganisms in the resourceful treatment of livestock and poultry breeding wastewater
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SUN Xu, XIE Tong, ZHANG Chaojie, ZHANG Yalei, and ZHOU Xuefei
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livestock and poultry breeding wastewater ,microalgae ,photosynthetic bacteria ,resourceful treatment ,Environmental technology. Sanitary engineering ,TD1-1066 - Abstract
Livestock and poultry breeding wastewater has a complex composition by diverse types and high concentrations of pollutants. The current treatment of these waste water has gradually shifted from traditional treatment to resource utilization technologies. Treatment technique based on photosynthetic microorganisms presents a financially potential alternative to traditional wastewater treatment technology, due to the water quality features and resource recovery potential of livestock and poultry breeding wastewater. This article introduced the characteristics and resource utilization trends of livestock and poultry breeding wastewater, along with the limitations of conventional wastewater treatment technologies. The advantages and disadvantages of photosynthetic microorganism-based treatment technologies and traditional methods were compared, and the principles of the technology from the perspectives of microalgae and photosynthetic bacteria were explained. Additionally, several composite treatment technologies based on photosynthetic microorganism were also highlighted, as well as value-added products that could be generated. Finally, it was proposed that photosynthetic microbial treatment technologies should aim for larger scales, integrate environmental applicability, and realize the potential for enhanced product value in the future.
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- 2024
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19. Contributions of David Mauzerall to photosynthesis research - celebrating his 95th birthday
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G. GOVINDJEE, O. CANAANI, R.A. CELLARIUS, B. DINER, E. GREENBAUM, H.J.M. HOU, N.Y. KIANG, J.S. LINDSEY, D.L. MAUZERALL, M.E. MAUZERALL, M. SEIBERT, and A. STIRBET
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chlorophyll ,chlorophyll a fluorescence ,cyanobacteria ,excitation energy transfer ,frank henry westheimer ,photoacoustics ,photosynthetic bacteria ,porphyrins ,samuel granick ,the rockefeller university ,university of chicago ,Botany ,QK1-989 - Abstract
We honor here Professor David Mauzerall, a pioneer in the fields of photochemistry and photobiology of porphyrins and chlorophylls in vitro and in vivo, on the occasion of his 95th birthday. Throughout his career at The Rockefeller University, he refined our understanding of how chlorophyll converts light energy into chemical energy. He exploited top-of-the-line laser technology in developing photoacoustics and a variety of other innovative experimental approaches. His experimental work and conceptual insights contributed greatly to our understanding of photosynthesis and the possible role of photosynthesis in the origin of life. His contributions include many landmark single-authored and collaborative papers, and his legacy includes the training of others who have become authorities themselves. After providing a brief description of his research accomplishments, we include tributes from several of his coworkers and his daughters highlighting their valuable experiences with David Mauzerall on this milestone birthday.
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- 2024
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20. Architectures of photosynthetic RC-LH1 supercomplexes from Rhodobacter blasticus.
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Peng Wang, Christianson, Bern M., Ugurlar, Deniz, Ruichao Mao, Yi Zhang, Ze-Kun Liu, Ying-Yue Zhang, Gardner, Adrian M., Jun Gao, Yu-Zhong Zhang, and Lu-Ning Liu
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PHOTOSYNTHETIC bacteria , *CHARGE exchange , *HYDROQUINONE , *QUINONE , *MONOMERS - Abstract
The reaction center-light-harvesting complex 1 (RC-LH1) plays an essential role in the primary reactions of bacterial photosynthesis. Here, we present high-resolution structures of native monomeric and dimeric RC-LH1 supercomplexes from Rhodobacter (Rba.) blasticus using cryo-electron microscopy. The RC-LH1 monomer is composed of an RC encircled by an open LH1 ring comprising 15 aß heterodimers and a PufX transmembrane polypeptide. In the RC-LH1 dimer, two crossing PufX polypeptides mediate dimerization. Unlike Rhodabacter sphaeroides counterpart, Rba. blasticus RC-LH1 dimer has a less bent conformation, lacks the PufY subunit near the LH1 opening, and includes two extra LH1 aß subunits, forming a more enclosed S-shaped LH1 ring. Spectroscopic assays reveal that these unique structural features are accompanied by changes in the kinetics of quinone/quinol trafficking between RC-LH1 and cytochrome bc1. Our findings reveal the assembly principles and structural variability of photosynthetic RC-LH1 supercomplexes, highlighting diverse strategies used by phototrophic bacteria to optimize light-harvesting and electron transfer in competitive environments. [ABSTRACT FROM AUTHOR]
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- 2024
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21. Cryo-EM structure of HQNO-bound alternative complex III from the anoxygenic phototrophic bacterium Chloroflexus aurantiacus.
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Xin, Jiyu, Min, Zhenzhen, Yu, Lu, Yuan, Xinyi, Liu, Aokun, Wu, Wenping, Zhang, Xin, He, Huimin, Wu, Jingyi, Xin, Yueyong, Blankenship, Robert E, Tian, Changlin, and Xu, Xiaoling
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ELECTRON paramagnetic resonance , *ELECTROPHILES , *PHOTOSYNTHETIC bacteria , *ENZYMATIC analysis , *MOLECULAR dynamics - Abstract
Alternative complex III (ACIII) couples quinol oxidation and electron acceptor reduction with potential transmembrane proton translocation. It is compositionally and structurally different from the cytochrome bc1/b6f complexes but functionally replaces these enzymes in the photosynthetic and/or respiratory electron transport chains (ETCs) of many bacteria. However, the true compositions and architectures of ACIIIs remain unclear, as do their structural and functional relevance in mediating the ETCs. We here determined cryogenic electron microscopy structures of photosynthetic ACIII isolated from Chloroflexus aurantiacus (CaACIIIp), in apo-form and in complexed form bound to a menadiol analog 2-heptyl-4-hydroxyquinoline-N-oxide. Besides 6 canonical subunits (ActABCDEF), the structures revealed conformations of 2 previously unresolved subunits, ActG and I, which contributed to the complex stability. We also elucidated the structural basis of menaquinol oxidation and subsequent electron transfer along the [3Fe–4S]-6 hemes wire to its periplasmic electron acceptors, using electron paramagnetic resonance, spectroelectrochemistry, enzymatic analyses, and molecular dynamics simulations. A unique insertion loop in ActE was shown to function in determining the binding specificity of CaACIIIp for downstream electron acceptors. This study broadens our understanding of the structural diversity and molecular evolution of ACIIIs, enabling further investigation of the (mena)quinol oxidoreductases–evolved coupling mechanism in bacterial energy conservation. The structure of alternative complex III from Chloroflexus aurantiacus elucidates the molecular mechanism of an ancient quinol:auracyanin oxidoreductase. [ABSTRACT FROM AUTHOR]
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- 2024
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22. 光合微生物在畜禽养殖废水资源化 处理中的研究进展.
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孙 旭, 谢 彤, 张超杰, 张亚雷, and 周雪飞
- Abstract
Copyright of Industrial Water Treatment is the property of CNOOC Tianjin Chemical Research & Design Institute and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
- Published
- 2024
- Full Text
- View/download PDF
23. An innovative, sustainable, and environmentally friendly approach for wheat drought tolerance using vermicompost and effective microorganisms: upregulating the antioxidant defense machinery, glyoxalase system, and osmotic regulatory substances.
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Talaat, Neveen B. and Abdel-Salam, Sameh A. M.
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GLUTATHIONE reductase , *CULTIVARS , *LACTIC acid bacteria , *PHOTOSYNTHETIC bacteria , *SUPEROXIDE dismutase , *GLUTATHIONE peroxidase , *GLYOXALASE - Abstract
Background: Vermicompost contains humic acids, nutrients, earthworm excretions, beneficial microbes, growth hormones, and enzymes, which help plants to tolerate a variety of abiotic stresses. Effective microorganisms (EM) include a wide range of microorganisms' e.g. photosynthetic bacteria, lactic acid bacteria, yeasts, actinomycetes, and fermenting fungi that can stimulate plant growth and improve soil fertility. To our knowledge, no study has yet investigated the possible role of vermicompost and EM dual application in enhancing plant tolerance to water scarcity. Methods: Consequently, the current study investigated the effectiveness of vermicompost and EM in mitigating drought-induced changes in wheat. The experiment followed a completely randomized design with twelve treatments. The treatments included control, as well as individual and combined applications of vermicompost and EM at three different irrigation levels (100%, 70%, and 30% of field capacity). Results: The findings demonstrated that the application of vermicompost and/or EM significantly improved wheat growth and productivity, as well as alleviated drought-induced oxidative damage with decreased the generation of superoxide anion radical and hydrogen peroxide. This was achieved by upregulating the activities of several antioxidant enzymes, including superoxide dismutase, catalase, peroxidase, ascorbate peroxidase, glutathione peroxidase, monodehydroascorbate reductase, dehydroascorbate reductase, and glutathione reductase. Vermicompost and/or EM treatments also enhanced the antioxidant defense system by increasing the content of antioxidant molecules such as ascorbate, glutathione, phenolic compounds, and flavonoids. Additionally, the overproduction of methylglyoxal in water-stressed treated plants was controlled by the enhanced activity of the glyoxalase system enzymes; glyoxalase I and glyoxalase II. The treated plants maintained higher water content related to the higher content of osmotic regulatory substances like soluble sugars, free amino acids, glycinebetaine, and proline. Conclusions: Collectively, we offer the first report that identifies the underlying mechanism by which the dual application of vermicompost and EM confers drought tolerance in wheat by improving osmolyte accumulation and modulating antioxidant defense and glyoxalase systems. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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24. Microbial-Derived Carotenoids and Their Health Benefits.
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Sharma, Chikanshi, Kamle, Madhu, and Kumar, Pradeep
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PHOTOSYNTHETIC bacteria , *ZEAXANTHIN , *CAROTENOIDS , *ASTAXANTHIN , *DIETARY supplements , *CHEMICAL properties - Abstract
Natural carotenoids (CARs) such as β-carotene, astaxanthin, lutein, norbixin, bixin, capsanthin, lycopene, β-Apo-8-carotenal, canthaxanthin, β-apo-8-carotenal-ester, and zeaxanthin are being explored for possible applications in feed, food, cosmeceuticals, and nutraceuticals. Three primary areas of carotenoid research are emerging: (1) encapsulations for improved chemical and physical properties; (2) natural source carotenoid manufacturing; and (3) preclinical, epidemiological, and clinical studies of carotenoids' potential health benefits. The recent advancements in research on the chemistry and antioxidant activity, marketing strategies, dietary sources, bioavailability, and bioaccessibility, extraction, dietary consumption, encapsulating techniques, and health advantages of carotenoids are all extensively discussed in this review. Carotenoids are pigments found naturally in most fruits and vegetables, algae, plants, and photosynthetic bacteria. Carotenoids cannot be synthesized by humans and must be consumed in the form of food or supplements. There are several roles for carotenoids in human health. Although individual carotenoids may function in different ways, their main action is to act as antioxidants. There are validated techniques for separating and purifying carotenoids, yet, industrial production requires the development of economically viable techniques for larger-scale implementation. Carotenoids have been shown to boost cognitive performance and cardiovascular health, as well as help prevent some types of cancer. Despite evidence for carotenoids' health benefits, major population-based supplementation trials have yielded conflicting outcomes for several carotenoids. This review includes recent developments in carotenoid metabolism and nutritional and health advantages. It also offers an outlook on future directions in these areas. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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25. Diversity and ecological assembly process of aerobic anoxygenic phototrophic bacteria in a low irradiation area, Three Gorges Reservoir.
- Author
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Huo, Lixin, Ma, Anran, Liu, Hong, Wang, Xingzu, and Song, Cheng
- Subjects
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PHOTOSYNTHETIC bacteria , *GORGES , *STOCHASTIC processes , *SPATIAL variation , *MICROBIAL communities , *IRRADIATION - Abstract
Aerobic anoxygenic phototrophic bacteria (AAPB) are significant bacterial groups in aquatic ecosystems, known for their rapid growth and photoheterotrophic characteristics. However, the distribution and ecological assembly process of AAPB in low irradiation freshwater basins remain unclear, warranting further investigation. In this study, we present the diversity, abundance, spatial variations, ecological process, and community interaction of AAPB in sediment of Three Gorges Reservoir (TGR) under low irradiation. Our findings demonstrate the dominant genera of AAPB community that exist in the TGR area also are appeared in different waters, with some regional preference. Moreover, the concentration of pufM gene, an indicator for AAPB, maintains a consistently high numerical level ranging from (2.21 ± 0.44) × 104 to (9.98 ± 0.30) × 107 gene copies/g. Although solar irradiation is suggested as the major factor affecting AAPB, it remains unclear whether and how AAPB differ between regions due to varying solar irradiation levels. Our results show spatial differences between total bacteria and AAPB communities, with significant differences observed only in AAPB. Geographical and environmental factor contributed less than 10% to the spatial difference of community, with sediment type and environmental factors being the key factors influencing microbial community structure. The stochastic process plays a dominant role in the aggregation and replacement of AAPB communities, among which the most contribution is dispersal limitation. For AAPB network, Yoonia and Gemmobacter are the hubs for modules. Those results valuable insights into the AAPB communities in TGR with low irradiation. [Display omitted] [ABSTRACT FROM AUTHOR]
- Published
- 2024
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26. Rapid sulfurization obscures carotenoid distributions in modern euxinic environments.
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Ma, Jian, Cui, Xingqian, Liu, Xiao-lei, Wakeham, Stuart G., and Summons, Roger E.
- Subjects
- *
SULFUR bacteria , *PHOTOSYNTHETIC bacteria , *LAKE sediments , *GENOMICS , *BACTERIAL communities - Abstract
Anoxygenic phototrophic bacteria (green and purple sulfur bacteria) thrive in anoxic environments where light penetrates a sulfide-containing (euxinic) water column. Genomic data and photosynthetic bacterial carotenoid pigments should provide complementary information on the spatio-temporal dynamics of anoxygenic phototrophs in modern euxinic environments. In turn, these contemporary depositional settings often serve as analogues for ancient counterparts. However, in some modern environments, DNA-informed patterns of phototrophic sulfur bacteria occurrence do not match distributions of their carotenoid inventories. One possible explanation for these seemingly incompatible observations is that the rapid sulfurization of carotenoids and incorporation into macromolecules via multiple carbon–sulfur bonds prevents or confounds their detection by conventional means. Here, to evaluate this conundrum, we revisit some representative contemporary euxinic environments where anoxygenic phototrophic bacteria have mostly been detected based on genomic analyses. Although free intact carotenoids are sporadically detected in surface sediments, their distributions do not reveal a complete picture. Exogenously sourced fossil carotenoids (e.g., paleorenieratane) is an additional complication. Carotenoid inventories obtained by desulfurization with Raney nickel, on the other hand, stand in stark contrast to those present as free lipids. In particular, sulfur-linked carotenoids present in euxinic lake sediments provide a more complete picture of compositions of anoxygenic sulfur bacterial communities and account for discrepancies reported in previous studies. We observe a closer alignment between genomic data and patterns of sulfurized carotenoids and, importantly, our results highlight how sulfurization serves as a pathway for the rapid modification of highly functionalised lipids and their sequestration into the macromolecular component of sediment extracts. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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27. The Impact of the Major Endoribonucleases RNase E and RNase III and of the sRNA StsR on Photosynthesis Gene Expression in Rhodobacter sphaeroides Is Growth-Phase-Dependent.
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Börner, Janek, Grützner, Julian, Gerken, Florian, and Klug, Gabriele
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RHODOBACTER sphaeroides , *PHOTOSYNTHETIC bacteria , *ENDORIBONUCLEASES , *GENETIC transcription regulation , *GENE expression - Abstract
Rhodobacter sphaeroides is a facultative phototrophic bacterium that performs aerobic respiration when oxygen is available. Only when oxygen is present at low concentrations or absent are pigment–protein complexes formed, and anoxygenic photosynthesis generates ATP. The regulation of photosynthesis genes in response to oxygen and light has been investigated for decades, with a focus on the regulation of transcription. However, many studies have also revealed the importance of regulated mRNA processing. This study analyzes the phenotypes of wild type and mutant strains and compares global RNA-seq datasets to elucidate the impact of ribonucleases and the small non-coding RNA StsR on photosynthesis gene expression in Rhodobacter. Most importantly, the results demonstrate that, in particular, the role of ribonuclease E in photosynthesis gene expression is strongly dependent on growth phase. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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28. Towards the discovery of novel molecular clocks in Prokaryotes.
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Géron, Augustin, Werner, Johannes, Wattiez, Ruddy, and Matallana-Surget, Sabine
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MOLECULAR clock , *PROKARYOTES , *CIRCADIAN rhythms , *METHANOTROPHS , *PHOTOSYNTHETIC bacteria , *ARCHAEBACTERIA , *ENVIRONMENTAL sciences - Abstract
Diel cycle is of enormous biological importance as it imposes daily oscillation in environmental conditions, which temporally structures most ecosystems. Organisms developed biological time-keeping mechanisms – circadian clocks – that provide a significant fitness advantage over competitors by optimising the synchronisation of their biological activities. While circadian clocks are ubiquitous in Eukaryotes, they are so far only characterised in Cyanobacteria within Prokaryotes. However, growing evidence suggests that circadian clocks are widespread in the bacterial and archaeal domains. As Prokaryotes are at the heart of crucial environmental processes and are essential to human health, unravelling their time-keeping systems provides numerous applications in medical research, environmental sciences, and biotechnology. In this review, we elaborate on how novel circadian clocks in Prokaryotes offer research and development perspectives. We compare and contrast the different circadian systems in Cyanobacteria and discuss about their evolution and taxonomic distribution. We necessarily provide an updated phylogenetic analysis of bacterial and archaeal species that harbour homologs of the main cyanobacterial clock components. Finally, we elaborate on new potential clock-controlled microorganisms that represent opportunities of ecological and industrial relevance in prokaryotic groups such as anoxygenic photosynthetic bacteria, methanogenic archaea, methanotrophs or sulphate-reducing bacteria. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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29. Living Therapeutics for Synergistic Hydrogen‐Photothermal Cancer Treatment by Photosynthetic Bacteria
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Yingyi Zhang, Xiaolian Deng, Lili Xia, Jianghui Liang, Meng Chen, Xiaoling Xu, Wei Chen, Jianwei Ding, Chengjie Yu, Limei Liu, Yang Xiang, Yiliang Lin, Fangfang Duan, Wei Feng, Yu Chen, and Xiang Gao
- Subjects
hydrogen therapy ,hydrogen‐photothermal therapy ,living bacterial therapies ,photosynthetic bacteria ,Science - Abstract
Abstract Hydrogen gas (H2) therapy, recognized for its inherent biosafety, holds significant promise as an anti‐cancer strategy. However, the efficacy of H2 treatment modalities is compromised by their reliance on systemic gas administration or chemical reactions generation, which suffers from low efficiency, poor targeting, and suboptimal utilization. In this study, living therapeutics are employed using photosynthetic bacteria Rhodobacter sphaeroides for in situ H2 production combined with near‐infrared (NIR) mediated photothermal therapy. Living R. sphaeroides exhibits strong absorption in the NIR spectrum, effectively converting light energy into thermal energy while concurrently generating H2. This dual functionality facilitates the targeted induction of tumor cell death and substantially reduces collateral damage to adjacent normal tissues. The findings reveal that integrating hydrogen therapy with photothermal effects, mediated through photosynthetic bacteria, provides a robust, dual‐modality approach that enhances the overall efficacy of tumor treatments. This living therapeutic strategy not only leverages the therapeutic potential of both hydrogen and photothermal therapeutic modalities but also protects healthy tissues, marking a significant advancement in cancer therapy techniques.
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- 2025
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30. Novel isolates expand the physiological diversity of Prochlorococcus and illuminate its macroevolution
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Jamie W. Becker, Shaul Pollak, Jessie W. Berta-Thompson, Kevin W. Becker, Rogier Braakman, Keven D. Dooley, Thomas Hackl, Allison Coe, Aldo Arellano, Kristen N. LeGault, Paul M. Berube, Steven J. Biller, Andrés Cubillos-Ruiz, Benjamin A. S. Van Mooy, and Sallie W. Chisholm
- Subjects
picocyanobacteria ,evolutionary biology ,marine microbiology ,ecophysiology ,photosynthetic bacteria ,Microbiology ,QR1-502 - Abstract
ABSTRACT Prochlorococcus is a diverse picocyanobacterial genus and the most abundant phototroph on Earth. Its photosynthetic diversity divides it into high-light (HL)- or low-light (LL)-adapted groups representing broad phylogenetic grades—each composed of several monophyletic clades. Here, we physiologically characterize four new Prochlorococcus strains isolated from below the deep chlorophyll maximum in the North Pacific Ocean. We combine these physiological properties with genomic analyses to explore the evolution of photosynthetic antennae and discuss potential macroevolutionary implications. The isolates belong to deeply branching low-light-adapted clades that have no other cultivated representatives and display some unusual characteristics. For example, despite its otherwise low-light-adapted physiological characteristics, strain MIT1223 has low chl b2 content similar to high-light-adapted strains. Isolate genomes revealed that each strain contains a unique arsenal of pigment biosynthesis and binding alleles that have been horizontally acquired, contributing to the observed physiological diversity. Comparative genomic analysis of all picocyanobacteria reveals that Pcb, the major pigment carrying protein in Prochlorococcus, greatly increased in copy number and diversity per genome along a branch that coincides with the loss of facultative particle attachment. Collectively, these observations support a recently developed macroevolutionary model, in which niche-constructing radiations allowed ancestral lineages of picocyanobacteria to transition from a particle-attached to planktonic lifestyle and broadly colonize the euphotic zone.IMPORTANCEThe marine cyanobacterium, Prochlorococcus, is among the Earth’s most abundant organisms, and much of its genetic and physiological diversity remains uncharacterized. Although field studies help reveal the scope of diversity, cultured isolates allow us to link genomic potential to physiological processes, illuminate eco-evolutionary feedbacks, and test theories arising from comparative genomics of wild cells. Here, we report the isolation and characterization of novel low-light (LL)-adapted Prochlorococcus strains that fill in multiple evolutionary gaps. These new strains are the first cultivated representatives of the LLVII and LLVIII paraphyletic grades of Prochlorococcus, which are broadly distributed in the lower regions of the ocean euphotic zone. Each of these grades is a unique, highly diverse section of the Prochlorococcus tree that separates distinct ecological groups: the LLVII grade branches between monophyletic clades that have facultatively particle-associated and constitutively planktonic lifestyles, whereas the LLVIII grade lies along the branch that leads to all high-light (HL)-adapted clades. Characterizing strains and genomes from these grades yields insights into the large-scale evolution of Prochlorococcus. The new LLVII and LLVIII strains are adapted to growth at very low irradiance levels and possess unique light-harvesting gene signatures and pigmentation. The LLVII strains represent the most basal Prochlorococcus group with a major expansion in photosynthetic antenna genes. Furthermore, a strain from the LLVIII grade challenges the paradigm that all LL-adapted Prochlorococcus exhibit high ratios of chl b:a2. These findings provide insights into the photophysiological evolution of Prochlorococcus and redefine what it means to be a low- vs high-light-adapted Prochlorococcus cell.
- Published
- 2024
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31. Cryomicroneedle delivery of nanogold-engineered Rhodospirillum rubrum for photochemical transformation and tumor optical biotherapy
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Qingxia Shi, Ting Yin, Cuiping Zeng, Hong Pan, Ze Chen, Lin Wang, Bo Wang, Mingbin Zheng, and Lintao Cai
- Subjects
Cryomicroneedles ,Photosynthetic bacteria ,Lactate depletion ,Hydrogen generation ,Optical biotherapy ,Materials of engineering and construction. Mechanics of materials ,TA401-492 ,Biology (General) ,QH301-705.5 - Abstract
Tumor metabolite regulation is intricately linked to cancer progression. Because lactate is a characteristic metabolite of the tumor microenvironment (TME), it supports tumor progression and drives immunosuppression. In this study, we presented a strategy for antitumor therapy by developing a nanogold-engineered Rhodospirillum rubrum (R.r-Au) that consumed lactate and produced hydrogen for optical biotherapy. We leveraged a cryogenic micromolding approach to construct a transdermal therapeutic cryomicroneedles (CryoMNs) patch integrated with R.r-Au to efficiently deliver living bacterial drugs. Our long-term storage studies revealed that the viability of R.r-Au in CryoMNs remained above 90%. We found that the CryoMNs patch was mechanically strong and could be inserted into mouse skin. In addition, it rapidly dissolved after administering bacterial drugs and did not produce by-products. Under laser irradiation, R.r-Au effectively enhanced electron transfer through Au NPs actuation into the photosynthetic system of R. rubrum and enlarged lactate consumption and hydrogen production, thus leading to an improved tumor immune activation. Our study demonstrated the potential of CryoMNs-R.r-Au patch as a minimally invasive in situ delivery approach for living bacterial drugs. This research opens up new avenues for nanoengineering bacteria to transform tumor metabolites into effective substances for tumor optical biotherapy.
- Published
- 2024
- Full Text
- View/download PDF
32. Photosynthetic bacteria-based whole-cell inorganic-biohybrid system for multimodal enhanced tumor radiotherapy
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Shiyuan Hua, Jun Zhao, Lin Li, Chaoyi Liu, Lihui Zhou, Kun Li, Quan Huang, Min Zhou, and Kai Wang
- Subjects
Photosynthetic bacteria ,Whole-cell inorganic-biohybrid system ,Gold nanocluster ,Type I photochemical mechanism ,Radiotherapy ,Biotechnology ,TP248.13-248.65 ,Medical technology ,R855-855.5 - Abstract
Abstract The whole-cell inorganic-biohybrid systems show special functions and wide potential in biomedical application owing to the exceptional interactions between microbes and inorganic materials. However, the hybrid systems are still in stage of proof of concept. Here, we report a whole-cell inorganic-biohybrid system composed of Spirulina platensis and gold nanoclusters (SP-Au), which can enhance the cancer radiotherapy through multiple pathways, including cascade photocatalysis. Such systems can first produce oxygen under light irradiation, then convert some of the oxygen to superoxide anion (•O2 −), and further oxidize the glutathione (GSH) in tumor cells. With the combination of hypoxic regulation, •O2 − production, GSH oxidation, and the radiotherapy sensitization of gold nanoclusters, the final radiation is effectively enhanced, which show the best antitumor efficacy than other groups in both 4T1 and A549 tumor models. Moreover, in vivo distribution experiments show that the SP-Au can accumulate in the tumor and be rapidly metabolized through biodegradation, further indicating its application potential as a new multiway enhanced radiotherapy sensitizer.
- Published
- 2024
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33. Tailoring therapeutics via a systematic beneficial elements comparison between photosynthetic bacteria-derived OMVs and extruded nanovesicles
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Tingshan Xiao, Yichuan Ma, Ziyang Zhang, Yixin Zhang, Yu Zhao, Xiaohan Zhou, Xueyi Wang, Kun Ge, Junshu Guo, Jinchao Zhang, Zhenhua Li, and Huifang Liu
- Subjects
Photosynthetic bacteria ,Outer membrane vesicles ,Bacteria-derived nanovesicles ,Antitumor ,Lysophosphatidylcholine ,Materials of engineering and construction. Mechanics of materials ,TA401-492 ,Biology (General) ,QH301-705.5 - Abstract
Photosynthetic bacteria (PSB) has shown significant potential as a drug or drug delivery system owing to their photothermal capabilities and antioxidant properties. Nevertheless, the actualization of their potential is impeded by inherent constraints, including their considerable size, heightened immunogenicity and compromised biosafety. Conquering these obstacles and pursuing more effective solutions remains a top priority. Similar to extracellular vesicles, bacterial outer membrane vesicles (OMVs) have demonstrated a great potential in biomedical applications. OMVs from PSB encapsulate a rich array of bioactive constituents, including proteins, nucleic acids, and lipids inherited from their parent cells. Consequently, they emerge as a promising and practical alternative. Unfortunately, OMVs have suffered from low yield and inconsistent particle sizes. In response, bacteria-derived nanovesicles (BNVs), created through controlled extrusion, adeptly overcome the challenges associated with OMVs. However, the differences, both in composition and subsequent biological effects, between OMVs and BNVs remain enigmatic. In a groundbreaking endeavor, our study meticulously cultivates PSB-derived OMVs and BNVs, dissecting their nuances. Despite minimal differences in morphology and size between PSB-derived OMVs and BNVs, the latter contains a higher concentration of active ingredients and metabolites. Particularly noteworthy is the elevated levels of lysophosphatidylcholine (LPC) found in BNVs, known for its ability to enhance cell proliferation and initiate downstream signaling pathways that promote angiogenesis and epithelialization. Importantly, our results indicate that BNVs can accelerate wound closure more effectively by orchestrating a harmonious balance of cell proliferation and migration within NIH-3T3 cells, while also activating the EGFR/AKT/PI3K pathway. In contrast, OMVs have a pronounced aptitude in anti-cancer efforts, driving macrophages toward the M1 phenotype and promoting the release of inflammatory cytokines. Thus, our findings not only provide a promising methodological framework but also establish a definitive criterion for discerning the optimal application of OMVs and BNVs in addressing a wide range of medical conditions.
- Published
- 2024
- Full Text
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34. Multi-scale modelling of biohydrogen production in closed photobioreactors
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Anye Cho, Bovinille, Smith, Robin, and Zhang, Dongda
- Subjects
Photosynthetic bacteria ,Cyanobacteria ,Microalgae ,Optimisation and upscaling ,Photobioreactors ,Computational Fluid Dynamics (CFD) ,Mathematical modelling ,Biohydrogen ,Biokinetics - Abstract
The synthesis of bio-based products, fuels, and materials in large-scale closed-photobioreactors (PBRs) presents a sustainable option for tackling the ever-increasing mass and energy demands of the world's rapidly growing population. With the scale-up of production comes significant cost reductions and increased commercial viability. However, successful PBR scale-up must overcome key hurdles relating to the local environmental conditions, including uneven light distribution caused by cellular absorption and mutual shading, as well as nutrient and biohydrogen partial pressure gradients. Therefore, this thesis confronts these engineering challenges with advanced mathematical modelling techniques by tackling the biotechnology's multi-scale complexities with minimum simulation cost strategies. The proposed models were thoroughly validated using both literature and experimental data collected from cultivating different microbial species in PBRs of different configurations and scales. In a "journal format" style thesis, Chapters 1 to 2 covers the general introduction and comprehensive literature review whereas Chapters 3 to 5 present the published original contributions. More specifically, Chapter 3 proposes the first-ever mechanistic model to directly integrate the effect of PBR mixing-induced light/dark cycles into the biomass growth kinetics. This enables the manipulation of the PBR mixing rate to alleviate light attenuation challenges and maintain higher biomass growth rates. Chapter 4 extends the mechanistic model's capabilities to account for the effects of temperature and PBR biohydrogen partial pressure, which were previously ununified for any microbial species. To evaluate the biotechnological transfer across two types of PBR, namely the Schott bottle-based and vertical tubular-based PBR, two parameters related to the PBR's local environmental conditions were derived: the effective light coefficient and the biohydrogen enhancement coefficient for recalibration. The successful systematic upscaling approach was recommended for other similar biosystems. Building on these achievements, Chapter 5 focuses on the multi-physics coupling within a Computational Fluid Dynamics (CFD) solver to facilitate optimisation and upscaling of biohydrogen production. For this, accelerated growth kinetics and parallel computing were combined to greatly reduce the simulation cost, enabling uncertainty estimation via Monte Carlo simulation for the first time. Finally, Chapter 6 concludes the thesis and presents two future directions: the exploitation of the models developed in Chapters 3 and 5 for (i) model-based optimal control of PBR mixing, (ii) the optimisation of PBR static mixers to enhance biomass growth and biohydrogen productivity, and (iii) application to other scalable PBR configurations.
- Published
- 2023
35. Anoxygenic photosynthesis with emphasis on green sulfur bacteria and a perspective for hydrogen sulfide detoxification of anoxic environments.
- Author
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Kushkevych, Ivan, Procházka, Vít, Vítězová, Monika, Dordević, Dani, El-Salam, Mohamed Abd, and Rittmann, Simon K.-M. R.
- Subjects
HYDROGEN sulfide ,SULFUR bacteria ,KREBS cycle ,PHOTOSYNTHESIS ,PHOTOSYNTHETIC bacteria ,PHOTOSYNTHETIC pigments ,ELECTRON donors ,ELECTRON sources - Abstract
The bacterial light-dependent energy metabolism can be divided into two types: oxygenic and anoxygenic photosynthesis. Bacterial oxygenic photosynthesis is similar to plants and is characteristic for cyanobacteria. Bacterial anoxygenic photosynthesis is performed by anoxygenic phototrophs, especially green sulfur bacteria (GSB; family Chlorobiaceae) and purple sulfur bacteria (PSB; family Chromatiaceae). In anoxygenic photosynthesis, hydrogen sulfide ( H
2 S) is used as the main electron donor, which differs from plants or cyanobacteria where water is the main source of electrons. This review mainly focuses on the microbiology of GSB, which may be found in water or soil ecosystems where H2 S is abundant. GSB oxidize H2 S to elemental sulfur. GSB possess special structures—chlorosomes—wherein photosynthetic pigments are located. Chlorosomes are vesicles that are surrounded by a lipid monolayer that serve as light-collecting antennas. The carbon source of GSB is carbon dioxide, which is assimilated through the reverse tricarboxylic acid cycle. Our review provides a thorough introduction to the comparative eco-physiology of GSB and discusses selected application possibilities of anoxygenic phototrophs in the fields of environmental management, bioremediation, and biotechnology. [ABSTRACT FROM AUTHOR]- Published
- 2024
- Full Text
- View/download PDF
36. Photosynthetic Bacteria‐Hitchhiking 2D iMXene‐mRNA Vaccine to Enable Photo‐Immunogene Cancer Therapy.
- Author
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Zhang, Shen, Yu, Jifeng, Liu, Yunyun, Xiong, Bing, Fang, Yan, Zhu, Yuli, Li, Shaoyue, Sun, Liping, Zhou, Boyang, Sun, Yikang, Wang, Lifan, Yue, Wenwen, Yin, Haohao, and Xu, Huixiong
- Subjects
- *
CANCER treatment , *NEPHROBLASTOMA , *CANCER vaccines , *PHOTOSYNTHETIC bacteria , *VACCINES - Abstract
Therapeutic mRNA vaccines have become powerful therapeutic tools for severe diseases, including infectious diseases and malignant neoplasms. mRNA vaccines encoding tumor‐associated antigens provide unprecedented hope for many immunotherapies that have hit the bottleneck. However, the application of mRNA vaccines is limited because of biological instability, innate immunogenicity, and ineffective delivery in vivo. This study aims to construct a novel mRNA vaccine delivery nanosystem to successfully co‐deliver a tumor‐associated antigen (TAA) encoded by the Wilms' tumor 1 (WT1) mRNA. In this system, named PSB@Nb1.33C/mRNA, photosynthetic bacteria (PSB) efficiently delivers the iMXene‐WT1 mRNA to the core tumor region using photo‐driven and hypoxia‐driven properties. The excellent photothermal therapeutic (PTT) properties of PSB and 2D iMxene (Nb1.33C) trigger tumor immunogenic cell death, which boosts the release of the WT1 mRNA. The released WT1 mRNA is translated, presenting the TAA and amplifying immune effect in vivo. The designed therapeutic strategy demonstrates an excellent ability to inhibit distant tumors and counteract postsurgical lung metastasis. Thus, this study provides an innovative and effective paradigm for tumor immunotherapy, i.e., photo‐immunogene cancer therapy, and establishes an efficient delivery platform for mRNA vaccines, thereby opening a new path for the wide application of mRNA vaccines. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
37. Advances in the application of gas vesicles in medical imaging and disease treatment.
- Author
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Feng, Renjie, Lan, Jie, Goh, Meei Chyn, Du, Meng, and Chen, Zhiyi
- Subjects
- *
THERAPEUTICS , *DIAGNOSTIC imaging , *PHOTOSYNTHETIC bacteria , *CONTRAST media , *NANOPARTICLES , *ARCHAEBACTERIA - Abstract
The gas vesicle (GV) is like a hollow nanoparticle consisting of an internal gas and a protein shell, which mainly consists of hydrophobic gas vesicle protein A (GvpA) and GvpC attached to the surface. GVs, first discovered in cyanobacteria, are mainly produced by photosynthetic bacteria (PSB) and halophilic archaea. After being modified and engineered, GVs can be utilized as contrast agents, delivery carriers, and immunological boosters for disease prevention, diagnosis, and treatment with good results due to their tiny size, strong stability and non-toxicity advantages. Many diagnostic and therapeutic approaches based on GV are currently under development. In this review, we discuss the source, function, physical and chemical properties of GV, focus on the current application progress of GV, and put forward the possible application prospect and development direction of GV in the future. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
38. Chassis engineering for high light tolerance in microalgae and cyanobacteria.
- Author
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Dou, Biyun, Li, Yang, Wang, Fangzhong, Chen, Lei, and Zhang, Weiwen
- Subjects
- *
MICROALGAE , *DUNALIELLA , *RENEWABLE energy transition (Government policy) , *CYANOBACTERIA , *ELECTRON transport , *PHOTOSYNTHETIC bacteria , *ENGINEERING - Abstract
AbstractOxygenic photosynthesis in microalgae and cyanobacteria is considered an important chassis to accelerate energy transition and mitigate global warming. Currently, cultivation systems for photosynthetic microbes for large-scale applications encountered excessive light exposure stress. High light stress can: affect photosynthetic efficiency, reduce productivity, limit cell growth, and even cause cell death. Deciphering photoprotection mechanisms and constructing high-light tolerant chassis have been recent research focuses. In this review, we first briefly introduce the self-protection mechanisms of common microalgae and cyanobacteria in response to high light stress. These mechanisms mainly include: avoiding excess light absorption, dissipating excess excitation energy, quenching excessive high-energy electrons, ROS detoxification, and PSII repair. We focus on the species-specific differences in these mechanisms as well as recent advancements. Then, we review engineering strategies for creating high-light tolerant chassis, such as: reducing the size of the light-harvesting antenna, optimizing non-photochemical quenching, optimizing photosynthetic electron transport, and enhancing PSII repair. Finally, we propose a comprehensive exploration of mechanisms: underlying identified high light tolerant chassis, identification of new genes pertinent to high light tolerance using innovative methodologies, harnessing CRISPR systems and artificial intelligence for chassis engineering modification, and introducing plant photoprotection mechanisms as future research directions. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
39. Underwater light source changes nitrogen and phosphorus removal pathways by Vallisneria spinulosa Yan growth system.
- Author
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Zhao, Jinshan, Zhou, Xiaolin, Fan, Chunzhen, Wang, Zhiquan, Jin, Zhan, Bei, Ke, Zheng, Xiangyong, Zhao, Min, and Wu, Suqing
- Subjects
LIGHT sources ,VALLISNERIA ,NITRIFYING bacteria ,WATER purification ,DENITRIFYING bacteria ,PHOTOSYNTHETIC bacteria ,BODIES of water - Abstract
Vallisneria spinulosa Yan (V.spinulosa Yan) with good ability of water purification is often used for ecological restoration of polluted water bodies. However, it is difficult to survive in turbid water bodies due to the low lighting condition. This study explored the feasibility of introducing artificial underwater light source into water bodies with high turbidity to strengthen the water restoration by V.spinulosa Yan. Addition of underwater light source promoted the clonal reproduction ability of V.spinulosa Yan, thus enhancing the removal loads of total nitrogen (TN), total phosphorus (TP), and nitrate nitrogen ( NO 3 − - N ) by 1.60–3.43 × 10
−2 , 1.49–3.49 × 10−3 , and 0.80–2.06 × 10−2 g m−2 d−1 , respectively. Underwater light source significantly reduced the abundance of microbial community on V.spinulosa Yan leaves, as well as most nitrifying bacteria (Nitrosomonadaceae) and denitrifying bacteria (Nitrospira, Comamonadaceae, and Rhodocyclaceae) in the system. But the attachment of some Cyanophyta (Chloroplast and Cyanobacteria) and Photosynthetic bacteria (Rhodobacter) onto the leaves and the growth of Methyloligellaceae in water and sediments were promoted. Nitrogen and phosphorus removal by the growth system of V.spinulosa Yan without underwater light source mainly depended on the biological processes by functional bacteria, while the absorption and co-assimilation effect of V.spinulosa Yan with underwater light source. [ABSTRACT FROM AUTHOR]- Published
- 2024
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40. Contributions of David Mauzerall to photosynthesis research - celebrating his 95th birthday.
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GOVINDJEE, G., CANAANI, O., CELLARIUS, R. A., DINER, B., GREENBAUM, E., HOU, H. J. M., KIANG, N. Y., LINDSEY, J. S., MAUZERALL, D. L., MAUZERALL, M. E., SEIBERT, M., and STIRBET, A.
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CHEMICAL energy , *PHOTOSYNTHETIC bacteria , *PHOTOBIOLOGY , *CHLOROPHYLL spectra , *ORIGIN of life - Abstract
We honor here Professor David Mauzerall, a pioneer in the fields of photochemistry and photobiology of porphyrins and chlorophylls in vitro and in vivo, on the occasion of his 95th birthday. Throughout his career at The Rockefeller University, he refined our understanding of how chlorophyll converts light energy into chemical energy. He exploited top-of-the-line laser technology in developing photoacoustics and a variety of other innovative experimental approaches. His experimental work and conceptual insights contributed greatly to our understanding of photosynthesis and the possible role of photosynthesis in the origin of life. His contributions include many landmark single-authored and collaborative papers, and his legacy includes the training of others who have become authorities themselves. After providing a brief description of his research accomplishments, we include tributes from several of his coworkers and his daughters highlighting their valuable experiences with David Mauzerall on this milestone birthday. [ABSTRACT FROM AUTHOR]
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- 2024
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41. Response of aerobic anoxygenic phototrophic bacteria to limitation and availability of organic carbon.
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Piwosz, Kasia, Villena-Alemany, Cristian, Całkiewicz, Joanna, Mujakić, Izabela, Náhlík, Vít, Dean, Jason, and Koblížek, Michal
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PHOTOSYNTHETIC bacteria , *HETEROTROPHIC bacteria , *NEAR infrared radiation , *LAKES , *BIOTIC communities - Abstract
Aerobic anoxygenic phototrophic (AAP) bacteria are an important component of freshwater bacterioplankton. They can support their heterotrophic metabolism with energy from light, enhancing their growth efficiency. Based on results from cultures, it was hypothesized that photoheterotrophy provides an advantage under carbon limitation and facilitates access to recalcitrant or low-energy carbon sources. However, verification of these hypotheses for natural AAP communities has been lacking. Here, we conducted whole community manipulation experiments and compared the growth of AAP bacteria under carbon limited and with recalcitrant or low-energy carbon sources under dark and light (near-infrared light, λ > 800 nm) conditions to elucidate how they profit from photoheterotrophy. We found that AAP bacteria induce photoheterotrophic metabolism under carbon limitation, but they overcompete heterotrophic bacteria when carbon is available. This effect seems to be driven by physiological responses rather than changes at the community level. Interestingly, recalcitrant (lignin) or low-energy (acetate) carbon sources inhibited the growth of AAP bacteria, especially in light. This unexpected observation may have ecosystem-level consequences as lake browning continues. In general, our findings contribute to the understanding of the dynamics of AAP bacteria in pelagic environments. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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42. Study on Calibration Method for the Count of Living Algal Cells Detection Based on Variable Fluorescence in Ballast Water.
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Hu, Li, Hua, Hui, Yin, Gaofang, Liang, Tianhong, and Zhao, Nanjing
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ALGAL cells , *BALLAST water , *FLUORESCENCE yield , *FLUORESCENCE , *CHLORELLA pyrenoidosa , *PHOTOSYNTHETIC bacteria , *ALGAE - Abstract
In the monitoring the discharge of ballast water, the count of living algal cells is of utmost significant. Variable fluorescence, denoted as Fv, stands as an optimal parameter for photosynthetic fluorescence, efficiently charactering the living algal cells count, unaffected by the ballast waters' complex background fluorescence environment. This study deeply investigates the quantitative relationship between Fv and the count of living algal cells. Observations indicate that single cell fluorescence yield (abbreviated as SCF) varies significantly across different algae species, leading to considerable errors in quantifying living algal cell count in ballast water with unknown components using the calibration relationship between Fv and the cell count. Thus, correcting SCF prior to calibration becomes necessary. The paper proposes an innovative SCF correction method based on cell cross-sectional area and an eμ factor (where μ is the expected value of the functional absorption cross-section of PSII) This method mitigates the influence of cell size and species differences on quantifying the living algal cell count. Correction operation trials revealed that dividing the SCF measurement by cell cross-sectional area and multiplying by eμ enhanced the correction effect. Comparative experiments demonstrated marked improvement: Relative errors (REs) for Chlorella pyrenoidosa and Chlorella marine, both belonging to the Chlorophyta group, fell from 92.1% and 90.6% to 37.2% and 9.5% respectively post-correction. Similarly, REs for Thalassiosira weissflogii and Nitzschia closterium minutissima, from the Bacillariophyta group, decreased from 74.7% and 68.1% to 14.3% and 19.1% respectively. The RE of Peridinium from the Pyrrophyta group dropped from 28.4% to 12.1%. The results underscore the effectiveness of cell cross-sectional area and eμ in correcting SCF, thus offering a novel correction method for swift and precise measurement of living algal cell count in ballast water, based on variable fluorescence. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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43. The Role of FtsH Complexes in the Response to Abiotic Stress in Cyanobacteria.
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Krynická, Vendula and Komenda, Josef
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HETEROTROPHIC bacteria , *MEMBRANE proteins , *DEFICIENCY diseases , *ABIOTIC stress , *VIRUS diseases , *HEAT shock proteins , *PHOTOSYNTHETIC bacteria - Abstract
FtsH proteases (FtsHs) belong to intramembrane ATP-dependent metalloproteases which are widely distributed in eubacteria, mitochondria and chloroplasts. The best-studied roles of FtsH in Escherichia coli include quality control of membrane proteins, regulation of response to heat shock, superoxide stress and viral infection, and control of lipopolysaccharide biosynthesis. While heterotrophic bacteria mostly contain a single indispensable FtsH complex, photosynthetic cyanobacteria usually contain three FtsH complexes: two heterocomplexes and one homocomplex. The essential cytoplasmic FtsH1/3 most probably fulfills a role similar to other bacterial FtsHs, whereas the thylakoid FtsH2/3 heterocomplex and FtsH4 homocomplex appear to maintain the photosynthetic apparatus of cyanobacteria and optimize its functionality. Moreover, recent studies suggest the involvement of all FtsH proteases in a complex response to nutrient stresses. In this review, we aim to comprehensively evaluate the functions of the cyanobacterial FtsHs specifically under stress conditions with emphasis on nutrient deficiency and high irradiance. We also point to various unresolved issues concerning FtsH functions, which deserve further attention. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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44. Coexistence of nonfluorescent chromoproteins and fluorescent proteins in massive Porites spp. corals manifesting a pink pigmentation response.
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Suzuki, Toshiyuki, Casareto, Beatriz E., Yucharoen, Mathinee, Dohra, Hideo, and Suzuki, Yoshimi
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FLUORESCENT proteins ,PORITES ,LIQUID chromatography-mass spectrometry ,CORALS ,DENTAL discoloration ,CORAL colonies ,PHOTOSYNTHETIC bacteria - Abstract
Introduction: Several fluorescent proteins (FPs) and chromoproteins (CPs) are present in anthozoans and play possible roles in photoprotection. Coral tissues in massive corals often display discoloration accompanied by inflammation. Incidences of the pink pigmentation response (PPR) in massive Porites, described as inflammatory pink lesions of different shapes and sizes, has recently increased worldwide. FPs are reported to be present in PPR lesions, wherein a red fluorescent protein (RFP) appears to play a role in reducing reactive oxygen species. However, to date, the biochemical characterization and possible roles of the pigments involved are poorly understood. The present study aimed to identify and characterize the proteins responsible for pink discoloration in massive Porites colonies displaying PPRs, as well as to assess the differential distribution of pigments and the antioxidant properties of pigmented areas. Method: CPs were extracted from PPR lesions using gel-filtration chromatography and identified via genetic analysis using liquid chromatography-tandem mass spectrometry. The coexistence of CPs and RFP in coral tissues was assessed using microscopic observation. Photosynthetic antivity and hydrogen peroxide-scavenging activitiy were measured to assess coral stress conditions. Results: The present study revealed that the same CP (plut2.m8.16902.m1) isolated from massive Porites was present in both the pink spot and patch morphologies of the PPR. CPs were also found to coexist with RFP in coral tissues that manifested a PPR, with a differential distribution (coenosarc or tip of polyps’ tentacles). High hydrogen peroxide-scavenging rates were found in tissues affected by PPR. Discussion and Conclusion: The coexistence of CPs and RFP suggests their possible differential role in coral immunity. CPs, which are specifically expressed in PPR lesions, may serve as an antioxidant in the affected coral tissue. Overall, this study provides new knowledge to our understanding of the role of CPs in coral immunity. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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45. Photosynthetic bacteria-based whole-cell inorganic-biohybrid system for multimodal enhanced tumor radiotherapy.
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Hua, Shiyuan, Zhao, Jun, Li, Lin, Liu, Chaoyi, Zhou, Lihui, Li, Kun, Huang, Quan, Zhou, Min, and Wang, Kai
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- *
GOLD clusters , *PHOTOSYNTHETIC bacteria , *SPIRULINA platensis , *RADIOTHERAPY , *RADIATION-sensitizing agents , *SPECIAL functions , *GADOLINIUM , *REACTIVE oxygen species - Abstract
The whole-cell inorganic-biohybrid systems show special functions and wide potential in biomedical application owing to the exceptional interactions between microbes and inorganic materials. However, the hybrid systems are still in stage of proof of concept. Here, we report a whole-cell inorganic-biohybrid system composed of Spirulina platensis and gold nanoclusters (SP-Au), which can enhance the cancer radiotherapy through multiple pathways, including cascade photocatalysis. Such systems can first produce oxygen under light irradiation, then convert some of the oxygen to superoxide anion (•O2−), and further oxidize the glutathione (GSH) in tumor cells. With the combination of hypoxic regulation, •O2− production, GSH oxidation, and the radiotherapy sensitization of gold nanoclusters, the final radiation is effectively enhanced, which show the best antitumor efficacy than other groups in both 4T1 and A549 tumor models. Moreover, in vivo distribution experiments show that the SP-Au can accumulate in the tumor and be rapidly metabolized through biodegradation, further indicating its application potential as a new multiway enhanced radiotherapy sensitizer. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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46. Rhodopin Incorporated into the Allochromatium vinosum LH2 Complex Is Able to Generate Singlet Oxygen under Illumination.
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Makhneva, Z. K., Bolshakov, M. A., Ashikhmin, A. A., and Moskalenko, A. A.
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REACTIVE oxygen species , *CAROTENOIDS , *DIPHENYLAMINE , *LIGHTING , *THERMAL stability , *BIOSYNTHESIS - Abstract
DPA membranes from Allochromatium vinosum cells, in which carotenoid biosynthesis was inhibited using diphenylamine (DPA) were obtained, into which rhodopin was incorporated. The LH2 complex with rhodopin content of 85% was isolated. Using a test for the thermal stability of LH2 complexes (DPA and with incorporated rhodopin), it was established that carotenoids of the early stages of biosynthesis (≤1 molecules per complex) did not interfere with rhodopin incorporation. It was found that when the LH2 complex with incorporated rhodopin was irradiated with light at the wavelength of 502 nm, BChl850 was photobleached at a rate close to that in the control LH2 complex. This indicates that rhodopin, after being incorporated into the DPA LH2 complex, is capable of generating singlet oxygen under illumination. Previously obtained data on heterogeneity of the carotenoid composition in DPA LH2 complexes (variation in the number of individual carotenoids molecules per complex in the general population) and our earlier suggestion about the structural role of carotenoids, namely, their ability to stabilize the LH2 complexes, were confirmed. Based on analysis of our results, as well as of the literature data, the interaction of singlet oxygen and carotenoids is discussed. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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47. Present Understanding of Biodiversity of Anoxygenic Phototrophic Bacteria in the Relic Lake Mogilnoe (Kildin Island, Murmansk Oblast, Russia).
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Gorlenko, V. M., Lunina, O. N., Grouzdev, D. S., Krasnova, E. D., Voronov, D. A., Belenkova, V. V., Kozyaeva, V. V., and Savvichev, A. S.
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PHOTOSYNTHETIC bacteria , *WATER sampling , *WATER salinization , *SULFUR bacteria , *LAKES , *ANAEROBIC bacteria - Abstract
The relic Lake Mogilnoe, separated from the Barents Sea by a sand and pebble dam, is located in the high Arctic on the Kildin island (Murmansk region). This lake is a classic example of a meromictic basin of marine origin. The data obtained during the 2018 expedition showed changes in the hydrochemical regime of the lake that have occurred over the past 20 years. Sulfide concentration in the monimolimnion of the lake was as high as 140 mg/L. A tendency for salinization of the surface waters to 7 g/L has been noted. The Lake Mogilnoe is characterized by a discrepancy between the halocline and thermocline levels. The chemocline zone in the lake is below the halocline level. In a narrow oxygen-containing layer between 3 and 7.5 m, aerobic microflora of the marine type and marine fauna were present. The bacterial plate was formed at the boundary of the sulfide layer at ~8 m and mainly consisted of green sulfur bacteria (GSB). Brown-colored GSB species containing bacteriochlorophyll e were predominant. The previously formed concept of anaerobic phototrophic bacteria (APB) biodiversity based on morphological characteristics was modified using metagenomic data obtained by analyzing DNA from two samples of lake water in the chemocline zone, and was also supplemented by identifying new GSB species. Molecular diagnostic data confirmed the absolute dominance of the brackish species of GSB Chlorobium phaeovibrioides. This is the first isolation and identification of brown- and green-colored Prosthecochloris aestuarii morphotypes from Lake Mogilnoe, as well as of bacteriochlorophyll c-containing Prosthecochloris sp. The taxonomic position of Pelodyction phaem, which was constantly present in the Lake Mogilnoe, is discussed in detail. Despite the partial isolation of the ecosystem of Lake Mogilnoe from the Barents Sea, the main properties of the dominant GSB species and Prosthecochlori aestuarii turned out to be similar to those of the phylotypes living in lakes on the White Sea coast. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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48. Evidence of a putative CO2 delivery system to the chromatophore in the photosynthetic amoeba Paulinella.
- Author
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Gabr, Arwa, Stephens, Timothy G., Reinfelder, John R., Liau, Pinky, Calatrava, Victoria, Grossman, Arthur R., and Bhattacharya, Debashish
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CALVIN cycle , *AMOEBA , *CARBONIC anhydrase , *ENDOSYMBIOSIS , *CARBON dioxide , *PHOTOSYNTHETIC bacteria - Abstract
The photosynthetic amoeba, Paulinella provides a recent (ca. 120 Mya) example of primary plastid endosymbiosis. Given the extensive data demonstrating host lineage‐driven endosymbiont integration, we analysed nuclear genome and transcriptome data to investigate mechanisms that may have evolved in Paulinella micropora KR01 (hereinafter, KR01) to maintain photosynthetic function in the novel organelle, the chromatophore. The chromatophore is of α‐cyanobacterial provenance and has undergone massive gene loss due to Muller's ratchet, but still retains genes that encode the ancestral α‐carboxysome and the shell carbonic anhydrase, two critical components of the biophysical CO2 concentrating mechanism (CCM) in cyanobacteria. We identified KR01 nuclear genes potentially involved in the CCM that arose via duplication and divergence and are upregulated in response to high light and downregulated under elevated CO2. We speculate that these genes may comprise a novel CO2 delivery system (i.e., a biochemical CCM) to promote the turnover of the RuBisCO carboxylation reaction and counteract photorespiration. We posit that KR01 has an inefficient photorespiratory system that cannot fully recycle the C2 product of RuBisCO oxygenation back to the Calvin‐Benson cycle. Nonetheless, both these systems appear to be sufficient to allow Paulinella to persist in environments dominated by faster‐growing phototrophs. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
49. Heterotrophic bacteria trigger transcriptome remodelling in the photosynthetic picoeukaryote Micromonas commoda.
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Hamilton, Maria, Ferrer‐González, Frank Xavier, and Moran, Mary Ann
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MARINE bacteria , *GENE expression , *CARBON fixation , *BACTERIAL physiology , *BIOGEOCHEMICAL cycles , *PHOTOSYNTHETIC bacteria , *HETEROTROPHIC bacteria - Abstract
Marine biogeochemical cycles are built on interactions between surface ocean microbes, particularly those connecting phytoplankton primary producers to heterotrophic bacteria. Details of these associations are not well understood, especially in the case of direct influences of bacteria on phytoplankton physiology. Here we catalogue how the presence of three marine bacteria (Ruegeria pomeroyi DSS‐3, Stenotrophomonas sp. SKA14 and Polaribacter dokdonensis MED152) individually and uniquely impact gene expression of the picoeukaryotic alga Micromonas commoda RCC 299. We find a dramatic transcriptomic remodelling by M. commoda after 8 h in co‐culture, followed by an increase in cell numbers by 56 h compared with the axenic cultures. Some aspects of the algal transcriptomic response are conserved across all three bacterial co‐cultures, including an unexpected reduction in relative expression of photosynthesis and carbon fixation pathways. Expression differences restricted to a single bacterium are also observed, with the Flavobacteriia P. dokdonensis uniquely eliciting changes in relative expression of algal genes involved in biotin biosynthesis and the acquisition and assimilation of nitrogen. This study reveals that M. commoda has rapid and extensive responses to heterotrophic bacteria in ways that are generalizable, as well as in a taxon specific manner, with implications for the diversity of phytoplankton‐bacteria interactions ongoing in the surface ocean. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
50. 全面供光策略调控废水培养光合细菌产单细胞蛋白.
- Author
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王晓丹, 卢海凤, 张光明, 司哺春, 卞含笑, 唐 帅, 蒋伟忠, and 李保明
- Abstract
New protein resources can be developed to alleviate the shortage of protein in the feed industry. Photosynthetic bacteria (PSB) can serve as unique microbial protein sources. Among them, the light environment is a crucial influencing factor in the growth and metabolism of PSB. In this study, the light supply strategies were employed to enhance the growth of Rhodopseudomonas palustris (R. palustris) and the synthesis of single-cell protein (SCP) in the wastewater resource systems of PSB. Additionally, a systematic analysis was made on the correlations between substance synthesis and pollutant degradation under different light supply strategies. The results indicated that a full spectrum of light was more conducive to the accumulation of biomass and protein concentration in R. palustris, compared with the segmented spectra. Under incandescent lamp and white LED irradiation, the highest biomass concentration, daily bacterial production, bacterial yield, and protein concentration reached (1 023.18±201.17) mg/L, (0.32±0.10) g/(L·d), (0.31±0.03) mg/mg and (555.66±9.18) mg/L, respectively. These values increased by 37.26%-43.79%, 108.82%-137.92%, 42.01%-91.85%, and 24.77%-33.47%, respectively, compared with the blue and green light groups (P<0.05). Moderate light intensity was favored to accumulate biomass and protein concentration, while excessive or low intensity was detrimental to the accumulation of high-value products by R. palustris. Specifically, under a light intensity of 120 μmol/(m² ·s), the highest biomass concentration, daily bacterial production, bacterial yield, and protein concentration reached (1 646.12±2.47) mg/L, (0.77±0.01) g/(L·d), (0.44±0.05) mg/mg and (803.59±2.62) mg/L, respectively. There was an increase of 60.23%-140.19% in biomass and an increase of 61.90%-94.18% in protein concentration, compared with the 0 μmol/(m² ·s) (control) and 240 μmol/(m² ·s) groups (P<0.05). Intermittent light exhibited significant advantages over continuous light. An appropriate light cycle was selected to significantly promote the growth and protein synthesis of R. palustris. In the condition of 18 L/6 D, the highest biomass concentration, daily bacterial production, protein concentration, and nitrogen conversion efficiency reached (1 140.56±19.72) mg/L, (0.32±0.02) g/(L·d), (506.53±48.20) mg/L, and (1.77±0.35) mg/mg, respectively. There were increases by 17.06%-93.21%, 54.43%-299.93%, 24.35%-43.88% and 38.78%, respectively, compared with the 3 L/21 D and 9 L/15 D groups (P<0.05). The 3 L/21 D group exhibited the highest protein content at 67.47%, indicating an increase of 21.96%-44.54%, compared with all the other experimental groups (P<0.05). Additionally, under conditions of incandescent light, the light intensity of 120 μmol/(m² ·s) and photoperiod of 18 L/6 D, COD and NH4+ -N removal efficiencies reached 72.03%-78.40%. Furthermore, there were significant negative correlations between light intensity and spectrum with the protein content and concentration. Conversely, the photoperiod shared a significant positive correlation with protein concentration. Therefore, the photoperiod can be expected to enhance the production of SCP by R. palustris. Its mechanism involves the direct regulation of PSB growth and metabolism by the light/dark cycle. During the light period, PSB pigments capture photons through photoreactions, driving electron transfer, generating electrical energy, and ultimately converting it into ATP; Simultaneously, the Calvin cycle efficiency is enhanced, leading to the accumulation of cell growth and SCP. During the dark period, PSB cells focus on the division process, increasing overall biomass. This research can provide innovative insights to enhance the SCP synthesis in wastewater systems using PSB. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
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