1. Integrated Multi-Omics Reveals New Ruminal Microbial Features Associated with Peanut Vine Efficiency in Dairy Cattle.
- Author
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Teng, Zhanwei, Zhang, Ningning, Zhang, Lijie, Zhang, Liyang, Liu, Shenhe, Fu, Tong, Wang, Qinghua, and Gao, Tengyun
- Subjects
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PLANT fibers , *BACTERIAL enzymes , *GLYCOSIDASES , *CROP residues , *CROP improvement - Abstract
Simple Summary: Peanut vines are abundant and cheap, and are a key forage source for ruminants; however, knowledge of the bacterial species that colonize peanut vines over time during rumen incubation remains limited. In this study, in situ nylon bag degradation, scanning electron microscopy, and 16S rRNA gene sequencing and metagenomics technology were used to study the attachment characteristics and function of microorganisms involved in peanut vine degradation, with the aim of providing basic knowledge regarding the utilization of peanut vine and other roughage. Our results demonstrate that the colonization of peanut vine by microorganisms is dynamic in the rumen. The dominant phyla and genera, as well as the structure and function, of the microbial communities varied over time. This experiment identified the key microorganisms and CAZymes were important for plant fiber degradation. Therefore, our data proved new insights into biomass conversion, reveal that numerous bacteria and enzymes are involved in forage degradation in the rumen, and lay the foundation for targeted improvement of crop residue utilization for ruminants. The aim of this study was to improve the utilization of peanut vines as forage material for ruminants by investigating the degradation pattern of peanut vines in the dairy cow rumen. Samples of peanut vine incubated in cow rumens were collected at various time points. Bacterial diversity was investigated by scanning electron microscopy (SEM) and 16S rRNA gene sequencing. Carbohydrate-active enzymes (CAZymes) were analyzed by metagenomics. The peanut vines degraded rapidly from 2 to 24 h, before slowing from 24 to 72 h. SEM images confirmed dynamic peanut vine colonization. Firmicutes and Bacteroidetes were the two most dominant bacterial phyla throughout. Principal coordinates analysis indicated significant microbial composition changes at 6 and 24 h. This may be because, in the early stage, soluble carbohydrates that are easily degradable were degraded, while in the later stage, fibrous substances that are difficult to degrade were mainly degraded. Glycoside hydrolases (GHs) were the most abundant CAZymes, with peak relative abundance at 6 h (56.7 trans per million, TPM), and reducing at 24 (55.9 TPM) and 72 h (55.3 TPM). Spearman correlation analysis showed that Alistipes_sp._CAG:435, Alistipes_sp._CAG:514, Bacteroides_sp._CAG:1060, Bacteroides_sp._CAG:545, Bacteroides_sp._CAG:709, Bacteroides_sp._CAG:770, bacterium_F082, bacterium_F083, GH29, GH78, and GH92 were important for plant fiber degradation. These findings provide fundamental knowledge about forage degradation in the cow rumen, and will be important for the targeted improvement of ruminant plant biomass utilization efficiency. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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