108 results on '"oligopeptide transporter"'
Search Results
2. An oligo peptide transporter family member, OsOPT7, mediates xylem unloading of Fe for its preferential distribution in rice.
- Author
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Yamaji, Naoki, Yoshioka, Yuma, Huang, Sheng, Miyaji, Takaaki, Sasaki, Akimasa, and Ma, Jian Feng
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PEPTIDES , *LOADING & unloading , *IMMUNOSTAINING , *XYLEM , *FAMILIES , *IRON - Abstract
Summary: Iron (Fe) needs to be delivered to different organs and tissues of above‐ground parts for playing its multiple physiological functions once it is taken up by the roots. However, the mechanisms underlying Fe distribution are poorly understood.We functionally characterized OsOPT7, a member of oligo peptide transporter family in terms of expression patterns, localization, transport activity and phenotypic analysis of knockdown lines.OsOPT7 was highly expressed in the nodes, especially in the uppermost node I, and its expression was upregulated by Fe‐deficiency. OsOPT7 transports ferrous iron into the cells coupled with proton. Immunostaining revealed that OsOPT7 is mainly localized in the xylem parenchyma cells of the enlarged vascular bundles in the nodes and vascular tissues in the leaves. Knockdown of OsOPT7 did not affect the Fe uptake, but altered Fe distribution; less Fe was distributed to the new leaf, upper nodes and developing panicle, but more Fe was distributed to the old leaves. Furthermore, knockdown of OsOPT7 also resulted in less Fe distribution to the leaf sheath, but more Fe to the leaf blade.Taken together, OsOPT7 is involved in the xylem unloading of Fe for both long‐distance distribution to the developing organs and local distribution within the leaf in rice. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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3. Candida tropicalis oligopeptide transporters assist in the transmembrane transport of the antimicrobial peptide CGA-N9.
- Author
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Wu, Jiasha, Li, Ruifang, Shen, Yunpeng, Zhang, Xinhui, Wang, Xueqin, Wang, Zichao, Zhao, Yingyuan, Huang, Liang, Zhang, Lan, and Zhang, Beibei
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ANTIMICROBIAL peptides , *CANDIDA tropicalis , *MOLECULAR docking , *MOLECULAR cloning , *MYCOSES , *ECHINOCANDINS , *OLIGOPEPTIDES - Abstract
Candida tropicalis is often reported as the second or third most common pathogen causing fungal infections. Antimicrobial peptides (AMPs) have attracted increasing attention for their broad-spectrum antimicrobial properties and low cytotoxicity. Our previous studies have shown that CGA-N9, a non-membrane-rupturing AMP, crosses the cell membrane to exert anticandidal activity. We speculate that there are some related transporters that assist in the transmembrane transport of CGA-N9. In this study, the relationship between CGA-N9 lethality kinetics and its real-time transmembrane amount in C. tropicalis cells was investigated. The results demonstrated that there was a positive correlation between its candicidal activity and transmembrane amount. A total of 12 oligopeptide transporter (OPT) coding sequences (CDSs) were cloned from C. tropicalis by using the conservative OPT gene sequences of Candida spp. to design primers and were named C. tropicalis OPTs (CtOPTs). The results of RT‒qPCR demonstrated that the expression levels of CtOPT1, CtOPT9 and CtOPT12 were correlated with the CGA-N9 transmembrane amount in a time-dependent manner. The results of molecular docking demonstrated that CtOPT1, CtOPT9 and CtOPT12 interact strongly with CGA-N9. Therefore, CtOPT1, CtOPT9 and CtOPT12 were predicted to assist in the transmembrane transport of the AMP CGA-N9. [Display omitted] • The coding sequences of the C. tropicalis oligopeptide transporters are cloned. • Three CtOPTs expression levels are correlated with the CGA-N9 transmembrane amount. • CtOPT1, CtOPT9 and CtOPT12 dock with CGA-N9. • Three CtOPTs assist in the transmembrane transport of antimicrobial peptide CGA-N9. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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4. Phloem-specific overexpression of AtOPT6 alters glutathione, phytochelatin, and cadmium distribution in Arabidopsis thaliana.
- Author
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Wongkaew, Arunee, Nakamura, Shin-ichi, Rai, Hiroki, Yokoyama, Tadashi, Nakasathien, Sutkhet, and Ohkama-Ohtsu, Naoko
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PHYTOCHELATINS , *ARABIDOPSIS thaliana , *GLUTATHIONE , *PHLOEM , *CADMIUM - Abstract
The Arabidopsis oligopeptide transporter AtOPT6 is reportedly involved in the long-distance transport of thiol compounds into sink organs. In the present study, transgenic Arabidopsis lines overexpressing AtOPT6 under the control of a phloem-specific promoter, sucrose-proton symporter 2 (pSUC2), were analyzed for thiol and cadmium (Cd) distribution during the reproductive stage, both with and without Cd exposure. Phloem specific AtOPT6 -overexpressing lines did not exhibit an evident impact on bolting time. In the absence of Cd exposure, these transgenic lines showed significantly enhanced transport of endogenous glutathione into siliques, accompanied by a reduction in the glutathione content of flowers and roots during the reproductive stage. Additionally, exposure of the roots of the phloem specific AtOPT6 -overexpressing lines to Cd altered the distribution of thiol compounds, resulting in an increase in the content of phytochelatins in sink organs, contributing to a significant elevation of Cd contents in reproductive sink. Our findings confirm the crucial role of AtOPT6 in unloading phytochelatin-Cd conjugates from the phloem into sink organ. • Phloem-specific AtOPT6 overexpression didn't affect bolting time in Arabidopsis. • Phloem-specific AtOPT6 overexpression increased silique glutathione without Cd. • Phloem-specific AtOPT6 overexpression raised Cd and PCs in sink organs, confirming unloading PC-Cd in sink organs. [ABSTRACT FROM AUTHOR]
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- 2024
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5. Oligopeptide Transporters of Nonencapsulated Streptococcus pneumoniae Regulate CbpAC and PspA Expression and Reduce Complement-Mediated Clearance
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Courtney D. Thompson, Jessica L. Bradshaw, Wesley S. Miller, Ana G. Jop Vidal, Jorge E. Vidal, Jason W. Rosch, Larry S. McDaniel, and Lance E. Keller
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nonencapsulated S. pneumoniae ,Streptococcus pneumoniae ,innate immunity ,oligopeptide transporter ,pneumococcus ,Microbiology ,QR1-502 - Abstract
ABSTRACT Streptococcus pneumoniae colonizes the human nasopharynx and causes several diseases. Pneumococcal vaccines target the polysaccharide capsule and prevent most serious disease, but there has been an increase in the prevalence of nonencapsulated S. pneumoniae (NESp). Previously, it was thought that a capsule was necessary to cause invasive disease. NESp strains expressing the oligopeptide transporters AliC and AliD have been isolated from patients with invasive disease. The AliC and AliD oligopeptide transporters regulate the expression of several genes, including choline binding protein AC (CbpAC) (a homolog of PspA), which aids in reducing C3b deposition. It is hypothesized that by altering CbpAC expression, AliC and AliD provide protection from classical complement-mediated clearance by reducing C-reactive protein (CRP) binding. Our study demonstrates that AliC and AliD regulate CbpAC expression in NESp and that AliD found in certain serotypes of encapsulated strains regulates PspA expression. C3b deposition was increased in the NESp ΔaliD and encapsulated mutants in comparison to the wild type. NESp strains expressing AliC and AliD have a significant decrease in C1q and CRP deposition in comparison to the ΔaliC ΔaliD mutant. The complement protein C1q is required for NESp clearance in a murine model and increases opsonophagocytosis. By regulating CbpAC expression, NESp inhibits CRP binding to the bacterial surface and blocks classical complement activation, leading to greater systemic survival and virulence. Due to the increase in the prevalence of NESp, it is important to gain a better understanding of NESp virulence mechanisms that aid in establishing disease and persistence within a host by avoiding clearance by the immune system. IMPORTANCE Streptococcus pneumoniae (pneumococcus) can cause a range of diseases. Although there is a robust pneumococcal vaccination program that reduces invasive pneumococcal disease by targeting various polysaccharide capsules, there has been an increase in the isolation of nonvaccine serotypes and nonencapsulated S. pneumoniae (NESp) strains. While most studies of pneumococcal pathogenesis have focused on encapsulated strains, there is little understanding of how NESp causes disease. NESp lacks a protective capsule but contains novel genes, such as aliC and aliD, which have been shown to regulate the expression of numerous genes and to be required for NESp virulence and immune evasion. Furthermore, NESp strains have high transformation efficiencies and harbor resistance to multiple drugs. This could be deleterious to current treatment strategies employed for pneumococcal disease as NESp can be a reservoir of drug resistance genes. Therefore, deciphering how NESp survives within a host and facilitates disease is a necessity that will allow the fabrication of improved, broad-spectrum treatments and preventatives against pneumococcal disease. Our study provides a better understanding of NESp virulence mechanisms during host-pathogen interactions through the examination of genes directly regulated by the NESp proteins AliC and AliD.
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- 2023
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6. Genome-Wide Identification and Transcript Analysis Reveal Potential Roles of Oligopeptide Transporter Genes in Iron Deficiency Induced Cadmium Accumulation in Peanut.
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Wang, Chaohui, Wang, Xueqin, Li, Jinxiu, Guan, Junhua, Tan, Zengjing, Zhang, Zheng, and Shi, Gangrong
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PEANUTS ,IRON deficiency ,GENES ,CADMIUM ,CHROMOSOME duplication ,PROTEIN structure - Abstract
The oligopeptide transporter (OPT) family is a group of proton-coupled symporters that play diverse roles, including metal homeostasis. However, little is known about this family of peanuts. To reveal the potential roles of AhOPT genes in Fe/Cd interactions, peanut AhOPT genes were genome-widely identified, and the relationships between gene expression and Cd accumulation were detected in two contrasting peanut cultivars (Fenghua 1 and Silihong) under Fe-sufficient or Fe-deficient conditions. A total of 40 AhOPT genes were identified in peanuts, which were divided into two subfamilies (PT and YS). Most AhOPT genes underwent gene duplication events predominated by whole-genome duplication. Clustered members generally have similar protein structures. However, gene structural divergences occurred in most of the duplicated genes. Transcription analysis revealed that AhOPT3.2 / 3.4 and AhYSL3.1 / 3.2 might be responsible for Fe deficiency tolerance, while AhOPT3.1 / 3.4, AhOPT7.1 / 7.2 , and AhYSL1.1 be involved in Fe/Cd interactions. These genes might be regulated by transcription factors, including ATHB-12, ATHB-6, DIVARICATA, MYB30, NAC02, DOF3.4, IDD7 , and LUX. Reduced expressions of AhYSL3.1 / 3.2 and higher expressions of AhOPT3.4 might contribute to higher Fe-deficiency tolerance in Silihong. Higher expression of AhOPT7.3 and AhOPT6.1 might be responsible for low Cd accumulation in Fenghua 1. Our results confirmed that AhOPT3 / 6 / 7 and AhYSL1 / 3 might be involved in the transport of Fe and/or Cd in peanuts and provided new clues to understanding potential mechanisms of Fe/Cd interactions. [ABSTRACT FROM AUTHOR]
- Published
- 2022
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7. Genome-Wide Identification and Transcript Analysis Reveal Potential Roles of Oligopeptide Transporter Genes in Iron Deficiency Induced Cadmium Accumulation in Peanut
- Author
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Chaohui Wang, Xueqin Wang, Jinxiu Li, Junhua Guan, Zengjing Tan, Zheng Zhang, and Gangrong Shi
- Subjects
peanut ,oligopeptide transporter ,cultivar ,Fe deficiency ,Cd accumulation ,Plant culture ,SB1-1110 - Abstract
The oligopeptide transporter (OPT) family is a group of proton-coupled symporters that play diverse roles, including metal homeostasis. However, little is known about this family of peanuts. To reveal the potential roles of AhOPT genes in Fe/Cd interactions, peanut AhOPT genes were genome-widely identified, and the relationships between gene expression and Cd accumulation were detected in two contrasting peanut cultivars (Fenghua 1 and Silihong) under Fe-sufficient or Fe-deficient conditions. A total of 40 AhOPT genes were identified in peanuts, which were divided into two subfamilies (PT and YS). Most AhOPT genes underwent gene duplication events predominated by whole-genome duplication. Clustered members generally have similar protein structures. However, gene structural divergences occurred in most of the duplicated genes. Transcription analysis revealed that AhOPT3.2/3.4 and AhYSL3.1/3.2 might be responsible for Fe deficiency tolerance, while AhOPT3.1/3.4, AhOPT7.1/7.2, and AhYSL1.1 be involved in Fe/Cd interactions. These genes might be regulated by transcription factors, including ATHB-12, ATHB-6, DIVARICATA, MYB30, NAC02, DOF3.4, IDD7, and LUX. Reduced expressions of AhYSL3.1/3.2 and higher expressions of AhOPT3.4 might contribute to higher Fe-deficiency tolerance in Silihong. Higher expression of AhOPT7.3 and AhOPT6.1 might be responsible for low Cd accumulation in Fenghua 1. Our results confirmed that AhOPT3/6/7 and AhYSL1/3 might be involved in the transport of Fe and/or Cd in peanuts and provided new clues to understanding potential mechanisms of Fe/Cd interactions.
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- 2022
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8. Glutathione Transporters in Plants
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Zeng, Xuan, Qiu, Diyang, Hu, Rui, Zhang, Mingyong, Hossain, Mohammad Anwar, editor, Mostofa, Mohammad Golam, editor, Diaz-Vivancos, Pedro, editor, Burritt, David J, editor, Fujita, Masayuki, editor, and Tran, Lam-Son Phan, editor
- Published
- 2017
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9. Dipeptidyl‐peptidases: Key enzymes producing entry forms of extracellular proteins in asaccharolytic periodontopathic bacterium Porphyromonas gingivalis.
- Author
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Nemoto, Takayuki K. and Ohara Nemoto, Yuko
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CD26 antigen , *ENZYMES , *EXTRACELLULAR fluid , *PORPHYROMONAS gingivalis , *OLIGOPEPTIDES - Abstract
Porphyromonas gingivalis, a pathogen of chronic periodontitis, is an asaccharolytic microorganism that solely utilizes nutritional amino acids as its energy source and cellular constituents. The bacterium is considered to incorporate proteinaceous nutrients mainly as dipeptides, thus exopeptidases that produce dipeptides from polypeptides are critical for survival and proliferation. We present here an overview of dipeptide production by P. gingivalis mediated by dipeptidyl‐peptidases (DPPs), e.g., DPP4, DPP5, DPP7, and DPP11, serine exopeptidases localized in periplasm, which release dipeptides from the N‐terminus of polypeptides. Additionally, two other exopeptidases, acylpeptidyl‐oligopeptidase (AOP) and prolyl tripeptidyl‐peptidase A (PTP‐A), which liberate N‐terminal acylated di‐/tri‐peptides and tripeptides with Pro at the third position, respectively, provide polypeptides in an acceptable form for DPPs. Hence, a large fraction of dipeptides is produced from nutritional polypeptides by DPPs with differential specificities in combination with AOP and PTP‐A. The resultant dipeptides are then incorporated across the inner membrane mainly via a proton‐dependent oligopeptide transporter (POT), a member of the major facilitator superfamily. Recent studies also indicate that DPP4 and DPP7 directly link between periodontal and systemic diseases, such as type 2 diabetes mellitus and coagulation abnormality, respectively. Therefore, these dipeptide‐producing and incorporation molecules are considered to be potent targets for prevention and treatment of periodontal and related systemic diseases. [ABSTRACT FROM AUTHOR]
- Published
- 2021
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10. Preferential dipeptide incorporation of Porphyromonas gingivalis mediated by proton-dependent oligopeptide transporter (Pot).
- Author
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Ohara-Nemoto, Yuko, Sarwar, Mohammad Tanvir, Shimoyama, Yu, Kobayakawa, Takeshi, and Nemoto, Takayuki K
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PORPHYROMONAS gingivalis , *OLIGOPEPTIDES , *AMINO acids , *CELL anatomy , *BACTERIAL cells , *TRIPEPTIDES - Abstract
Multiple dipeptidyl-peptidases (DPPs) are present in the periplasmic space of Porphyromonas gingivalis , an asaccharolytic periodontopathic bacterium. Dipeptides produced by DPPs are presumed to be transported into the bacterial cells and metabolized to generate energy and cellular components. The present study aimed to identify a transporter responsible for dipeptide uptake in the bacterium. A real-time metabolic analysis demonstrated that P. gingivalis preferentially incorporated Gly–Xaa dipeptides, and then, single amino acids, tripeptides and longer oligopeptides to lesser extents. Heterologous expression of the P. gingivalis serine/threonine transporter (SstT; PGN_1460), oligopeptide transporter (Opt; PGN_1518) and proton-dependent oligopeptide transporter (Pot; PGN_0135) genes demonstrated that Escherichia coli expressing Pot exclusively incorporated Gly–Gly, while SstT managed Ser uptake and Opt was responsible for Gly–Gly–Gly uptake. Dipeptide uptake was significantly decreased in a P. gingivalis Δ pot strain and further suppressed in a Δ pot- Δ opt double-deficient strain. In addition, the growth of the Δ pot strain was markedly attenuated and the Δ pot- Δ opt strain scarcely grew, whereas the Δ sstT strain grew well almost like wild type. Consequently, these results demonstrate that predominant uptake of dipeptide in P. gingivalis is mostly managed by Pot. We thus propose that Pot is a potential therapeutic target of periodontal disease and P. gingivalis -related systemic diseases. [ABSTRACT FROM AUTHOR]
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- 2020
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11. Alternate expression of PEPT1 and PEPT2 in epidermal differentiation is required for NOD2 immune responses by bacteria-derived muramyl dipeptide.
- Author
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Kudo, Michiko, Kobayashi-Nakamura, Kumiko, Kitajima, Natsuko, and Tsuji-Naito, Kentaro
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OLIGOPEPTIDES , *IMMUNE response , *POLYMERASE chain reaction , *FAMILY roles , *KERATINOCYTES ,KERATINOCYTE differentiation - Abstract
Peptide transporters 1 and 2 (PEPT1 and PEPT2) are proton-coupled oligopeptide transporter members of the solute carrier 15 family and play a role in the cellular uptake of di/tri-peptides and peptidomimetics. Our previous work showed that PEPT2 is predominantly expressed within undifferentiated keratinocytes. Here we show that PEPT2 expression decreases as keratinocyte differentiation progresses and that PEPT1 alternately is expressed at later stages. Absolute quantification using quantitative polymerase chain reaction revealed that the expression level of PEPT1 is about 17 times greater than that of PEPT2. Immunohistochemical study of human skin provided evidence of PEPT1 in the epidermis. The uptake of glycylsarcosine into keratinocytes was significantly blocked by PEPT inhibitors, including nateglinide and glibenclamide. Moreover, we found that PEPT1 knockdown in differentiated keratinocytes significantly suppressed the influence of a bacterial-derived peptide, muramyl dipeptide (MDP), on the production of proinflammatory cytokine interleukin-8, implying that bacteria-derived oligopeptides can be transported by PEPT1 in advanced differentiated keratinocytes. Taken together, PEPT1 and PEPT2 may concertedly play an important role in MDP-NOD2 signaling in the epidermis, which provides new insight into the mechanisms of skin homeostasis against microbial pathogens. Image 1 • Keratinocytes alter the expression pattern of PEPT1 and PEPT2 during differentiation. • Outer layers of the epidermis express these transporters more than the inner ones. • PEPT1 and PEPT2 are involved in MDP-NOD2 signaling in the epidermis. [ABSTRACT FROM AUTHOR]
- Published
- 2020
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12. Phloem-specific overexpression of AtOPT6 in Arabidopsis enhances Zn transport into shoots.
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Wongkaew, Arunee, Nakamura, Shin-ichi, Sekimoto, Hitoshi, Yokoyama, Tadashi, and Ohkama-Ohtsu, Naoko
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MEMBRANE transport proteins , *ANALYSIS of heavy metals , *ARABIDOPSIS , *PLANT shoots - Abstract
• Overexpression of AtOPT6 in phloem tissues affected Zn behaviors in Arabidopsis. • AtOPT6 -overexpressing lines showed increased foliar glutathione contents. • Enhanced GSH transport in phloem tissues increased Zn translocation into shoots. The Arabidopsis oligopeptide transporter AtOPT6 is membrane transport protein that mediated transport of glutathione in both the reduced (GSH) and oxidized (GSSG) forms. In this study, the role of AtOPT6 in glutathione distribution throughout the plant was investigated. We found that transgenic Arabidopsis overexpressing AtOPT6 under the control of a phloem-specific promoter of sucrose-proton symporter 2 (pSUC2), remarkably increased AtOPT6 transcript levels, ranging from 30- to 40-fold in shoots and 6- to 10-fold in roots, relative to the wild type. AtOPT6 -overexpressing lines could elevate the foliar glutathione content; however, glutathione content in the phloem did not change. We observed that the ratio of shoot glutathione content to total glutathione content increased in AtOPT6 -overexpressing lines, but not in transgenic Arabidopsis with elevated foliar GSH synthesis. These results indicate the possibility that loading and unloading of glutathione in phloem tissues are enhanced in AtOPT6 -overexpressing lines under the control of pSUC2. The results of heavy metal analysis revealed that transgenic Arabidopsis overexpressing AtOPT6 under the control of pSUC2 could promote the transport of Zn into shoots as effectively as transgenic Arabidopsis with elevated foliar GSH synthesis, or wild-type plants with exogenous foliar application of GSH. [ABSTRACT FROM AUTHOR]
- Published
- 2019
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13. AtOPT6 Protein Functions in Long-Distance Transport of Glutathione in Arabidopsis thaliana.
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Wongkaew, Arunee, Asayama, Koki, Kitaiwa, Taisuke, Nakamura, Shin-Ichi, Kojima, Katsuhiro, Stacey, Gary, Sekimoto, Hitoshi, Yokoyama, Tadashi, and Ohkama-Ohtsu, Naoko
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OLIGOPEPTIDES , *GLUTATHIONE , *ARABIDOPSIS thaliana , *PHYTOCHELATINS , *THIOLS - Abstract
The involvement of the Arabidopsis oligopeptide transporter AtOPT6, which was previously shown to take up glutathione (GSH) when expressed in yeast cells or in Xenopus laevis oocytes, in GSH transport was analyzed using opt6 knockout mutant lines. The concentration of GSH in flowers or siliques was lower in opt6 mutants relative to wild-type plants, suggesting involvement of AtOPT6 in long-distance transport of GSH. The GSH concentration in phloem sap was similar between opt6 mutants and wild-type plants. These results, combined with earlier reports showing expression of AtOPT6 in the vascular bundle, especially in the cambial zone, suggest that AtOPT6 functions to transport GSH into cells surrounding the phloem in sink organs. The opt6 mutant plants showed delayed bolting, implying the importance of AtOPT6 for regulation of the transition from vegetative to reproductive growth. After cadmium (Cd) treatment, the concentration of the major phytochelatin PC2 was lower in flowers in the opt6 mutants and Cd was accumulated in roots of opt6 mutant plants compared with wild-type plants. These results suggest that AtOPT6 is likely to be involved in transporting GSH, PCs and Cd complexed with these thiols into sink organs. [ABSTRACT FROM AUTHOR]
- Published
- 2018
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14. Preparation and characterization of intestine PepT1-targeted calcium carbonate nanoparticles.
- Author
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Yunqiang Deng, Yao Jin, Chuyu He, Yang Zou, Yuanhang Zhou, Shidi Han, Chuhang Zhou, Qi Liu, Xinru Li, Yanxia Zhou, and Yan Liu
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CALCIUM carbonate , *NANOPARTICLE synthesis , *TRANSCYTOSIS , *INTESTINAL absorption , *SCANNING electron microscopy - Abstract
To improve the oral absorption of poorly water-soluble drugs by overcoming the intestinal epithelium barrier, calcium carbonate nanoparticles targeting to intestine peptide transporter 1 (PepT1) were fabricated by modification of the surface of calcium carbonate nanoparticles with Gly-Sar. Gly-Sar-conjugated TPGS was successfully synthesized and characterized, and coumarin 6-loaded Gly-Sar modified calcium carbonate nanoparticles were then prepared and characterized to have a nano-scaled size of about 193 nm in diameter, cracked surface morphology under a scanning electron microscope, and high drug loading efficiency (60.5±5.9)%. Moreover, the Gly-Sar-modified calcium carbonate nanoparticles exhibited better drug loading stability during the process of their transcellular transport, and evidently enhanced intestinal absorption of poorly water-soluble agents. Therefore, the designed intestine PepT1-targeted calcium carbonate nanoparticles might have a promising potential for oral delivery of poorly water-soluble drugs. [ABSTRACT FROM AUTHOR]
- Published
- 2018
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15. The benefits and risks of expressing the POT and FOT family of oligopeptide transporters in <italic>Saccharomyces cerevisiae</italic>.
- Author
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Kitamura, Kenji and Kinsui, Eldaa Zefany Banami
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YEAST , *SACCHAROMYCES cerevisiae , *OLIGOPEPTIDES - Abstract
In the yeast
Saccharomyces cerevisiae , all strains possess a gene for the evolutionarily conserved POT family peptide transporter, Ptr2; however, the genes for a novel FOT family transporter were found only in some wine brewing strains. The substrate specificity of the POT and FOT family of transporters was compared. Among the naturally occurring oligopeptides that were tested, Lys-Leu and Arg-Phe were Ptr2-specific substrates. Artificial dipeptide aspartame was imported specifically through the FOT transporter, but the structurally similar Asp-Phe was a substrate of both FOT and Ptr2 transporters. Furthermore, only the FOT transporter was important for high sensitivity to an antibiotic puromycin. These results demonstrate that the POT and FOT family of transporters have distinct substrate preferences although both transporters import overlapping dipeptide substrates. Having POT and FOT transporters is advantageous for cells to acquire nutrients, but also detrimental when these cells are exposed to the toxic molecules of their substrates. [ABSTRACT FROM AUTHOR]- Published
- 2018
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16. Fate of egg proteins during the development of <italic>Columba livia domestica</italic> embryo.
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Shbailat, Seba Jamal and Aslan, Ibtisam Omar
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PIGEON physiology ,PROTEIN content of eggs ,EMBRYOLOGY ,OLIGOPEPTIDES ,DEVELOPMENTAL biology - Abstract
Abstract: The transfer of egg white into the yolk and consumption of yolk proteins by the embryo are largely unexplored in the pigeon
Columba livia domestica . Here, we investigated the route of egg white transfer as well as the degradation and uptake of yolk proteins by the pigeon embryo. Initially, we tested the electrophoretic patterns of proteins in different egg compartments throughout development. Then, we used lysozyme as a reference protein to follow the egg white transfer, and we measured its activity usingMicrococcus lysodeikticus as a substrate. Moreover, we determined the general protease activity during different developmental stages in the yolk using casein. Finally, we examined the expression of aminopeptidase‐N (APN ) and oligopeptide transporterPepT1 genes in the yolk sac membrane (YSM) from incubation day 8 until day 17. Several electrophoretic bands of presumptive egg white proteins appeared in different egg compartments. Also, lysozyme activity was detected chronologically in the egg compartments. It appeared on day 12 in the amniotic and intestinal fluids and on day 14 in the yolk. Moreover, protease activity in the yolk increased significantly on day 14 and thereafter.APN expression was largest on day 8 and reduced generally afterward, whereasPepT1 expression peaked between days 13 and 15 but then reduced substantially. Our results suggest that the egg white proteins move through the amnion and intestine into the yolk where they undergo degradation by the activated proteases. Furthermore, the YSM appears to have a role in protein consumption, and this role decreases toward hatch. [ABSTRACT FROM AUTHOR]- Published
- 2018
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17. The OPT Family Functions in Long-Distance Peptide and Metal Transport in Plants
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Lubkowitz, Mark and Setlow, Jane K., editor
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- 2006
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18. Dipeptide Transporters
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Inui, Ken-ichi, Terada, Tomohiro, Borchardt, Ronald T., editor, Amidon, Gordon L., editor, and Sadée, Wolfgang, editor
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- 2002
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19. Critical role of the proton-dependent oligopeptide transporter (POT) in the cellular uptake of the peptidyl nucleoside antibiotic, blasticidin S.
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Kitamura, Kenji, Kinsui, Eldaa Zefany Banami, and Abe, Fumiyoshi
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GLUTAMATE transporters , *CELL growth , *ANTIBIOTICS , *PROTEIN synthesis , *RESPONSE inhibition , *SCHIZOSACCHAROMYCES pombe - Abstract
Blasticidin S (BlaS) interferes in the cell growth of both eukaryotes and prokaryotes. Its mode of action as a protein synthesis inhibitor has been investigated extensively. However, the mechanism of BlaS transport into the target cells is not understood well. Here, we show that Ptr2, a member of the proton-dependent oligopeptide transporter (POT) family, is responsible for the uptake of BlaS in yeasts Schizosaccharomyces pombe and Saccharomyces cerevisiae . Notably, some mutants of Ptr2 that are dysfunctional in dipeptide uptake were still competent to transport BlaS. Mouse-derived oligopeptide transporter PepT1 conferred BlaS sensitivity in the S . cerevisiae ptr2 ∆ mutant. Furthermore, bacterial POT family proteins also potentiated the BlaS sensitivity of E . coli . The role of the POT family oligopeptide transporters in the uptake of BlaS is conserved across species from bacteria to mammals. [ABSTRACT FROM AUTHOR]
- Published
- 2017
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20. Genome-Wide Identification and Comparative Analysis for OPT Family Genes in Panax ginseng and Eleven Flowering Plants
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He Su, Yang Chu, Junqi Bai, Lu Gong, Juan Huang, Wen Xu, Jing Zhang, Xiaohui Qiu, Jiang Xu, and Zhihai Huang
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Panax ginseng ,oligopeptide transporter ,flowering plant ,phylogeny ,transcription factor ,Organic chemistry ,QD241-441 - Abstract
Herb genomics and comparative genomics provide a global platform to explore the genetics and biology of herbs at the genome level. Panax ginseng C.A. Meyer is an important medicinal plant for a variety of bioactive chemical compounds of which the biosynthesis may involve transport of a wide range of substrates mediated by oligopeptide transporters (OPT). However, information about the OPT family in the plant kingdom is still limited. Only 17 and 18 OPT genes have been characterized for Oryza sativa and Arabidopsis thaliana, respectively. Additionally, few comprehensive studies incorporating the phylogeny, gene structure, paralogs evolution, expression profiling, and co-expression network between transcription factors and OPT genes have been reported for ginseng and other species. In the present study, we performed those analyses comprehensively with both online tools and standalone tools. As a result, we identified a total of 268 non-redundant OPT genes from 12 flowering plants of which 37 were from ginseng. These OPT genes were clustered into two distinct clades in which clade-specific motif compositions were considerably conservative. The distribution of OPT paralogs was indicative of segmental duplication and subsequent structural variation. Expression patterns based on two sources of RNA-Sequence datasets suggested that some OPT genes were expressed in both an organ-specific and tissue-specific manner and might be involved in the functional development of plants. Further co-expression analysis of OPT genes and transcription factors indicated 141 positive and 11 negative links, which shows potent regulators for OPT genes. Overall, the data obtained from our study contribute to a better understanding of the complexity of the OPT gene family in ginseng and other flowering plants. This genetic resource will help improve the interpretation on mechanisms of metabolism transportation and signal transduction during plant development for Panax ginseng.
- Published
- 2018
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21. Cultured Intestinal Epithelial Cell Models
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Hidalgo, Ismael J., Borchardt, Ronald T., editor, Smith, Philip L., editor, and Wilson, Glynn, editor
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- 1996
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22. Oligopeptide Transporters of Nonencapsulated Streptococcus pneumoniae Regulate CbpAC and PspA Expression and Reduce Complement-Mediated Clearance.
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Thompson CD, Bradshaw JL, Miller WS, Vidal AGJ, Vidal JE, Rosch JW, McDaniel LS, and Keller LE
- Subjects
- Animals, Humans, Mice, Bacterial Proteins genetics, Bacterial Proteins metabolism, Carrier Proteins genetics, Carrier Proteins metabolism, Choline metabolism, Complement C1q, Darbepoetin alfa metabolism, Membrane Transport Proteins metabolism, Pneumococcal Infections microbiology, Streptococcus pneumoniae
- Abstract
Streptococcus pneumoniae colonizes the human nasopharynx and causes several diseases. Pneumococcal vaccines target the polysaccharide capsule and prevent most serious disease, but there has been an increase in the prevalence of nonencapsulated S. pneumoniae (NESp). Previously, it was thought that a capsule was necessary to cause invasive disease. NESp strains expressing the oligopeptide transporters AliC and AliD have been isolated from patients with invasive disease. The AliC and AliD oligopeptide transporters regulate the expression of several genes, including choline binding protein AC (CbpAC) (a homolog of PspA), which aids in reducing C3b deposition. It is hypothesized that by altering CbpAC expression, AliC and AliD provide protection from classical complement-mediated clearance by reducing C-reactive protein (CRP) binding. Our study demonstrates that AliC and AliD regulate CbpAC expression in NESp and that AliD found in certain serotypes of encapsulated strains regulates PspA expression. C3b deposition was increased in the NESp Δ aliD and encapsulated mutants in comparison to the wild type. NESp strains expressing AliC and AliD have a significant decrease in C1q and CRP deposition in comparison to the Δ aliC Δ aliD mutant. The complement protein C1q is required for NESp clearance in a murine model and increases opsonophagocytosis. By regulating CbpAC expression, NESp inhibits CRP binding to the bacterial surface and blocks classical complement activation, leading to greater systemic survival and virulence. Due to the increase in the prevalence of NESp, it is important to gain a better understanding of NESp virulence mechanisms that aid in establishing disease and persistence within a host by avoiding clearance by the immune system. IMPORTANCE Streptococcus pneumoniae (pneumococcus) can cause a range of diseases. Although there is a robust pneumococcal vaccination program that reduces invasive pneumococcal disease by targeting various polysaccharide capsules, there has been an increase in the isolation of nonvaccine serotypes and nonencapsulated S. pneumoniae (NESp) strains. While most studies of pneumococcal pathogenesis have focused on encapsulated strains, there is little understanding of how NESp causes disease. NESp lacks a protective capsule but contains novel genes, such as aliC and aliD , which have been shown to regulate the expression of numerous genes and to be required for NESp virulence and immune evasion. Furthermore, NESp strains have high transformation efficiencies and harbor resistance to multiple drugs. This could be deleterious to current treatment strategies employed for pneumococcal disease as NESp can be a reservoir of drug resistance genes. Therefore, deciphering how NESp survives within a host and facilitates disease is a necessity that will allow the fabrication of improved, broad-spectrum treatments and preventatives against pneumococcal disease. Our study provides a better understanding of NESp virulence mechanisms during host-pathogen interactions through the examination of genes directly regulated by the NESp proteins AliC and AliD.
- Published
- 2023
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23. l-Valine appended PLGA nanoparticles for oral insulin delivery.
- Author
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Jain, Ashish and Jain, Sanjay
- Subjects
- *
INSULIN therapy , *DRUG delivery systems , *THERAPEUTIC use of proteins , *DRUG carriers , *NANOMEDICINE , *LABORATORY rabbits - Abstract
Aims: Oral insulin delivery has been the major research issue, since many decades, due to several obvious advantages over other routes. However, this route poses several constraints for the delivery of peptides and proteins which are to be worked upon. The small intestine has been shown to be able to transport the l-forms of amino acids against a concentration gradient and that they compete for the mechanism concerned. So, l-valine was used as a ligand for carrier-mediated transport of insulin-loaded polylactic-co-glycolic acid (PLGA) nanoparticles (NPs). Methods: l-Valine-conjugated PLGA nanoparticles were prepared using double emulsion solvent evaporation method. The NPs and conjugated NPs were characterized for their size, drug entrapment efficiency, zeta potential, polydispersity index and in vitro insulin release. Results: Ex vivo studies on intestine revealed that conjugated nanoparticles showed greater insulin uptake as compared to non-conjugated nanoparticles. In vivo studies were performed on streptozotocin-induced diabetic rabbits. Oral suspension of insulin-loaded PLGA nanoparticles reduced blood glucose level from 265.4 ± 8.5 to 246.6 ± 2.4 mg/dL within 4 h which further decreased to 198.7 ± 7.1 mg/dL value after 8 h. The ligand-conjugated formulation on oral administration produced hypoglycaemic effect (216.9 ± 1.9 mg/dL) within 4 h of administration, and the hypoglycaemic effect prolonged till 12 h of oral administration. Simultaneously, the insulin concentration in withdrawn samples was also assessed and found that profile of insulin level is in compliance with the blood glucose reduction profile. Conclusions: Hence, it is concluded that the l-valine-conjugated NPs bearing insulin are the promising carrier for the transportation of insulin across the intestine on oral administration. [ABSTRACT FROM AUTHOR]
- Published
- 2015
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- View/download PDF
24. Iron deficiency regulated OsOPT7 is essential for iron homeostasis in rice.
- Author
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Bashir, Khurram, Ishimaru, Yasuhiro, Itai, Reiko, Senoura, Takeshi, Takahashi, Michiko, An, Gynheung, Oikawa, Takaya, Ueda, Minoru, Sato, Aiko, Uozumi, Nobuyuki, Nakanishi, Hiromi, and Nishizawa, Naoko
- Abstract
The molecular mechanism of iron (Fe) uptake and transport in plants are well-characterized; however, many components of Fe homeostasis remain unclear. We cloned iron-deficiency-regulated oligo peptide transporter 7 ( OsOPT7) from rice. OsOPT7 localized to the plasma membrane and did not transport Fe(III)-DMA or Fe(II)-NA and GSH in Xenopus laevis oocytes. Furthermore OsOPT7 did not complement the growth of yeast fet3fet4 mutant. OsOPT7 was specifically upregulated in response to Fe-deficiency. Promoter GUS analysis revealed that OsOPT7 expresses in root tips, root vascular tissue and shoots as well as during seed development. Microarray analysis of OsOPT7 knockout 1 ( opt7- 1) revealed the upregulation of Fe-deficiency-responsive genes in plants grown under Fe-sufficient conditions, despite the high Fe and ferritin concentrations in shoot tissue indicating that Fe may not be available for physiological functions. Plants overexpressing OsOPT7 do not exhibit any phenotype and do not accumulate more Fe compared to wild type plants. These results indicate that OsOPT7 may be involved in Fe transport in rice. [ABSTRACT FROM AUTHOR]
- Published
- 2015
- Full Text
- View/download PDF
25. Dipeptidyl-peptidases: Key enzymes producing entry forms of extracellular proteins in asaccharolytic periodontopathic bacterium Porphyromonas gingivalis
- Author
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Nemoto, Takayuki K., Ohara, Nemoto Yuko, Nemoto, Takayuki K., and Ohara, Nemoto Yuko
- Abstract
Porphyromonas gingivalis, a pathogen of chronic periodontitis, is an asaccharolytic microorganism that solely utilizes nutritional amino acids as its energy source and cellular constituents. The bacterium is considered to incorporate proteinaceous nutrients mainly as dipeptides, thus exopeptidases that produce dipeptides from polypeptides are critical for survival and proliferation. We present here an overview of dipeptide production by P. gingivalis mediated by dipeptidyl-peptidases (DPPs), e.g., DPP4, DPP5, DPP7, and DPP11, serine exopeptidases localized in periplasm, which release dipeptides from the N-terminus of polypeptides. Additionally, two other exopeptidases, acylpeptidyl-oligopeptidase (AOP) and prolyl tripeptidyl-peptidase A (PTP-A), which liberate N-terminal acylated di-/tri-peptides and tripeptides with Pro at the third position, respectively, provide polypeptides in an acceptable form for DPPs. Hence, a large fraction of dipeptides is produced from nutritional polypeptides by DPPs with differential specificities in combination with AOP and PTP-A. The resultant dipeptides are then incorporated across the inner membrane mainly via a proton-dependent oligopeptide transporter (POT), a member of the major facilitator superfamily. Recent studies also indicate that DPP4 and DPP7 directly link between periodontal and systemic diseases, such as type 2 diabetes mellitus and coagulation abnormality, respectively. Therefore, these dipeptide-producing and incorporation molecules are considered to be potent targets for prevention and treatment of periodontal and related systemic diseases., Molecular Oral Microbiology, 36(2), pp. 145-156; 2021
- Published
- 2020
26. Selective induction of putative iron transporters, OPT8a and OPT8b , in maize by mycorrhizal colonization.
- Author
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Kobae, Yoshihiro, Tomioka, Rie, Tanoi, Keitaro, Kobayashi, Natsuko I, Ohmori, Yoshihiro, Nishida, Sho, and Fujiwara, Toru
- Subjects
CORN ,NUTRITION ,MYCORRHIZAS ,IRON content of plants ,PLANT nutrition research ,SOIL science - Abstract
Arbuscular mycorrhizas support nutrient uptake from the soil. Here we demonstrated Iron-59 (59Fe) uptake in maize (Zea maysL.) through the mycorrhizal roots. Arbuscular mycorrhizal colonization did not strongly induce Strategy II-related genes, but the putative iron transporter genes,OPT8a and OPT8b, were induced by more than 50-fold. Our data provide a previously undescribed gene expression mode related to the iron uptake system of Strategy II plants. [ABSTRACT FROM PUBLISHER]
- Published
- 2014
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27. Dipeptidyl-peptidases: Key enzymes producing entry forms of extracellular proteins in asaccharolytic periodontopathic bacterium Porphyromonas gingivalis
- Author
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Yuko Ohara Nemoto and Takayuki K. Nemoto
- Subjects
0301 basic medicine ,Microbiology (medical) ,Immunology ,periodontal disease ,acylpeptidyl‐oligopeptidase ,Microbiology ,Serine ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,exopeptidase ,Humans ,Invited Reviews ,Dipeptidyl-Peptidases and Tripeptidyl-Peptidases ,General Dentistry ,Porphyromonas gingivalis ,acylpeptidyl-oligopeptidase ,chemistry.chemical_classification ,Oligopeptide ,Dipeptide ,Invited Review ,biology ,Chemistry ,oligopeptide transporter ,Proteins ,030206 dentistry ,Exopeptidase ,biology.organism_classification ,Major facilitator superfamily ,Amino acid ,030104 developmental biology ,Biochemistry ,Diabetes Mellitus, Type 2 ,Periplasm ,diabetes mellitus ,biology.protein ,Energy source - Abstract
Porphyromonas gingivalis, a pathogen of chronic periodontitis, is an asaccharolytic microorganism that solely utilizes nutritional amino acids as its energy source and cellular constituents. The bacterium is considered to incorporate proteinaceous nutrients mainly as dipeptides, thus exopeptidases that produce dipeptides from polypeptides are critical for survival and proliferation. We present here an overview of dipeptide production by P. gingivalis mediated by dipeptidyl-peptidases (DPPs), e.g., DPP4, DPP5, DPP7, and DPP11, serine exopeptidases localized in periplasm, which release dipeptides from the N-terminus of polypeptides. Additionally, two other exopeptidases, acylpeptidyl-oligopeptidase (AOP) and prolyl tripeptidyl-peptidase A (PTP-A), which liberate N-terminal acylated di-/tri-peptides and tripeptides with Pro at the third position, respectively, provide polypeptides in an acceptable form for DPPs. Hence, a large fraction of dipeptides is produced from nutritional polypeptides by DPPs with differential specificities in combination with AOP and PTP-A. The resultant dipeptides are then incorporated across the inner membrane mainly via a proton-dependent oligopeptide transporter (POT), a member of the major facilitator superfamily. Recent studies also indicate that DPP4 and DPP7 directly link between periodontal and systemic diseases, such as type 2 diabetes mellitus and coagulation abnormality, respectively. Therefore, these dipeptide-producing and incorporation molecules are considered to be potent targets for prevention and treatment of periodontal and related systemic diseases., Molecular Oral Microbiology, 36(2), pp. 145-156; 2021
- Published
- 2020
28. Oligopeptide transporter Slc15A modulates macropinocytosis in Dictyostelium by maintaining intracellular nutrient status.
- Author
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Yiwei Zhang, Hui Tu, Yazhou Hao, Dong Li, Yihong Yang, Ye Yuan, Zhonglong Guo, Lei Li, Haibin Wang, and Huaqing Cai
- Subjects
- *
DICTYOSTELIUM , *DICTYOSTELIUM discoideum , *EXTRACELLULAR fluid , *AMINO acids , *GENETIC testing - Abstract
Macropinocytosis mediates non-selective bulk uptake of extracellular fluid. It is the major route by which axenic Dictyostelium cells obtain nutrients and has emerged as a nutrient-scavenging pathway in mammalian cells. How environmental and cellular nutrient status modulates macropinocytic activity is not well understood. By developing a high-content imaging-based genetic screen in Dictyostelium discoideum we identified Slc15A, an oligopeptide transporter located at the plasma membrane and early macropinosome, as a novel macropinocytosis regulator. We show that deletion of slc15A but not two other related slc15 genes, leads to reduced macropinocytosis, reduced cell growth and aberrantly increased autophagy in cells grown in nutrient-rich medium. Expression of Slc15A protein or supplying cells with free amino acids rescues these defects. In contrast, expression of transport-defective Slc15A or supplying cells with amino acids in their di-peptide forms fails to rescue these defects. Therefore, Slc15A modulates the level of macropinocytosis by maintaining the intracellular availability of key amino acids through extraction of oligopeptides from the early macropinocytic pathway. We propose that Slc15A constitutes part of a positive feedback mechanism coupling cellular nutrient status and macropinocytosis. [ABSTRACT FROM AUTHOR]
- Published
- 2022
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- View/download PDF
29. Design and Synthesis of Amide Isosteres of Phe-Gly: Potential Peptidomimetic Ligands for the Intestinal Oligopeptide Transporter PepT1
- Author
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Våbenø, Jon, Brisander, Magnus, Chen, Weiqing, Borchardt, Ronald T., Luthman, Kristina, Lebl, Michal, editor, and Houghten, Richard A., editor
- Published
- 2001
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- View/download PDF
30. Expression and function of PEPT2 during transdifferentiation of alveolar epithelial cells.
- Author
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Takano, Mikihisa, Horiuchi, Taishi, Sasaki, Yoshihiro, Kato, Yuki, Nagai, Junya, and Yumoto, Ryoko
- Subjects
- *
EPITHELIAL cells , *PEPTIDES , *CELL differentiation , *POLYMERASE chain reaction , *CELL culture , *LABORATORY rats , *MESSENGER RNA , *CARRIER proteins - Abstract
Abstract: Aims: The purpose of this study was to clarify the expression and function of peptide transporter 2 (PEPT2) in primary cultured alveolar type II epithelial cells and in transdifferentiated type I-like cells. Main methods: Real-time PCR analysis, uptake study of [3H]Gly-Sar, and immunostaining were performed in alveolar epithelial cells. Key findings: The expression of PEPT2 mRNA in type II cells isolated from rat lungs was highest at day 0, and decreased rapidly during culture of the cells. In accordance with this change, PEPT2 activity estimated as cefadroxil-sensitive [3H]Gly-Sar uptake also decreased along with transdifferentiation. The expression of PEPT2 protein in type II cells was confirmed by immunostaining and Western blot analysis. The uptake of [3H]Gly-Sar in type II cells was time- and pH-dependent. In contrast, minimal time-dependence and no pH-dependence of [3H]Gly-Sar uptake were observed in type I-like cells. The maximal [3H]Gly-Sar uptake was observed at pH6.0, and the uptake decreased at higher pHs in type II cells. The uptake of [3H]Gly-Sar in type II cells was inhibited by cefadroxil in a concentration-dependent manner, the IC50 value being 4.3μM. On the other hand, no significant inhibition by cefadroxil was observed in type I-like cells. In addition, [3H]Gly-Sar uptake in type II cells was saturable, the Km value being 72.0μM. Significance: PEPT2 is functionally expressed in alveolar type II epithelial cells, but the expression decreases along with transdifferentiation, and PEPT2 would be almost completely lost in type I cells. [Copyright &y& Elsevier]
- Published
- 2013
- Full Text
- View/download PDF
31. Characterization of oligopeptide transporter (PepT1) in grass carp (Ctenopharyngodon idella)
- Author
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Liu, Zhen, Zhou, Yi, Feng, Junchang, Lu, Shuangqing, Zhao, Qiong, and Zhang, Jianshe
- Subjects
- *
OLIGOPEPTIDES , *CTENOPHARYNGODON idella , *BRUSH border membrane , *EPITHELIUM , *ANTISENSE DNA , *LOW-protein diet - Abstract
Abstract: The oligopeptide transporter (PepT1) is located on the brush-border membrane of the intestinal epithelium, and plays an important role in dipeptide and tripeptide absorptions from protein digestion. In this study, we cloned the PepT1 cDNA from grass carp and characterized its expression profile in response to dietary protein and feed additives (sodium butyrate) treatments. The PepT1 gene encodes a protein of 714 amino acids with high sequence similarity with other vertebrate homologues. Expression analysis revealed highest levels of PepT1 mRNA expression in the foregut of grass carp. In addition, PepT1 mRNA expression exhibited diurnal variation in all three bowel segments of intestine with lower levels of expression in daytime than nighttime. During embryonic development, PepT1 showed a dynamic pattern of expression reaching maximal levels of expression in the gastrula stage and minimal levels in the organ stage. The PepT1 expression showed constant levels from 14 to 34day post-hatch. To determine whether fish diet of different protein contents may have any effect on PepT1 expression, we extended our research to dietary regulation of PepT1 expression. We found that dietary protein levels had a significant effect on PepT1 gene expression. In addition, PepT1 mRNA levels were higher after feeding with fish meal than with soybean meal. Moreover, in vitro and in vivo sodium butyrate treatments increased PepT1 expression in the intestine of grass carp. The results demonstrate for the first time that PepT1 mRNA expression is regulated in a temporal and spatial pattern during development, and dietary protein and feed additives had a significant effects on PepT1 gene expression in grass carp. [Copyright &y& Elsevier]
- Published
- 2013
- Full Text
- View/download PDF
32. Escherichia coli Peptide Binding Protein OppA Has a Preference for Positively Charged Peptides
- Author
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Klepsch, M.M., Kovermann, M., Löw, C., Balbach, J., Permentier, H.P., Fusetti, F., de Gier, J.W., Slotboom, D.J., and Berntsson, R.P. -A.
- Subjects
- *
ESCHERICHIA coli , *PROTEIN binding , *CARRIER proteins , *SALMONELLA typhimurium , *TANDEM mass spectrometry , *CALORIMETRY , *SYMMETRY (Biology) , *VOLUMETRIC analysis - Abstract
Abstract: The Escherichia coli peptide binding protein OppA is an essential component of the oligopeptide transporter Opp. Based on studies on its orthologue from Salmonella typhimurium, it has been proposed that OppA binds peptides between two and five amino acids long, with no apparent sequence selectivity. Here, we studied peptide binding to E. coli OppA directly and show that the protein has an unexpected preference for basic peptides. OppA was expressed in the periplasm, where it bound to available peptides. The protein was purified in complex with tightly bound peptides. The crystal structure (up to 2.0 Å) of OppA liganded with the peptides indicated that the protein has a preference for peptides containing a lysine. Mass spectrometry analysis of the bound peptides showed that peptides between two and five amino acids long bind to the protein and indeed hinted at a preference for positively charged peptides. The preference of OppA for peptides with basic residues, in particular lysines, was corroborated by binding studies with peptides of defined sequence using isothermal titration calorimetry and intrinsic protein fluorescence titration. The protein bound tripeptides and tetrapeptides containing positively charged residues with high affinity, whereas related peptides without lysines/arginines were bound with low affinity. A structure of OppA in an open conformation in the absence of ligands was also determined to 2.0 Å, revealing that the initial binding site displays a negative surface charge, consistent with the observed preference for positively charged peptides. Taken together, E. coli OppA appears to have a preference for basic peptides. [Copyright &y& Elsevier]
- Published
- 2011
- Full Text
- View/download PDF
33. Control of aerial mycelium formation by the BldK oligopeptide ABC transporter in Streptomyces griseus.
- Author
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Akanuma, Genki, Ueki, Masayoshi, Ishizuka, Morio, Ohnishi, Yasuo, and Horinouchi, Sueharu
- Subjects
- *
MYCELIUM , *HYPHAE of fungi , *OLIGOPEPTIDES , *ADENOSINE triphosphate , *STREPTOMYCES griseus - Abstract
An oligopeptide permease family ATP-binding cassette (ABC) transporter encoded by SGR2418-SGR2414 was shown to be essential for aerial mycelium formation on glucose-containing media in Streptomyces griseus. In spite of only weak sequence similarity, the operon was equivalent to the bldK operon of Streptomyces coelicolor A3(2) in terms of chromosomal location and function. Transcription of the operon appeared not to be directly regulated by AdpA, a global regulator of morphological and physiological development in S. griseus, although it was affected by adpA inactivation. This study revealed that an ABC transporter was essential for aerial mycelium formation not only in S. coelicolor A3(2) but also in S. griseus, indicating that extracellular signaling by certain peptides should be conserved among different Streptomyces species. [ABSTRACT FROM AUTHOR]
- Published
- 2011
- Full Text
- View/download PDF
34. Expression of the oligopeptide transporter, PepT1, in larval Atlantic cod (Gadus morhua)
- Author
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Amberg, J.J., Myr, C., Kamisaka, Y., Jordal, A.-E.O., Rust, M.B., Hardy, R.W., Koedijk, R., and Rønnestad, I.
- Subjects
- *
OLIGOPEPTIDES , *IN situ hybridization , *ATLANTIC cod , *ZOOPLANKTON , *FRESHWATER zooplankton - Abstract
Abstract: The intestinal absorption of di- and tri-peptides generally occurs via the oligopeptide transporter, PepT1. This study evaluates the expression of PepT1 in larval Atlantic cod (Gadus morhua) during the three weeks following the onset of exogenous feeding. Larval Atlantic cod were fed either wild captured zooplankton or enriched rotifers. cDNA was prepared from whole cod larvae preceding first feeding and at 1000 each Tuesday and Thursday for the following three weeks. Spatial and temporal expression patterns of PepT1 mRNA were compared between fish consuming the two prey types using in situ hybridization and quantitative real-time PCR. Results indicated that PepT1 mRNA was expressed prior to the onset of exogenous feeding. In addition, PepT1 was expressed throughout the digestive system except the esophagus and sphincter regions. Expression slightly increased following first-feeding and continued to increase throughout the study for larvae feeding on both prey types. When comparing PepT1 expression in larvae larger than 0.15-mg dry mass with expression levels in larvae prior to feeding, no differences were detected for larvae fed rotifers, but the larvae fed zooplankton had significantly greater PepT1 expression at the larger size. In addition, PepT1 expression in the zooplankton fed larvae larger than 0.15-mg dry mass had significantly greater expression than rotifer fed larvae of a similar weight. Switching prey types did not affect PepT1 expression. These results indicate that Atlantic cod PepT1 expression was slightly different relative to dietary treatment during the three weeks following first-feeding. In addition, PepT1 may play an important role in the larval nutrition since it is widely expressed in the digestive tract. [Copyright &y& Elsevier]
- Published
- 2008
- Full Text
- View/download PDF
35. The PDZ domain protein PDZK1 interacts with human peptide transporter PEPT2 and enhances its transport activity.
- Author
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Noshiro, R, Anzai, N, Sakata, T, Miyazaki, H, Terada, T, Shin, H J, He, X, Miura, D, Inui, K, Kanai, Y, and Endou, H
- Subjects
- *
RENAL pharmacology , *PEPTIDES , *KIDNEY tubules , *KIDNEYS , *NEPHROLOGY - Abstract
The proton-coupled peptide transporter PEPT2 (SLC15A2) mediates the high-affinity low-capacity transport of small peptides as well as various oral peptide-like drugs in the kidney. In contrast to its well-characterized transport properties, there is less information available on its regulatory mechanism, although the interaction of PEPT2 to the PDZ (PSD-95, DglA, and ZO-1)-domain protein PDZK1 has been preliminarily reported. To examine whether PDZK1 is a physiological partner of PEPT2 in kidneys, we started from a yeast two-hybrid screen of a human kidney cDNA library with the C-terminus of PEPT2 (PEPT2 C-terminus (PEPT2-CT)) as bait. We could identify PDZK1 as one of the positive clones. This interaction requires the PDZ motif of PEPT2-CT detected by a yeast two-hybrid assay, in vitro binding assay and co-immunoprecipitation. The binding affinities of second and third PDZ domains of PDZK1 to PEPT2-CT were measured by surface plasmon resonance. Co-immunoprecipitation using human kidney membrane fraction and localization of PEPT2 in renal apical proximal tubules revealed the physiological meaning of this interaction in kidneys. Furthermore, we clarified the mechanism of enhanced glycylsarcosine (Gly-Sar) transport activity in PEPT2-expressing HEK293 cells after the PDZK1 coexpression. This augmentation was accompanied by a significant increase in the Vmax of Gly-Sar transport via PEPT2 and it was also associated with the increased surface expression level of PEPT2. These results indicate that the PEPT2–PDZK1 interaction thus plays a physiologically important role in both oligopeptide handling as well as peptide-like drug transport in the human kidney.Kidney International (2006) 70, 275–282. doi:10.1038/sj.ki.5001522; published online 31 May 2006 [ABSTRACT FROM AUTHOR]
- Published
- 2006
- Full Text
- View/download PDF
36. Measurement of electric current evoked by substrate transport via bi-directional H+/oligopeptide transporter over-expressed in HeLa cells: Electrogenic efflux and existence of a newly observed channel-like state
- Author
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Fujisawa, Yuki, Kitagawa, Taku, Miyake, Michihisa, Nara, Toshifumi, Kamo, Naoki, and Miyauchi, Seiji
- Subjects
- *
ELECTRIC currents , *HELA cells , *CANCER cells , *CRITICAL currents - Abstract
Abstract: In the present study, we measured an electric current induced by substrate transport in a HeLa cell over-expressing a human intestinal di/tri-peptide transporter using the whole-cell patch–clamp technique. Gly-Sar, a typical substrate, induced an inward current associated with its uptake, which showed concentration-dependency following Michaelis–Menten-type kinetics with an apparent K 0.5 of 1.3mM as well as voltage-dependency. An outward current accompanying the efflux of Gly-Sar was also observed after washing out the cell. This outward current was voltage-dependent and was reduced by the inward proton gradient. In the case of hydrophobic dipeptides such as Gly-Phe and Gly-Leu, a distinctive current was observed: after washing out the cells, no outward current was observed, but rather, an ‘inward leak’ current was sustained in spite of the absence of transportable substrate. This leaky current was abolished by the perfusion of Gly-Sar and subsequent washing. It is considered that the hydrophobic substrate sticks within the substrate-binding site and causes the newly observed state, or the ‘inward leak’ current. [Copyright &y& Elsevier]
- Published
- 2006
- Full Text
- View/download PDF
37. The SAT1 flipper, an optimized tool for gene disruption in Candida albicans
- Author
-
Reuß, Oliver, Vik, Åshild, Kolter, Roberto, and Morschhäuser, Joachim
- Subjects
- *
CANDIDA albicans , *GENETICS , *NUTRITION , *GENOMES - Abstract
The construction of Candida albicans mutants by targeted gene disruption usually depends on the use of nutritional markers for the selection of prototrophic transformants from auxotrophic host strains, but it is becoming increasingly evident that this strategy may cause difficulties in the interpretation of mutant phenotypes. Here, we describe a new method for inactivating both alleles of a target gene in C. albicans wild-type strains to obtain homozygous null mutants. The SAT1 flipping method relies on the use of a cassette that contains a dominant nourseothricin resistance marker (caSAT1) for the selection of integrative transformants and a C. albicans-adapted FLP gene that allows the subsequent excision of the cassette, which is flanked by FLP target sequences, from the genome. Two rounds of integration/excision generate homozygous mutants that differ from the wild-type parent strain only by the absence of the target gene, and reintegration of an intact gene copy for complementation of mutant phenotypes is performed in the same way. Transformants are obtained after only 1 day of growth on a selective medium, and integration into the target locus occurs with high specificity after adding homologous flanking sequences on both sides of the cassette. FLP-mediated excision of the SAT1 flipper cassette is achieved by simply growing the transformants for a few hours in medium without selective pressure, and nourseothricin-sensitive (NouS) derivatives can easily be identified by their slower growth on indicator plates containing a low concentration of nourseothricin. We demonstrate the use of the system by deleting the OPT1 gene, which encodes an oligopeptide transporter, in the C. albicans model strain SC5314. The null mutants became resistant to the toxic peptide KLLEth, and reintroduction of an intact OPT1 copy restored susceptibility. The SAT1 flipping method provides a highly efficient method for gene disruption in C. albicans wild-type strains, which eliminates currently encountered problems in the genetic analysis of this important human fungal pathogen. [Copyright &y& Elsevier]
- Published
- 2004
- Full Text
- View/download PDF
38. Mechanism of a model dipeptide transport across blood-ocular barriers following systemic administration
- Author
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Atluri, Harisha, Anand, Banmeet S., Patel, Jignesh, and Mitra, Ashim K.
- Subjects
- *
OLIGOPEPTIDES , *VITREOUS humor , *AQUEOUS humor , *RETINA - Abstract
The purposes of this study were to provide functional evidence for the presence of a peptide transporter on blood-ocular barriers and to elucidate the mechanism of a dipeptide transport across these barriers following systemic administration. Glycylsarcosine was chosen as a model dipeptide and [3H] glycylsarcosine was administered through the marginal ear vein of New Zealand white rabbits. At the end of an experimental period, vitreous humor, retina and aqueous humor were collected. Time dependent uptake of glycylsarcosine into ocular tissues was studied at 5, 10, 15 and 30 min. Competitive inhibition studies were performed by intravenous administration of [3H] glycylsarcosine with and without various inhibitors. Concentration-dependent ocular uptake of glycylsarcosine was carried out by administration of various concentrations of unlabelled glycylsarcosine spiked with a fixed amount of [3H] glycylsarcosine. Time-dependent uptake of glycylsarcosine into vitreous humor, retina and aqueous humor for a period of 30 min following systemic administration was linear. Ocular uptake of glycylsarcosine was inhibited by peptide transporter substrates such as dipeptides (glycylproline and carnosine) and captopril but not by non-substrates such as amino acids. Concentration-dependent self-inhibition of glycylsarcosine ocular uptake was also observed. The results indicate that model dipeptide is transported across blood-ocular barriers via a carrier-mediated process. In conclusion, an oligopeptide transport system is involved in the transport of glycylsarcosine across blood-ocular barriers. This information may be utilized to design transporter/receptor targeted drug delivery systems for efficient ocular uptake from systemic administration. [Copyright &y& Elsevier]
- Published
- 2004
- Full Text
- View/download PDF
39. Functional characterization and expression analysis of a glutathione transporter, BjGT1, from Brassica juncea: evidence for regulation by heavy metal exposure.
- Author
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Bogs, J., Bourbouloux, A., Cagnac, O., Wachter, A., Rausch, T., and Delrot, S.
- Subjects
- *
GLUTATHIONE , *BRASSICA , *EFFECT of heavy metals on plants - Abstract
ABSTRACT Glutathione and its derivatives play an important role in the tolerance of plants against heavy metals. A glutathione transporter, BjGT1 (AJ561120), was cloned and functionally characterized from Brassica juncea, a plant which may be used for phytoremediation. The full-length BjGT1 cDNA showed homology with the high affinity glutathione transporter HGT1 from Saccharomyces cerevisiae and shares 92% identity with a putative glutathione transporter from A. thaliana (At4g16370). When expressed in the S. cerevisiae hgt1 Δ strain, BjGT1 complemented the mutant on medium with glutathione as the only sulphur source and mediated the uptake of [[sup 3] H]GSH. Immunoblot analysis with a peptide-specific antiserum directed against a C-terminal sequence revealed high BjGT1 expression in leaf tissue and relatively low expression in stem tissue, whereas BjGT1 protein was not detectable in root tissue. The amounts of BjGT1 mRNA and protein were analysed during a 6 d exposure of B. juncea to 25 µ m Cd(NO[sub 3] )[sub 2] . BjGT1 mRNA was strongly induced by cadmium in stems and leaves. Unexpectedly, the amount of BjGT1 protein in leaves showed a pronounced decrease with a minimum after 96 h of Cd exposure, followed by partial recovery. The strong regulation of BjGT1 by cadmium suggests a role of this glutathione transporter during heavy metal exposure. [ABSTRACT FROM AUTHOR]
- Published
- 2003
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40. Transport characteristics of peptides and peptidomimetics: II. Hydroxyethylamine bioisostere-containing peptidomimetics as substrates for the oligopeptide transporter and P-glycoprotein in the intestinal mucosa: Authors' affiliations:.
- Author
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Gao, J., Winslow, S.L., vander Velde, D., Borchardt, R.T., and Aubé, J.
- Subjects
- *
PEPTIDES , *OLIGOPEPTIDES , *GLYCOPROTEINS , *PHYSIOLOGY - Abstract
Abstract: Peptide bond bioisosteres, such as hydroxyethylamine (Hea), have frequently been used to stabilize metabolically labile peptide bonds in peptidomimetic drug design in an effort to increase the oral bioavailability of drug candidates. However, the impact of the peptide bond bioisosteres on the cell permeation characteristics of peptidomimetics is not well understood, particularly with respect to the effects on the substrate activity for proteins that can restrict (e.g. P-glycoprotein, P-gp) or facilitate (e.g. the oligopeptide transporter, OPT) intestinal mucosal permeation of peptidomimetics. In this study, terminally free and terminally modified (N-acetylated and C-amidated) peptidomimetics of H-Ala-Phe-OH and H-Ala-Phe-Ala-OH with the Ala-Phe peptide bonds replaced by Hea bioisosteres were synthesized. Transport characteristics of these peptidomimetics were investigated using Caco-2 cell monolayers as an in vitro model of the intestinal mucosa. The study showed that the Hea bioisostere stabilized the peptidomimetics to protease metabolism in Caco-2 cells. All terminally free peptidomimetics showed significant affinity and substrate activity for OPT. The affinity and substrate activity for OPT were stereoselective for peptidomimetics containing an S,S-configuration for the two adjacent chiral centers related to the Hea bioisostere. Three of the four terminally modified peptidomimetics showed significant substrate activity for P-gp and, interestingly, the substrate activity for P-gp was also stereoselective; however, it was in favor of an R,R-configuration for the two adjacent chiral centers related to the Hea bioisostere. [ABSTRACT FROM AUTHOR]
- Published
- 2001
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- View/download PDF
41. Transport characteristics of peptides and peptidomimetics: I. N-methylated peptides as substrates for the oligopeptide transporter and P-glycoprotein in the intestinal mucosa: Authors' affiliations:.
- Author
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Gao, J., Sudoh, M., Borchardt, R.T., and Aubé, J.
- Subjects
- *
PEPTIDES , *OLIGOPEPTIDES , *GLYCOPROTEINS , *INTESTINAL mucosa , *PHYSIOLOGY - Abstract
Abstract: Peptides and peptidomimetics often exhibit poor oral bioavailability due to their metabolic instability and low permeation across the intestinal mucosa. N-Methylation has been used successfully in peptide-based drug design in an attempt to improve the metabolic stability of a peptide-based lead compound. However, the effect of N-methylation on the absorption of peptides through the intestinal mucosa is not well understood, particularly when transporters, i.e. the oligopeptide transporter (OPT) and P-glycoprotein (P-gp), modulate the passive diffusion of these types of molecules. To examine this, terminally free and terminally modified (N-acetylated and C-amidated) analogs of H-Ala-Phe-Ala-OH with N-methyl groups on either the Ala-Phe or Phe-Ala peptide bond were synthesized. Transport studies using Caco-2 cell monolayers, an in vitro model of the intestinal mucosa, showed that N-methylation of the Ala-Phe peptide bond of H-Ala-Phe-Ala-OH stabilized the molecule to protease degradation, and the resulting analog exhibited significant substrate activity for OPT. However, N-methylation of the Phe-Ala peptide bond of H-Ala-Phe-Ala-OH did not stabilize the molecule to protease degradation, and the substrate activity of the resulting molecule for OPT could not be determined. Interestingly, N-methylation of the Phe-Ala peptide bond of the terminally modified tripeptide Ac-Ala-Phe-Ala-NH[sub 2] decreased the substrate activity of the molecule for the efflux transporter P-gp. In contrast, N-methylation of the Ala-Phe peptide bond of the terminally modified tripeptide Ac-Ala-Phe-Ala-NH[sub 2] increased the substrate activity of the molecule for P-gp. [ABSTRACT FROM AUTHOR]
- Published
- 2001
- Full Text
- View/download PDF
42. Oligopeptide transporter Slc15A modulates macropinocytosis in Dictyostelium by maintaining intracellular nutrient status.
- Author
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Zhang Y, Tu H, Hao Y, Li D, Yang Y, Yuan Y, Guo Z, Li L, Wang H, and Cai H
- Subjects
- Animals, Endosomes, Humans, Mammals, Nutrients, Oligopeptides, Pinocytosis, Dictyostelium genetics
- Abstract
Macropinocytosis mediates non-selective bulk uptake of extracellular fluid. It is the major route by which axenic Dictyostelium cells obtain nutrients and has emerged as a nutrient-scavenging pathway in mammalian cells. How environmental and cellular nutrient status modulates macropinocytic activity is not well understood. By developing a high-content imaging-based genetic screen in Dictyostelium discoideum we identified Slc15A, an oligopeptide transporter located at the plasma membrane and early macropinosome, as a novel macropinocytosis regulator. We show that deletion of slc15A but not two other related slc15 genes, leads to reduced macropinocytosis, reduced cell growth and aberrantly increased autophagy in cells grown in nutrient-rich medium. Expression of Slc15A protein or supplying cells with free amino acids rescues these defects. In contrast, expression of transport-defective Slc15A or supplying cells with amino acids in their di-peptide forms fails to rescue these defects. Therefore, Slc15A modulates the level of macropinocytosis by maintaining the intracellular availability of key amino acids through extraction of oligopeptides from the early macropinocytic pathway. We propose that Slc15A constitutes part of a positive feedback mechanism coupling cellular nutrient status and macropinocytosis. This article has an associated First Person interview with the first authors of the paper., Competing Interests: Competing interests The authors declare no competing or financial interests., (© 2022. Published by The Company of Biologists Ltd.)
- Published
- 2022
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43. Expression, Regulation, and Role of an Oligopeptide Transporter: PEPT1 in Tumors.
- Author
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Wang X, Chen Y, Wang Y, Wang B, Zhang J, and Jian X
- Subjects
- Humans, Oligopeptides, Peptide Transporter 1 metabolism, Protons, Membrane Transport Proteins, Neoplasms diagnosis, Neoplasms drug therapy
- Abstract
PEPT1 is a vital member of the proton-dependent oligopeptide transporters family (POTs). Many studies have confirmed that PEPT1 plays a critical role in the absorption of dipeptides, tripeptides, and pseudopeptides in the intestinal tract. In recent years, several studies have found that PEPT1 is highly expressed in malignant tumor tissues and cells. The abnormal expression of PEPT1 in tumors may be closely related to the progress of tumors, and hence, could be considered as a potential molecular biomarker for the diagnosis, treatment, and prognosis in malignant tumors. Furthermore, PEPT1 can be used to mediate the targeted delivery of anti-tumor drugs. Herein, the expression, regulation, and role of PEPT1 in tumors in recent years have been reviewed., (Copyright© Bentham Science Publishers; For any queries, please email at epub@benthamscience.net.)
- Published
- 2022
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44. Function and transcriptome analysis of an oligopeptide transporter CgOPT2 in the rubber anthracnose fungus Colletotrichum gloeosporioides.
- Author
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Li, Xiaoyu, Liu, Shayu, Zhang, Nan, and Liu, Zhiqiang
- Subjects
- *
COLLETOTRICHUM gloeosporioides , *COLLETOTRICHUM , *ANTHRACNOSE , *AMINO acid metabolism , *RUBBER , *CARRIER proteins , *CELLULAR signal transduction - Abstract
Colletotrichum gloeosporioides is a main pathogen causing rubber anthracnose, which brings huge economic loss to natural rubber industry. Oligopeptide transporter (OPT) is a kind of peptide transport protein, which usually exhibits various biological functions in fungi. In this study, an oligopeptide transporter gene CgOPT2 is identified from the rubber anthracnose fungus C. gloeosporioides as a homolog of OPT2 in Saccharomyces cerevisiae. CgOPT2 encodes a 990-amino acid protein, which has an OPT domain harboring 15 transmembrane domains. The gene knock-out mutant of CgOPT2 had reduced vegetative growth on PDA and CM media, and was more sensitive to H 2 O 2 , SDS and Congo Red than the wild-type strain. Moreover, the mutant had obviously lagged conidia germination and attenuated virulence on rubber leaves. Transcriptome analysis showed CgOPT2 could affect the expression of many genes involved in cellular transport, amino acid metabolism and signal transduction, etc. In conclusion, CgOPT2 is an important oligopeptide transporter of C. gloeosporioides , which participates in the process of vegetative growth, cell wall integrity, oxidative stress, conidia germination and pathogenicity. • A new oligopeptide transporter CgOPT2 was cloned and characterized from Colletotrichum gloeosporioides. • CgOPT2 regulates vegetative growth, cell wall integrity, conidial germination and pathogenicity of C. gloeosporioides. • CgOPT2 affects the expression of many genes related to cellular transport, amino acid metabolism and signal transduction. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
45. Preferential dipeptide incorporation of Porphyromonas gingivalis mediated by proton-dependent oligopeptide transporter (Pot)
- Author
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Yuko Ohara-Nemoto, Takeshi Kobayakawa, Mohammad Tanvir Sarwar, Takayuki K. Nemoto, and Yu Shimoyama
- Subjects
medicine.disease_cause ,Microbiology ,proton-dependent oligopeptide transporter ,Serine ,03 medical and health sciences ,chemistry.chemical_compound ,Bacterial Proteins ,Genetics ,medicine ,Molecular Biology ,Porphyromonas gingivalis ,Escherichia coli ,030304 developmental biology ,serine/threonine transporter ,0303 health sciences ,Oligopeptide ,Dipeptide ,biology ,030302 biochemistry & molecular biology ,oligopeptide transporter ,Membrane Transport Proteins ,Biological Transport ,Transporter ,Dipeptides ,Periplasmic space ,biology.organism_classification ,dipeptidyl-peptidase ,Biochemistry ,chemistry ,Heterologous expression ,dipeptide - Abstract
Multiple dipeptidyl-peptidases (DPPs) are present in the periplasmic space of Porphyromonas gingivalis, an asaccharolytic periodontopathic bacterium. Dipeptides produced by DPPs are presumed to be transported into the bacterial cells and metabolized to generate energy and cellular components. The present study aimed to identify a transporter responsible for dipeptide uptake in the bacterium. A real-time metabolic analysis demonstrated that P. gingivalis preferentially incorporated Gly-Xaa dipeptides, and then,single amino acids, tripeptides, and longer oligopeptides to lesser extents. Heterologous expression of the P. gingivalis serine/threonine transporter (SstT) (PGN_1460), oligopeptide transporter (Opt) (PGN_1518), and proton-dependent oligopeptide transporter (Pot) (PGN_0135) genes demonstrated that Escherichia coli expressing Pot exclusively incorporated Gly-Gly, while SstT managed Ser uptake and Opt was responsible for Gly-Gly-Gly uptake. Dipeptide uptake was significantly decreased in a P. gingivalis Δpot strain and further suppressed in a Δpot-Δopt double-deficient strain. In addition, the growth of the Δpot strain was markedly attenuated and the Δpot-Δopt strain scarcely grew, whereas the ΔsstT strain grew well almost like wild type. Consequently, these results demonstrate that predominant uptake of dipeptide in P. gingivalis is mostly managed by POT. We thus propose that Pot is a potential therapeutic target of periodontal disease and P. gingivalis related systemic diseases., FEMS Microbiology Letters, article in press
- Published
- 2020
46. Sequence Alignments of the H+-Dependent Oligopeptide Transporter Family PTR: Inferences on Structure and Function of the Intestinal PET1 Transporter.
- Author
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Graul, Richard and Sadée, Wolfgang
- Abstract
Purpose. To study the structure and function of the intestinal H
+ / peptide transporter PET1, we compared its amino acid sequence with those of related transporters belonging to the oligopeptide transporter family PTR, and with more distant transporter families. Methods. We have developed a new approach to the sequence analysis of proteins with multiple transmembrane domains (TMDs) which takes into account the repeated TMD-loop topology. In addition to conventional analyses of the entire sequence, each TMD and its adjacent loop residues (=TMD segments) were analyzed separately as independent structural units. In combination with hydropathy analysis, this approach reveals any changes in the order of the TMD segments in the primary structure and permits TMD alignments among divergent structures even if rearrangements of the order of TMD segments have occurred in the course of evolution. Results. Alignments of TMD segments indicate that the TMD order in PTR transporters may have changed in the process of evolution. Consideration of such changes permits the alignment of homologous TMD segments from PTR transporters belonging to distant akaryotic and eukaryotic phyla. Multiple alignments of TMDs reveal several highly conserved regions that may play a role in transporter function. In comparing the PTR transporters with other transporter gene families, alignment scores using the entire primary structure are too low to support a finding of probable homology. However, statistically significant alignments were observed among individual TMD segments if one disregards the order in which they occur in the primary structure. Conclusions. Our results support the hypothesis that the PTR transporters may have evolved by rearrangement, duplication, or insertions and deletions of TMD segments as independent modules. This modular structure suggests new alignment strategies for determining functional domains and testing relationships among distant transporter families. [ABSTRACT FROM AUTHOR]- Published
- 1997
- Full Text
- View/download PDF
47. Metabolism, Uptake, and Transepithelial Transport of the Stereoisomers of Val-Val-Val in the Human Intestinal Cell Line, Caco-2.
- Author
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Tamura, Kiyoshi, Lee, Chao-Pin, Smith, Philip, and Borchardt, Ronald
- Abstract
Purpose. The purpose of this study was to determine the stereospecificity of the apical oligopeptide transporter(s) for the stereoisomers of Val-Val-Val and to determine whether the interaction of these molecules with this transporter(s) could be correlated with their cellular uptake and/or transepithelial transport. Methods. The interactions of these stereoisomers with this transporter(s) were evaluated by determining their ability to inhibit [H]cephalexin uptake into Caco-2 cells. The metabolism of these stereoisomers was determined in a homogenate of Caco-2 cells and in the apical bathing solution over Caco-2 cell monolayers. The cellular uptake and transepithelial transport properties of these stereoisomers were studied using the Caco-2 cell monolayers. Results. The L-L-L tripeptide was totally degraded within 1 h in the Caco-2 cell homogenate and within 2 h when applied to the apical side of a Caco-2 cell monolayer. In contrast, 36.7 ± 1.3% and 69.7 ± 0.9% of L-Val-L-Val-D-Val remained after 2 h in the cell homogenate and in the apical bathing solution, respectively. The other six stereoisomers of Val-Val-Val were completely stable in the Caco-2 cell homogenate. Five of the stereoisomers (L-L-L, L-L-D, L-D-L, D-L-L, D-D-L) significantly inhibited the cellular uptake of [H]cephalexin (91%, 62%, 14%, 45%, 16%, respectively). The other stereoisomers had no effect on the [H]cephalexin uptake. When the cellular uptake of the stereoisomers was determined, the D-L-L and L-D-L tripeptides showed the highest intracellular concentrations (1.32 ± 0.25 and 0.62 ± 0.20 nmol/mg protein after a 2-h incubation, respectively). In contrast, the intracellular concentrations of the other stereoisomers were less than 0.1 nmol/mg protein. Moreover, the cellular uptake of the D-L-L and L-D-L tripeptides was inhibited by Gly-Pro by 82% and 68%, respectively, whereas Gly-Pro showed moderate to no inhibitory effect on the cellular uptake of the other stereoisomers. The permeability coefficients of the stereoisomers across the Caco-2 cell monolayers were very low (1.8 to 3.1 × 10 cm/sec) and almost identical. Gly-Pro had no effect on their transepithelial transport. Conclusions. These results suggest that the interaction of the Val-Val-Val stereoisomers with the apical oligopeptide transporter(s) could be a good predictor of their cellular uptake. However, since the major transepithelial transport mechanism of Val-Val-Val stereoisomers is passive diffusion via the paracellular route, the binding of these molecules to the oligopeptide transporter(s) is not a good predictor of their transepithelial transport. It appears that the stereochemical requirements for the transporter that mediates permeation of the peptide across the basolateral membrane may be different from the requirements for the apical transporter that mediates cellular uptake. [ABSTRACT FROM AUTHOR]
- Published
- 1996
- Full Text
- View/download PDF
48. Metabolism, Uptake, and Transepithelial Transport of the Diastereomers of Val-Val in the Human Intestinal Cell Line, Caco-2.
- Author
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Tamura, Kiyoshi, Bhatnagar, Pradip, Takata, Joanne, Lee, Chao-Pin, Smith, Philip, and Borchardt, Ronald
- Abstract
Purpose. The purpose of this study was to determine whether the binding of the diastereomers of Val-Val to the apical oligopeptide transporter(s) could be correlated with their cellular uptake and transepithelial transport. Methods. The Caco-2 cell culture system was used for all experiments. The binding of the diastereomers of Val-Val was evaluated by determining their ability to inhibit [H]cephalexin uptake. The stability of the diastereomers was determined in a homogenate of Caco-2 cells and in the apical bathing solution over Caco-2 cell monolayers. The cellular uptake and transepithelial transport properties of the individual diastereomers were studied using Caco-2 cell monolayers. Results. 10 mM concentrations of L-Val-L-Val, L-Val-D-Val, D-Val-L-Val and D-Val-D-Val inhibited cellular uptake of [H]cephalexin (0.1 mM) by 92%, 37%, 70%, and 18%, respectively. When the cellular uptake of Val-Val diastereomers (1 mM) were evaluated, the intracellular concentrations of L-Val-D-Val and D-Val-L-Val were 15 and 50 times higher, respectively, than that of D-Val-D-Val. The cellular uptake of L-Val-D-Val and D-Val-L-Val was inhibited by Gly-Pro (10 mM) (>95%), whereas Gly-Pro had no effect on the cellular uptake of D-Val-D-Val. L-Val-L-Val was not detected in the Caco-2 cells, probably due to its metabolic lability. When the transepithelial transport of the Val-Val diastereomers (1 mM) was determined, L-Val-D-Val, D-Val-L-Val and D-Val-D-Val transport rates were similar. The transepithelial transport of L-Val-D-Val and D-Val-L-Val was inhibited by Gly-Pro (10 mM) 36% and 30%, respectively, while Gly-Pro inhibited carnosine (1 mM) transepithelial transport by 65%. Gly-Pro had no effect on the transepithelial transport of D-Val-D-Val. Conclusions. These results suggest that the major transepithelial transport route of L-Val-D-Val, D-Val-L-Val and D-Val-D-Val is passive diffusion via the paracellular route. The binding of Val-Val diastereomers to the oligopeptide transporter(s) is a good predictor of their cellular uptake, however, the binding is not a good predictor of their transepithelial transport. It appears that the stereochemical requirements for the transporter that mediates efflux of the peptide across the basolateral membrane may be different from the requirements for the apical transporter that mediates cellular uptake. [ABSTRACT FROM AUTHOR]
- Published
- 1996
- Full Text
- View/download PDF
49. Genome-Wide Identification and Comparative Analysis for OPT Family Genes in Panax ginseng and Eleven Flowering Plants
- Author
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Xu Jiang, Wen Xu, Yang Chu, Zhihai Huang, Juan Huang, Xiaohui Qiu, Lu Gong, He Su, Jing Zhang, and Junqi Bai
- Subjects
0301 basic medicine ,Pharmaceutical Science ,Genomics ,Computational biology ,Biology ,phylogeny ,Genome ,Analytical Chemistry ,lcsh:QD241-441 ,Structural variation ,03 medical and health sciences ,Ginseng ,lcsh:Organic chemistry ,Drug Discovery ,Gene family ,Physical and Theoretical Chemistry ,Panax ginseng ,Gene ,transcription factor ,Comparative genomics ,flowering plant ,Organic Chemistry ,oligopeptide transporter ,food and beverages ,Gene expression profiling ,030104 developmental biology ,Chemistry (miscellaneous) ,Molecular Medicine - Abstract
Herb genomics and comparative genomics provide a global platform to explore the genetics and biology of herbs at the genome level. Panax ginseng C.A. Meyer is an important medicinal plant for a variety of bioactive chemical compounds of which the biosynthesis may involve transport of a wide range of substrates mediated by oligopeptide transporters (OPT). However, information about the OPT family in the plant kingdom is still limited. Only 17 and 18 OPT genes have been characterized for Oryza sativa and Arabidopsis thaliana, respectively. Additionally, few comprehensive studies incorporating the phylogeny, gene structure, paralogs evolution, expression profiling, and co-expression network between transcription factors and OPT genes have been reported for ginseng and other species. In the present study, we performed those analyses comprehensively with both online tools and standalone tools. As a result, we identified a total of 268 non-redundant OPT genes from 12 flowering plants of which 37 were from ginseng. These OPT genes were clustered into two distinct clades in which clade-specific motif compositions were considerably conservative. The distribution of OPT paralogs was indicative of segmental duplication and subsequent structural variation. Expression patterns based on two sources of RNA-Sequence datasets suggested that some OPT genes were expressed in both an organ-specific and tissue-specific manner and might be involved in the functional development of plants. Further co-expression analysis of OPT genes and transcription factors indicated 141 positive and 11 negative links, which shows potent regulators for OPT genes. Overall, the data obtained from our study contribute to a better understanding of the complexity of the OPT gene family in ginseng and other flowering plants. This genetic resource will help improve the interpretation on mechanisms of metabolism transportation and signal transduction during plant development for Panax ginseng.
- Published
- 2018
- Full Text
- View/download PDF
50. The ClpS-like N-domain is essential for the functioning of Ubr11, an N-recognin in Schizosaccharomyces pombe
- Author
-
Kitamura, Kenji
- Published
- 2014
- Full Text
- View/download PDF
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